Oncorhynchus keta (chum salmon): 118391522
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Entry
118391522 CDS
T09424
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oke01100
Metabolic pathways
Module
oke_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118391522
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118391522
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
118391522
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118391522
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118391522
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GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
Glyco_transf_7N
Motif
Other DBs
NCBI-GeneID:
118391522
NCBI-ProteinID:
XP_035638902
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Position
12:42633626..42684181
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AA seq
568 aa
AA seq
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MLRRGLLAWVSRVGVLLVLVCCSLSLLYVMTCSPHSEDNLVSHALPRPGMGVGVGGAAGG
TGAAQSGPTGRNGYQAMLAEREEQHKFHITSLKKQITQLKEALQERSEQLKGVQDSMERG
TGGGRGGQSPGGGILGEGGQGPGVDRSHADLQEFLHSQLGRAEVHQGTRLPSEYAMVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSA
SDFIEGITRTEKDKGTVYELTFKGGQSREFRKLVLFRPFGPLMKVKNERVDTADVRINII
VPLSQRADKFRHFMHNFREVCVRQDGRIHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTSDFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDYIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLHKQKPQRLNPAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcctagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccactccgaggacaacctg
gtgagccatgccctgccacgccccgggatgggggttggggtaggaggggcagcagggggc
acgggggcggctcagagcggacccactgggcggaatggatatcaagccatgcttgcagag
cgcgaggagcaacacaagttccacatcactagtttaaagaaacaaatcacccagctgaag
gaggcactacaggagcgcagtgagcagctgaaaggagttcaagactccatggagcggggg
acagggggaggccggggtggccagtccccaggaggaggtatccttggggagggaggacaa
gggccaggggtcgacaggagccacgctgaccttcaggagttcctccacagtcagctgggc
cgggcggaggtccaccaggggactagactacccagtgagtatgccatggtgcccttcgag
agcttcaccctgcagagggtgtaccagctggagatgggtctgacaaggcaccctgaggag
aagcctgtgaggaaggaccggagggatgagctgagtgaagcgctagagacagccctgcag
agtctcaacacgccccgcaacggagcagacaagggccacaccaccaaagtctactcagca
tcagacttcatagaaggtatcactcggacggagaaggacaaaggcactgtgtatgagctc
accttcaaagggggccagagccgtgagttcaggaagttggttctgttccgtccctttggg
ccgctgatgaaggtgaagaacgagagggtggacacagctgacgtccgcatcaatatcata
gtgcccctctcccaacgagccgacaagttcagacactttatgcacaacttcagagaggtg
tgtgttcggcaggatgggcgtatccacctaactgtggtgtactttgggaaggaccaaatg
aatgaagtcaggagcacgctggagaacacatctagggagatcaactttaagaacttcact
ctgctccagctgaatgaggagttctcccgggggcgtggcctggatgtgggtgccagggcg
tggaaaggagggaacgttctccttttcttctgtgatgtcgatatctacttcacctctgac
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcctgttctg
ttcagccagtacaacccaaccctgatttacggtaaccacgactacatccctccagtggag
cagcaactggtcattaaaaaggatacaggattctggagagactttggcttcggaatgaca
tgccaataccgatcagatttcatcaacataggtggtttcgacgtggacatcaaaggctgg
ggcggcgaggacgtgcacctttacaggaaataccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgagaagcgctgcgcggacgagctgccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcacggccag
ctgggcatgctcttcttccgacacgagatcgaggcacacctgcacaagcagaaaccccag
aggctaaaccctgccaagaagacatga
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