Oncorhynchus keta (chum salmon): 118391431
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Entry
118391431 CDS
T09424
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118391431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118391431
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118391431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
118391431
NCBI-ProteinID:
XP_035638712
LinkDB
All DBs
Position
12:complement(36346182..36414991)
Genome browser
AA seq
2718 aa
AA seq
DB search
MTRNRKKHKKAVGRCEEQLEGDDIEQPVHRHDPHTPIFSMNGDMPHVPITTLAGIASLTD
LLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDENLVSQLAHSLNQVSTEHIELKD
NLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQYKMSQNSMHGSPASTNYQQTT
ISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAAYMQQYPHPPSYSQHQQIQQGS
PQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMRNIHDNKVSGQISSNSANHNAR
HGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSPADSEGNPKAGLRPSLILHSPN
PYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLDKAAMYDIVSSPSKDSTKLTLKLSRV
KSTEMDPSRELLPGAEDQDTDLAYNSLQFSRTQQDLAHRLAPGQGEQSGYQQVPVLQNTK
QAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPG
AGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALMVSIDLQQAGRADGQPEVNIGT
HTPALRSWPEERLCPGDGPDSTGVLRLNSKTEGDTLQTADVRPEVIKQRADTPKKLGPDV
RPETPKHKHENRRDSSKHRHDGKPDNSKVRPDARMPDKPRQRHEGRSDSGHREDRSRDSD
PSRIRRPETPSKSSRGEHDSKHGRDRDRERGDKDRERKHRTEAGDPRDRRSPEQRSRPES
PRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEERRSGDGSRNRQDSKQQPAENK
QEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEMRTPGLGSVVEGWKEPRVKLERLG
LVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSKSSKSRPSHWISEKESTMPLCE
RVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESTRKRHKKEREKTWEPDERRGSGRR
GSGSRHRERSPEDSYDESPPPSMSDLARKMKKKEKQKKRKAYEPKLTAEELMDSSTFKRF
SASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSELASESAKIKAMGITFRLSSGKLV
KVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIMERVTKSADACLTALNIMTSARM
PKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSRAKRAKSSTHKQRVI
IMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVESVSELQLCAIKLVTAVFS
RYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYIQMVTALVLQLIQCVVH
LPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLSVFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDGVT
SKTDQRSIDRILRETQGNDETQQLQKALLDYMDENAETDPSLVFARKFYIAQWFRDTLTE
MEKAMKSQNQRGDEDSSEGQHHAKDIETTGEIMQRAEARKKYLRNIIKTAPSQFSTLRMN
SDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDP
SILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISV
RKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKD
AMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDAAYKPARKACVQLVDNLVEHILK
YEESLTDIENKGVNSNRLVSCITTLFLFSKIRSQLMVKHAMTIQPYLTTKCNTQSDFMVI
CNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNRVTRNYK
FVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALLRSLFTVGALCRHFDFDEEEFKGP
TKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQYPGLMFMQDVMSLYNGILSDRK
SSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISSGMSSSIMQLYLK
QVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKADQQLVE
IDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYRQDETTSALCAHLFSMVRSNRQ
HRRAFLISLLNLFDDSSKIEVNMLLYMADNLACFPYQIQEEPLFIMHHIDITLSVSGSNL
LQSFKESLLKEPRQREKKSKERKYQSEEENSSSSSSSEEEHHRHSISSNSSDEDNEVVHR
PKKPKHRAQAPVESDSDSDLEMEDLDKVMQRLPDNPIPLLDFANASQGILLLLVLKQHLK
NLYGFSDSKIQKYSPTESAKVYEKAVNRKGHVHFSPHQTLDFLTSDLANVELTYDIKRRI
VKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSLLGGPSHQDHKNHHQDHKNHHQ
APIETDDDESDGDEKTPVSSRRSRKHGDSAEASGHMNETLAARDVIALCCPKYKDRPQIA
RIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPWVDTIKESDIIYKKIALTSAHKLT
NRVVQTLRSLYSAKEGTS
NT seq
8157 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaacaggaagaaacacaaaaaagcggtcgggagatgtgaggaacagttggag
ggcgacgacattgagcaacctgtgcatcgacacgacccccacacccctatcttcagcatg
aatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttactgac
ttgttaaaccagctgcccctgccatcccctctccccgccaccaccactaagagtctgctg
ttcaatgggaggattgcggaggaggtcaactgtctgctggcctgccgggatgagaacctg
gtgtcccagctggctcatagcctcaaccaggtttccacagagcacatagagctgaaggac
aacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctgtct
aggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcagtac
aagatgtcccagaattccatgcatgggagtccggcatcgacaaactaccagcaaaccact
atctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccaggttc
acgccccagcagaacagccctgtgcccagcccctatgccccccaaagccctgctgcttac
atgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaaggaagc
ccccagaggcctgtgcagccctgccttgaggtgcagacccagccgcaggcctccccccac
cagaacccctccaccccaaccttagttgccagccccatggttcctggcggcatgcggaac
atccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgccaga
catggctccaacgaagactacatgaacatagtccacagattagggaatgaggagagtgat
ccttccatgagaaatgcctccttcccactccgttcgccccagtctgtttgttcccctgct
gacagcgaagggaacccaaaagcaggattacgacctagcctcatccttcactccccaaac
ccttacgcttccccccgtgacagcgctcccgacctcctcctggactctcctgactgcaag
aagaagcagaagaagctaactaaagaggagaaggagcagttggataaagctgctatgtac
gatattgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgggtg
aagtccactgagatggacccgtccagagagctcctacctggggcagaggaccaggacact
gacctggcctacaacagcctgcagttctcccggacgcagcaggaccttgcccacaggtta
gccccgggccagggggagcagtcaggctaccagcaggtccctgtgctccagaacactaag
caggctggaggggtgatcagtggagctgtttacgacgatgctgagatggacgcgcttgct
gagatcgagaggatagaacgggagacgctcatagaaagggagcgttgctccaaagaggtt
caggataaagacaagccactgaagaagcggaagcaggactcgtatccccaagagcctgga
gctggtggtacagcgggggcaacccaacctggtgtgggagggggcaatgctggcagcaag
ctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccctaatggtc
agcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggcacc
cacacccctgccctgaggagctggcctgaggaacgcctgtgtcctggggacggccccgac
tccactggagtcctgcggctaaactccaagacagaaggagacacactacagactgcagac
gtccggccagaggtcatcaagcagcgtgccgacacccccaagaagctggggcccgacgtc
cgaccggagacccccaaacacaagcacgaaaacagacgagactcgtccaaacatcgacac
gatggcaaacctgacaatagcaaggtccgccctgacgccaggatgcctgacaagccacga
caacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagtgac
ccatcccgcatccgcaggccagagacccccagcaagtctagcagaggggaacatgactcc
aaacatggacgggacagagacagggagcggggggataaggacagggagaggaaacacagg
acagaggcaggggatccacgggaccgacgatctccagagcagcgctccaggccagagagc
ccgcgggttaagcaggaagggcgagggggggtggaccacagtgggcgccagaggactgac
cggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggagagg
aggagtggggacggcagcaggaaccgacaggactctaagcaacaacctgctgaaaacaag
caggagttccctgcttacctgctggggggcgtaaagtctggaggatttaaaaactttgtg
attcccaaagtgaagcgggataaggatgggcatgtgttggcagctgagatgaggacgcct
ggtctgggttcagtagtggagggctggaaggagccccgggtcaagctggagcgactgggg
ctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagcatc
gacgaggtgcagaaaatcatcagggagaggaaagatagaagcgcacgcagctccaagtcc
tccaagagcagaccctctcattggatctctgagaaagagtccaccatgccactgtgtgag
agggtgaagatgaacaaacgcaagcgcagcaccatcaaggagaagcccaagtacgccgag
gtcaactccgatgatgacgatgacgacgacgactctgtgacggagtctacgcggaagcgt
cacaagaaggagcgggaaaagacatgggagcctgatgagaggagaggctcagggcgcagg
gggtccggcagccgccaccgtgaacgcagcccagaggattcatacgatgagtccccaccg
cccagcatgagtgaccttgccagaaagatgaagaagaaggagaaacagaagaaaagaaag
gcatacgagcccaagctgacagcagaagaactgatggactcctccacgttcaagaggttc
tcagccagtgtggacaacattctggagagcttggaggacattgacttcaatgccatggat
gacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaactggccagt
gaatctgctaagatcaaggccatgggcatcaccttcaggctttcatctggtaagttggtg
aaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctccacactgatg
aaccatgacgcagacgcagaagacgaggagcgactgtggcgtgacctcatcatggagcgc
gtgacaaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcggcccgcatg
cccaaggcggtgtacatcgaggacgtgattgagagggtgctgcagtacaccaagtttcac
ctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccctcacggaggt
ggcttgctgagctccagggctaagagagctaaaagctccacacacaagcagagggtgatc
atcatgctctacaacaaggtctgtgacatcgtcagcaacatctctgagctcctggagata
cagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcactccattcttt
gtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcggtgttctct
cgctatgaaaaacacaggcagctcatcctggaagagatcttcacctctctggccagacta
cccaccagcaaacgcagcctcaggaacttcaggctgaacagcagtgataaggatggggag
cccatgtacatccagatggtcacagctctggtgcttcagcttatccaatgtgtggtgcac
ctcccaaacaacagggacagtcacgacgagtatgataagaaggtggaccaagatgtcctg
atcacgaactcttatgagacggcaatgcgagcagctcagaacttcctgtccgtcttccta
aagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaaaactttgtc
caggacctgctgtctacggtgaacaaaccagagtggccagctgctgagcttctcctcagt
ctgctgggtcgtctactggtgcatcagtttagcaataagcagacagagatggctctgagg
gtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagacggcgtcacc
agcaagacggaccagcgctccatcgaccgcatcctcagagagactcaaggcaatgatgag
acccagcagctgcagaaggccctgttggactacatggatgagaacgcagagacggatcca
tctctagtttttgccaggaagttctacattgcccagtggtttagggacactttgacagag
atggagaaggccatgaagtctcagaaccagcgaggggacgaggactcttctgaaggccag
caccacgccaaggacatcgagaccaccggagagatcatgcagagagccgaggcacgcaag
aagtacctccgcaacattatcaagaccgcgccctcgcagttcagcacactgaggatgaac
tctgacactgtggactatgatgactcttgcctgattgtcagatatttggcctctatgagg
ccattcgctcagagcttcgatatttatttaacacagattctgagagtgctgggggagagt
gccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggctgtagacccc
agtattctggccaggttggacatgcagcgcggggtccatggtcgtctaatggacaactcc
accagtgtacgcgaggctgctgtggagctgctggggcgttttgtgctgagcagaccccag
ctcacagagcagtactacgacatgctgatcgagaggatactggatacgggtatcagtgtg
aggaagagggtgattaagatccttagagacatctgtctggagcaacctaccttcaacaag
atcactgagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggcatcaagaaa
cttgtgaacgagaccttccagaaactctggttcacccctacacccaatcacgataaagac
gccatgacccgcaagatcctcaacatcacagatgtggtgtctgcatgcaaagatacaggc
tatgactggtttgagcagctgctccaaaatctgctgaagacagaggaagatgccgcctat
aagccagccagaaaggcctgcgttcagctggtggacaatctagtggaacacatcctaaaa
tatgaagagtctctcactgacattgagaacaagggggtgaattccaaccgtctggtgtcc
tgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtcaaacatgcc
atgaccatccagccttatctcaccaccaagtgcaacacccagagtgacttcatggtgatc
tgtaatgtggccaagatccttgagctggtgatccctctgatggagcacccctctgagacc
ttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggcatgacggtt
gtacaacactgtgtgagctgtcttggagctgtggtgaacagggtcactcgcaactacaag
tttgtgtgggcttgtttcaaccgttactatggtgccctgaccaagctgaagacccagcac
tctgaggactccaacaaccctgttctggctgctaacaaaccggccttgctgcgctcgctg
ttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattcaagggcccc
acaaaggttgttataaaggaaaaagtgatggagcttttgctgtacttcactaagcatgaa
gatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatccagtaccca
gggctgatgttcatgcaggatgtgatgagtctgtacaatggcatcctgtcggacaggaag
agctctgtcaacctaaagatccaggtgctgaagaacctgcaaacatacctgcaggaggaa
gactcgcgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcaggaggacctg
aaggagatgggtgatatctcgtcaggtatgagcagctccatcatgcagctgtacctgaag
caggtgctggaggccttcttccacacacagtccaccgtacgacattttgccctcaacgtc
attgccctgacactcaaccagggcctcatccatcctgtacagtgtgtgccctacctgatt
gccatgggaacggacccagagcccaccatgaggaataaggcagaccagcagctggtggag
attgataagaaatacagcggcttcatccatatgaaggccgtggcagggatgaagatgtct
taccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggttaccggcag
gacgagaccacctccgccctctgcgcccacctcttctccatggtccgatccaaccggcag
caccgacgagccttcctcatctcactgctcaacttgtttgatgacagctcgaagattgag
gtcaacatgctcctgtacatggcagacaacctagcctgtttcccctaccagatccaggag
gagcctctcttcatcatgcaccacattgacatcaccctgtctgtgtccggcagcaacctg
ctgcagtccttcaaggagtcccttctcaaagagccaaggcagcgggagaagaagtcgaaa
gagaggaagtaccagtcagaggaggagaactcatcatcatcgtcgtcatcagaggaggaa
catcaccgtcacagcatcagctccaacagtagtgacgaggacaacgaggtggtccacagg
cccaagaagcccaaacaccgggcccaggcccctgtggagtcagactctgactctgacctg
gaaatggaggacttggacaaggtgatgcagcgtctgcctgacaacccgatccccttgttg
gactttgccaacgcctcacagggaatactactactattggttctaaagcagcatctcaag
aacctctacggcttctcggacagtaaaatccaaaagtactctccaacggaatcggccaag
gtatacgagaaggcggtgaacaggaagggtcacgtgcacttcagccctcaccagacactg
gacttcctgacctctgacctggccaacgtagaactcacctacgacatcaagaggaggatc
gtcaaacagtacctagatttcaagttactgatggagcatttagaccctgatgaagaggat
gaggaaggtgaggcgtcagccagcgctaacgccagaaacaaagccatcacttcattgctg
ggagggcccagccaccaggaccacaaaaaccaccaccaggaccacaagaaccaccaccag
gctcctatagagacggacgacgacgagagcgacggagatgagaaaaccccagtgtcatca
cggcggtcgaggaagcacggcgactctgcagaggcatcaggtcacatgaatgagacgttg
gccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccgcagatcgcc
cgcatcatccagaagaccaacacgggctacagagtgcaatggatggctggctcctactct
ggagtctggggcgaggctaagaaacgggacggacgcaaaacggtgccttgggtggacact
atcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacacaagctgacg
aacagagtggtgcagactttacggtcactgtactcagcgaaggagggaacttcctaa
DBGET
integrated database retrieval system
