KEGG   Oncorhynchus keta (chum salmon): 118391643
Entry
118391643         CDS       T09424                                 
Name
(RefSeq) transcription factor SOX-30-like
  KO
K09271  transcription factor SOX15/30
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oke03000]
    118391643
Transcription factors [BR:oke03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    118391643
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 118391643
NCBI-ProteinID: XP_035639053
LinkDB
Position
12:1358242..1366285
AA seq 637 aa
MFATMDRHPKRRAQMTFKKSEPSQNEDDSGPPASKKNASEREEPTSSTERHRGDGEQKRP
VGRPKGSGRSGNSVIGDVQVRPKVIFKADNKWGGDGELMPTSSTHLKGAIQGRTVTFEKE
SASSLASKQSKATFDYPTTSQVLVIKEEVITTAPGQAKVKVDQEPATTHHQGCPPVAPTV
DFSKPIHVVHENGMTFTVLDGKAITLSKVPYPPLVHVNVPPPPVKVKTRGMNLTMPPSEA
ENLEVPQSIDRNGYIKRPMNAFMVWARIHRPALSKVNPTANNADISVQLGIEWSKLTEEE
KRPYYVEARKLKDKHRQEFPGWIYQPRPGKRKCYPSVMSFAPESSCCSAGTSGPAAESYP
MNMMTMANTNTSSCVPYTQATGSNDHGLQVAITAAPNASQTTSPVSIFFQTTACPHPHPT
TSGGKPAERKHEASHSASNPEEAPKPRKISRQQAYYNSANEMPSTSMASSSRGLQMPLPN
MAHPRMYPPSPMPHPVGLFPTPRFPFAPPYFMPGPNFYPPGSYPYLHSPYSYPVLQPQDF
SNPMATPMATPGYPYDDNYDQHESTFSLLNRDYPFRQSGESGQRCQGQAPTASELLGSVP
LLDVRALENVFTNSASVQEVQVPNEEDEEDVRVMRIL
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtttgccacaatggacaggcatcccaagcgaagagcgcaaatgacattcaagaaaagt
gaaccaagtcaaaacgaagatgacagtgggcctccagctagtaagaaaaatgcaagtgaa
cgcgaggaacctacatcttcaacagagaggcatcgaggtgatggagaacaaaaaagacca
gtgggtaggcctaaaggcagtggacgttctggaaatagtgttattggagatgttcaggtt
aggcctaaagttatttttaaagctgataataaatggggtggtgatggagagctaatgccc
acaagttcaacacacctcaagggagccattcaaggtcgaacggttacatttgaaaaggag
agcgcatcatcattagccagtaaacagagtaaagccacatttgattatcccacgacatct
caagtgctggtcatcaaggaggaggtcatcacaactgctccaggtcaggccaaggtcaaa
gttgaccaagaacctgcaacaacgcatcatcaaggatgtccgcctgtggctcccactgta
gacttctccaaaccgatccatgttgtccacgaaaatgggatgaccttcacagtattggat
ggtaaagccataacgctcagcaaagttccatacccaccacttgttcatgtgaatgttccg
ccacccccagtaaaagtgaagactagagggatgaatctcaccatgccaccatcagaagca
gaaaatcttgaagtaccacagagcatagacaggaatggctacatcaagaggcctatgaat
gcgttcatggtctgggcgagaatccacaggcctgccctgtccaaggtcaacccaacagcc
aataatgcagacatcagtgtgcagctaggaatagagtggagcaagcttactgaggaagag
aagaggccctactatgttgaagcacgtaaactcaaagacaagcacagacaggagttccca
ggttggatctatcagcccagacctggaaaaagaaagtgctacccttctgtgatgtccttt
gctcctgaatcatcttgctgctctgcagggacaagtggacctgcggctgagtcttatccc
atgaacatgatgactatggccaatactaacaccagctcctgtgttccatacacacaggcc
acaggctctaatgaccatggtctccaggtggctataacggcagctccaaatgcctctcag
actaccagcccagtctccatattcttccagactactgcctgcccacatccccacccaaca
acctctggtggtaagcctgcagaacgcaagcatgaagccagtcactctgccagcaatcct
gaagaagctcccaaacccagaaaaatcagcaggcaacaggcctactacaattctgccaat
gagatgccctcaacaagcatggcatccagctccagaggtctccaaatgccactccctaac
atggctcaccctcgcatgtatcctccatctcccatgccacatccagtgggcctcttcccc
acccctcgcttcccctttgctccgccctacttcatgcctggacccaatttttatcctcca
ggatcatacccttacctacacagcccatactcctacccagttctccaaccccaggatttc
tcaaaccccatggctactcccatggctactccgggctacccctatgatgacaactacgat
cagcatgagtccacattttcccttctcaacagagactacccgtttcggcagagtggagaa
agcgggcagagatgtcaagggcaggcccccactgcctctgagctcctaggttcggtccca
cttctggacgtacgtgccctggagaacgtcttcaccaactctgccagtgtccaggaggtc
caagtccccaatgaggaagacgaggaagatgtgcgtgtgatgagaattctctag

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