Oncorhynchus keta (chum salmon): 118391429
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Entry
118391429 CDS
T09424
Name
(RefSeq) splicing regulator ARVCF-like isoform X1
KO
K28154
splicing regulator ARVCF
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118391429
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118391429
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
V-ATPase_H_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
118391429
NCBI-ProteinID:
XP_035638709
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Position
12:complement(36241685..36274590)
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AA seq
880 aa
AA seq
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MPAEVKGEQIPEGPSSLGAMILEPKEPPGEHPLPADDDLDTPTSNTSVVTSTNGSSTTET
QYSEAEDPKAVKLGNDQADTPDTTTLQLPPAPQPPSVPQIPLVSDDPSLKPSPLTNGQHS
SESLTTPITTTVTTNTLPPPYNNTNSEPQTEEPEGQNSAYTLPDPPFPGLGGGMCAGYGS
LSRGGVHQSSLHTYWPSRNYQPQPGGHYTLPLPRDIYGKVGLTNQTEREGPGDDTLGGIH
QLRPITTMELLREPSRTRGGYEEALMSQVDGDPISFFQAMSRAQMLQFPHKRSSMVSLDS
IRKDPRWRDPNLSEVITMLSHPMDPVKSNAAAYLQHLCYENDRIKQDVRQLKGVPVLVGL
LDHPKAEVHRKACGALRNISYGKDHHNKVAIKNCDGIPALVRLLRKSSNMEVTELVTGTL
WNLSSHEPLKMMVINHGLQTLTDEVIIPHSGWRRDLTEHSRPQETEWTTVFKNTSGCLRN
VSSDGAEARQRLRECEGLVDALLHALQSAVANKETDNKSVENCVCILRNLSYHVHKEVPG
AERFQEPVANQVPRSGSGGKKKNEGDCFGGKKPKEEWFNQSWRNGPGDKKYGTLDLPKRT
QPTKGLELLYQPEVVRLYLSLLTRSQNHNTLEAAAGALQNLAAGHWAWSSYIRATVRKEK
GLPVLVELLRSDGDKVVRAVAIALRNLAIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNL
EGDTVVAILNTIHEIISDSPENARGLIQGHGIQKLVAINKTSQSVRETKAASHVLQTVWA
YKDLRNSLYKGGWNKSHFKSTTSGIPKKTKTGKAAYDDITLPLMEKNQDGYSTVELSDRV
GDGLLQVSNTSIPERKHFIRAGRPAVGLVERKPPPLDSWV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaggtgaaaggggagcagatcccagaggggccctcctctctgggggccatg
atcctggagcccaaggagcccccgggggagcatccattgcctgcagatgatgacctggac
acacccacctccaacacctccgtggtcacctccaccaatggcagttccactacagagaca
caatactcagaggcagaggaccccaaggctgttaaactggggaatgaccaagcagacact
ccagacaccaccacccttcagcttcccccagccccgcagcctccctcggttccccagatc
cccttggtttcagacgacccatctctgaagcccagtcctctaaccaacggccaacactcc
tctgagtccctcacaacccctatcacaaccactgttaccaccaacactctccctcctccc
tacaacaacaccaacagtgagccccagacagaggagcctgaagggcagaacagcgcctac
accctccctgaccctccctttcctggcctgggtggtggcatgtgtgctgggtatggcagc
ctgtctcgtggtggtgtccaccagagctccctccacacctactggccctccaggaactac
cagccccagcctgggggtcactacaccctgcccctccccagggacatctacggcaaggtg
ggcctgaccaaccaaaccgagagggaaggaccaggggacgacaccctgggtggaattcac
cagctcagacccatcactaccatggagctcctgagggaaccttccagaaccagaggtgga
tacgaggaggctctcatgtcccaggtggatggggatcccatctccttcttccaggccatg
tccagggcccagatgctacagttcccccacaagcgcagtagcatggtcagcctggacagc
atccgtaaggacccccgctggagggaccccaacctgagtgaggtcatcaccatgctcagc
caccccatggacccggtcaagtccaacgccgccgcctacttgcagcacctgtgctacgag
aacgaccgcataaagcaggacgtcaggcagctaaagggggttccagtactggtgggcctc
ctggaccaccctaaagccgaggtccaccgcaaggcgtgtggagccctgaggaacatctcc
tacgggaaagaccaccacaacaaggtggccatcaagaactgtgacggcatcccggccctg
gtcagactgctgaggaagtccagtaacatggaggtcacagagttggtcacaggaaccctg
tggaatctgtcctcccatgagcctctgaagatgatggtcatcaatcacgggctccagacg
ctgactgatgaggtcatcatcccccactctggctggaggagagacctcactgagcactca
agaccccaggagacagagtggacaaccgtgttcaagaacacctcagggtgtctcaggaat
gtgagctcagatggggcagaggctcgccagaggctgagggagtgtgaggggctggtggac
gctctcctccatgccctacagtcagcggttgccaacaaggagacagacaataagtcagta
gagaactgcgtctgtatcctgagaaacctctcctaccatgtccacaaagaggtgccagga
gcggagcgatttcaggaacccgtagccaatcaggtgccacggtcaggatcaggagggaag
aagaagaatgagggagactgttttggagggaaaaagcccaaggaggagtggttcaatcaa
agctggagaaacggaccaggtgacaaaaaatatggtacactggatttacccaaacgcaca
caaccaacaaaaggtctggagctgctgtaccagccagaggtggtgaggctgtacctgtct
ctcctcactcgcagtcaaaaccacaacaccctggaggcagcagccggagctctgcagaac
cttgctgcaggtcactgggcttggtccagttacatccgggccacagttaggaaggagaaa
ggtctgcctgtcctggtggagctactgcgttcagatggtgataaagtggtccgagctgta
gctattgctctacgcaacctggccatagatcgacggaacaaagacctcataggaagctat
gccatgagggacctggtcagtaacctgcccagtggtcagcagcgaccagccaagaacctg
gaaggggacacagtggtggccattctgaacactatccatgagatcatctcagacagccct
gagaatgcccgtggtctcatacagggtcacggcatccagaaactggtggccatcaacaag
acaagccaatctgtgcgggagaccaaagcagcatctcatgtcctacagacagtgtgggcc
tacaaggacctgagaaatagcctctacaagggaggctggaacaagagccactttaagtca
accactagtggaatacccaaaaaaactaagaccggaaaggcagcctatgatgacatcaca
ctccctctgatggagaaaaaccaagatggatactccaccgtggagctgagtgacagagtg
ggtgatgggttactccaggtcagtaacacgagtatcccagagaggaagcacttcatccgg
gctggaaggcctgcagtgggtctggtggaacgcaaacctccacccctcgattcctgggtc
tga
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