Oncorhynchus keta (chum salmon): 118391647
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Entry
118391647 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118391647
04082 Neuroactive ligand signaling
118391647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118391647
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118391647
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118391647
NCBI-ProteinID:
XP_035639055
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All DBs
Position
12:3696979..3778789
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AA seq
524 aa
AA seq
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MAVLKIRKMSCFGVWTFPVIVAVVCAQSVNDPSNMSIVKETVDRLLKGYDIRLRPDFGGP
PVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYSLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKAAVANNEKMRMDPN
KWLVGNVVQRDDTLYARMKQRDIDAHDSMWEPIFVDDAAMGLGDQKNKMDPHENILLGTI
EIKNEMGASELTLGLSDPRSTMLTYDSSTLQYRKAGLQARHNFGRNTLERHVTQKKSRLR
RRASQLKINIPDLTDVNSIDKWSRMIFPTVFSLFNIIYWLYYVN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttgaaaataagaaaaatgagctgctttggggtttggacctttcctgtaata
gtggcagtggtctgtgcgcaaagtgtcaatgaccctagcaatatgtcaatcgtaaaagaa
actgtggatagactgttgaaaggatatgacattcgcttgaggccggatttcggaggtccc
cctgtgggagtggggatgaatatagacatagccagcatagacatggtatctgaagtcaat
atggactatacattgactatgtatttccagcaagcttggcgagacaagcggttatcctac
tcagagattcccctcaatctcaccctggataaccgggtagcggatcagctgtgggtcccg
gacacctacttcctaaatgacaagaagtcttttgtccatggtgtcactgtgaaaaacaga
atgattcgactgcatccagatggcactgtgctctatagcctgaggatcaccactacagca
gcttgtatgatggacctgagacgatatccactggacgagcaaaactgcacattggagata
gagagctatgggtacaccactgatgacatagagttctactggcgaggaggtgacaacgct
gtgacgggggtggagagaatagaactcccccagttctccattgtggaccacaaactcatc
tccaagaatgttgtcttctctacaggatcctacccccgactctccctcagcttcaagcta
aaaaggaacatcggctatttcatcctgcagacctacatgccctctatcctgatcacaatc
ctctcctgggtctccttctggatcaactatgacgcctctgctgccagagtggctttagga
atcaccactgtgctgaccatgaccaccatcaacactcacctgcgggagacccttcctaaa
atcccttatgtcaaggccattgacatgtacctgatgggctgcttcgtcttcgtttttctc
gccctgctggaatacgccttggtcaactacatcttcttcggcaggggaccccagcgccag
aagagggcggctgagaaagcagctgtcgccaacaacgagaaaatgagaatggatccaaac
aagtggttggtgggaaatgtagttcagagagacgatactctgtatgcgagaatgaaacag
agggatattgacgctcatgactcaatgtgggaaccaatctttgtggatgacgcagcgatg
ggactaggcgatcaaaagaataagatggacccacatgaaaacattctactgggcacaata
gaaattaagaatgagatgggagcgtcggagttgactcttggtctcagtgaccccaggagc
acaatgttaacttatgacagctccaccctgcagtaccgcaaagcagggctgcaggccagg
cacaactttggacgcaacaccctggagcggcatgtgactcagaagaagagccggctacgg
aggcgtgcttcccagctgaagattaacattcctgacttaactgatgtaaactctatcgac
aagtggtcgagaatgatcttccccactgtattttccttgttcaacattatctattggctc
tactacgttaactaa
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