Oncorhynchus keta (chum salmon): 118391607
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Entry
118391607 CDS
T09424
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118391607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118391607
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118391607
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118391607
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
118391607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Prefoldin_2
SlyX
Motif
Other DBs
NCBI-GeneID:
118391607
NCBI-ProteinID:
XP_052314193
LinkDB
All DBs
Position
12:complement(39089058..39159147)
Genome browser
AA seq
882 aa
AA seq
DB search
MSTGKPSGIKPPSKISRPIGLPTRTSPSSAASKPVPPEKSPTQDGAVDYRVGEKVWVNGD
KPGYVHFLGNTQFAPGQWVGIVLDEAIGKNDGSVAGVQYFQCEDGRGIFTRPSKLTKTAM
PEREANGGQPNPGETGAKSSSSAAAGAATTTGNSTKTPLSRTVTGNGSMSNLSETDSARK
TRRELRLGDRVLVGGTKAGVVRFMGETEFAKAEWCGVELDEPLGKNDGAVAGTRYFQCLP
RYGLFAPVHKVTRIGFPSTLAKAKASSRRRSTMKRSPSASSMSSLSSVTSSVSGKPSRAG
LLTETSSRYARKISGNTALQEALKEKQQHIEQLLAERDMERGEVAKATSHAGEVQQELSL
LRKVQEQNAMEMEDKLDQLRKLVETADRDKVELLSQLEEEKRKVEDLQFTVEEACITKGD
LETQTKLEHAHIKELEQSLLFEKTKADKLQRDLEDTRVATVSEQSRIMELEREVAALQLR
LRSSQQTGGAVSLSPEALSNLKARAQSQEKKISELNVNLDSRQKQLCSVEEDKSSLEQQL
TSLRQKLDVAEEKNKRTAQTMQELEKRGEQTEKEREAQREENQGKEKELQDRLTQAAESS
ERTAHSQEQLIIEKTALEAQLEALKQQNSKFQEELSLSQVRGSSESQHIGTLCKEIEVLK
LASLTSQNQPDMKDRETLSNQETDEDKELETLRDEIAVLRGENAMAKTLQSAVETLERDK
AQLQERVTSLEQRLLGRQASEGGDSGVPSSGDTALDQLREEKEFAEGQINFLNSVIVDLQ
RKNEELKVKLKKMALAEFNGNDGTDGLEEGGSKDKKAPPRLFCDICDCFDLHDTEDCPTQ
AQSPDSVPHSSFKGKPADQRPYCDICEAFGHSIESCQEDQTF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggcaagcccagcggaatcaagccccccagtaagataagcaggccaattggg
ttaccaacacgcacctccccttcctctgctgcttccaagcctgtaccccctgagaagtct
cccacccaggatggagcagtggactaccgggtgggggagaaggtgtgggtcaacggcgac
aagccaggatatgtccacttcctggggaatacacagtttgccccgggccagtgggtcggc
atcgtcctggatgaggctatcgggaagaacgacgggtcggtggcaggtgtccagtatttc
cagtgtgaggacggcagaggaatattcacacggccctccaagctgaccaagacagctatg
ccggagagggaggccaatggtgggcagcctaaccctggcgagacaggggccaagtcctct
agctctgctgctgctggggctgctactaccactggtaacagcaccaagacaccgctgagt
agaaccgtgaccggcaatgggtcaatgtccaacctctctgagaccgactcagccaggaag
accagaagagaactaagactgggagaccgcgtgctggtggggggtactaaggcaggggtg
gtgaggttcatgggagagacagagtttgccaaggcggagtggtgtggagtggagctggac
gaacctcttgggaagaatgatggagccgtggctggaaccaggtatttccagtgcctgccg
cgatatggtctgtttgctccagtccataaggtgactcgtatcggcttccccagcaccctg
gctaaagccaaggcttcctctcggagacgctccaccatgaagaggagtcccagtgcctcc
tccatgagctccctgagctctgtcacctcctctgttagtgggaaacccagccgggctggc
ctgttgacagagacctcgtcacggtatgctcgtaagatctctggcaacacagcgctacag
gaagcgctgaaggagaagcagcagcacatcgagcagctattggccgagagggacatggaa
cgcggggaggtcgccaaagcaaccagccatgctggagaggtgcagcaggaactgtctctg
ctcaggaaggttcaggagcagaatgctatggagatggaagataagctggaccagctgcgt
aaactggtggagacagcagacagagacaaggtggagctgctcagccaactggaggaggag
aagaggaaagtggaagacctgcagttcactgtggaagaggcttgcatcactaaaggtgac
ctagagacgcagaccaaactggagcatgcccatattaaggagcttgagcagagccttctg
tttgaaaagaccaaagctgacaaactgcagagggatttagaggacactagggtggcaaca
gtgtctgagcagtccaggattatggagctggagagagaagtagcggcgctgcagttgaga
ctacgctcctcccagcagacagggggcgctgtgtcgctgtcaccagaggcgctcagcaac
cttaaggcacgggcccagtcccaggagaagaagatcagtgaactgaatgtgaatctggac
agcaggcagaaacagctatgctctgtagaagaggacaagagctccctggaacagcagcta
accagcctgagacagaaactggacgtagcagaggaaaagaacaagaggacggcacaaacc
atgcaagagctggagaagagaggagagcagacggaaaaagagagggaggcacagagagaa
gagaaccaaggcaaagaaaaagagcttcaggatagactgacgcaggctgctgagtcatca
gagaggaccgcccactcacaggagcagctgatcattgagaagacggcgctagaggctcag
ctcgaggcattgaaacagcagaattccaaattccaggaggaactcagtctctcgcaggtg
cgaggcagctcagaaagtcagcacatcggaactctgtgcaaggaaattgaggtactgaag
ctggccagtctgacgtctcagaaccagccagacatgaaagacagggaaactctgtccaac
caggagacagatgaggacaaggagctggagactctgagggatgagatcgcggtactgcga
ggtgagaacgccatggccaagacgctgcagtctgccgtggagacgctggagagagacaag
gcccagctacaggaacgcgtcaccagcctggagcagaggctattgggacggcaggcctcc
gagggaggggacagtggagtgccttcctcaggtgacacagctctggaccagttgagagaa
gagaaggagtttgcagagggacagattaacttcctgaacagtgtgatcgtggacctacag
aggaagaatgaggagttgaaggtcaagctgaagaagatggctctggcggagttcaatggc
aatgacggcactgatggtttggaggagggtggatctaaggacaagaaggctcctcctcgt
ctgttctgtgatatctgtgactgttttgacctgcatgacactgaggactgtccaacccag
gcccagagccccgactcagtcccccactcttccttcaagggcaagcctgccgaccagcgg
ccgtattgcgacatctgtgaggccttcggtcactccatagagtcctgccaggaagaccag
accttctag
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