Oncorhynchus keta (chum salmon): 118391618
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Entry
118391618 CDS
T09424
Name
(RefSeq) procollagen galactosyltransferase 2-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke00514
Other types of O-glycan biosynthesis
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118391618
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118391618
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118391618
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118391618
Glycosyltransferases [BR:
oke01003
]
O-Glycan biosynthesis
O-linked Gal type
118391618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
118391618
NCBI-ProteinID:
XP_052314397
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All DBs
Position
12:44660054..44683695
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AA seq
590 aa
AA seq
DB search
MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNSR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccgtactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacagcaga
tatgaatacctgatgaagcttaaacaggctgctcttaacttcgccaagacacgctgggct
gactacatactgtacgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcctactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgtcaccggctgggctgctacccggtgcccatggttcactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggctttccaccctcctcacctggactac
tcctggcctttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaggatgacagcatcagctttagtcatctcatcctggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagcctcttccccaaacagagagacctcatgggc
tttgatgaggtttacctgatcaacctgcgtcgtcgccaggaccgtagagacaggatgctg
tattctctcaatgagctagagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgacaaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatcttcgaggatgacgtgcgt
ttccaggccaacttcaagcggcgcgtacttcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggaaaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggtgcccagaaacttctcaacgctgaacccctctccaagatgctgccc
gtcgacgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tacgccggggatcccaagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaagacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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