Oncorhynchus keta (chum salmon): 118391782
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Entry
118391782 CDS
T09424
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118391782
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118391782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118391782
NCBI-ProteinID:
XP_052313850
LinkDB
All DBs
Position
12:24534139..24679288
Genome browser
AA seq
2177 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYAWQGPTSAPILFPVTEEDPILCSFSRC
LKADILSVWRRSQRPGRRELWLFWWGDDPNFAELIHHELTAEEDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFPFFLHGESNVCTSVEI
NQHQPVYHLSDEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPSSKDKDKQGSPSEDKMEDMDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPAVA
PQGSSHCTTIYTGGLQVPASQRDPAISSVTLTPPTSPEEAQTVDAQSAQKWVKMSSAVDG
FSVDSTSHHEGKIPRRLASQVVERVWQECNINRAQNKRKFSVTANGTCEEELMEKVGTWD
FVESAQRSHCNCSRHKSLKQRGGSIPGQPQSAGQPTHTQPPTKHKAGGDKPEKGDKQTKR
PQTPFHHRSTACDDVTKETEVAAGQRLAMRSQQAGGGFSGLRPSDSVTKPPQLHGGGVGS
GGSSSEMTGSPQPPPLSPHPCERDRGEETGNGSMKNPSTPHSQHFYQPPTEPCLVGQKGG
EGEPRRLDGLSLHFHHPHTSYPSEPLEPTMYVGSAVNLEEDGSPAPWRFFNLPRRKEAEI
PTPTLPGDKLRDRERDEASGGQEVVSVTELMATSKRPLKVSEERVQMYLQRRNQYLAAAI
TDDNDHEPEVDPYAFEDGDVKFSFSDKKDKMGGERQPGKKHKGEDGAAGLLDDAERAAAH
ARTASTSLIHETDLAVSINDLDNLFNSDEDELTPGSRRAVNGTGDKFGNKEPKPATLDPV
SCISSADLHQMFPTPPSLEQHIMGYSPMNMGSKEYGGLEVGQGMTNLDGTSSLGGHFKIE
VEEGYCSPKPQEIKDFSFVYKPELCQAFVGCSMFAPLKTLPSQCLPPIKIPDECIYRPSW
TTVGKQEMLNHPHVPSMAYLNKDSNIPSVGSAMDQDYSQSYTPQTHTPFMSNSAPPSNSG
TGILPSPATPRFSAPTPRTPRTPRTPRGPASVQGSLKYENSDLYSPASTPSTCRPLNSVE
PATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPTGEA
QYPCTCGFSAVVNRRYGNSSGLFLEDELDIIGRDSDVSREAEKRFEALRQHSLERTGGGG
RGERVPDELILLLQDQCTNPFSPMAGMEPDSRGPGGCPVPACVRVEERDFHSDCYMALEH
GRQFMDNMSGGKVDEALVKSTCLHRWSKQNAVDISALCSQDVLRVLLSLQPVLQDAIQKK
RTVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWE
KLLLDPFGSHRDVGYLVVCPDNEALLQGAKNFFRDLTAVYESCRLGQHRPISKDHPDGIV
RVGGAAAKKLAEQPVSDWFLKAASGNSDAFAKLKLYAQVCRYDLAPYLAAQPLHSSLLAQ
PTPPPASSQSSSMQSSGSSSTTSTGPQNSVTPGGPSLPNSSGSAPSNSTGVANSANSAAS
SGSLPSSGMQSAKPSSFPPFGTMGLQNQGLDGGTQGGQLGQQNTGLPGGDSASQAPTEPL
ESTMEREKVGVPTDGESHAITYPPAIVVYIVDPFTYEEPEAGSSVWTLGLLRCYLEMLQF
LPPHIRNAVSVQIIPCQYLLQPVRSEERHIYAQHLKSLAFSVFSQCRRPLPGSTNVKSLT
GFGPGLAIDTALKSPERPECLRLYTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCL
SHDQRWLLATCTDLYGELLETCIISIDVPNRARRKKGSARRSGLQKLWDWCLGLVQMTSV
PWRVVIGRLGRMGHGELKDWSILLSRRNLQSLSRRLKEVCRMCGISASDTPSILSACLVA
MEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVASSNY
TTDTNIDIAFNPIPDGSDAIGIFDLLDQENDLVDPDIINILPASPTTSPVHSPGGHYHQG
GDGSKGQSTDRMESHDEAPNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLK
ASLHLHVSSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLP
IHFVVLNQMYNFIMNML
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccactccaatctattc
tgtctggctgatttgactgggatcaaatggaagcggtacgcgtggcagggccccacctct
gcgccgatcctcttcccggtgaccgaggaggaccccatcctgtgcagcttcagccgctgc
ctcaaggcggacatactgagcgtgtggcggcggagccagaggcctggacgtagagagctc
tggctgttctggtggggggacgaccctaacttcgcagagctgatccatcatgaacttaca
gctgaggaggacggtgtgtgggagagcggcctgtcctatgagtgcaggacgctcctgttc
aaagccatccacaacctgctggagcgctgtctcatgaaccgcagcttcgtacgcatcggc
aagtggttcgtcaagccctacgagaaggatgagaagcccattaataagagtgaacacctg
tcgtgctcgttccccttcttcctccacggggagagtaacgtgtgcaccagcgtggagatc
aaccagcaccagcctgtctaccacctgagtgacgagcacctcaccctggcccagcaggcc
tccagccccttccaagtcatcctgagtccgtttggtctgaacgggactctgacgggtcag
tcgttcaagctgtcagaccctcccacccagaaactgattgaggagtggaaccagttctat
cccatcagccccagctctaaagacaaggacaagcagggctcgccatcggaggacaagatg
gaggacatggactgggaggacgactccctggccgctgtggaggtccttgtcggtggtgtg
aggatggtgtacccagcctgcttggtgctggtgccccagtctgacatcccagctgtggcc
ccccagggttcctcccactgcaccaccatctacacgggtggactccaagtgcctgcatcc
caacgagaccccgccatctcgtcggtcaccctcacgccccccacatcacccgaggaggcc
cagacagtggacgcccagtcagctcagaagtgggtgaagatgtcgtcggctgtggacggc
ttcagtgtggacagcaccagtcatcacgaggggaagatccctcgcaggctagccagccag
gtggtggagagggtctggcaggagtgcaatatcaacagagctcagaacaagcgtaagttc
tcagtgacagccaatgggacctgtgaggaggagctgatggagaaagtaggaacctgggac
tttgtagagtcagcacagaggtcacactgcaactgctccaggcataagtctctgaagcag
cgaggtggcagcatccccggccagccccagtcagcaggccagcccacccacacccagcca
cccacaaagcacaaggctgggggtgacaagcctgagaagggcgacaagcagaccaagagg
ccgcagacgcccttccaccaccgcagcaccgcctgcgacgatgttaccaaggagacggag
gtggcggcgggccagcggctagccatgaggtcccagcaagctgggggtggtttctccggc
ctccgcccctctgacagtgtcaccaagcccccccagctgcatggcggaggggtgggtagc
ggcggctcttcctcagagatgactggttccccccagccccctcccctcagcccccacccc
tgtgagcgcgaccgaggagaggagacaggaaacggctctatgaagaacccctcaacgccc
cacagtcaacacttctaccagccgcccacagagccctgcctggtggggcagaagggtggc
gagggggaaccccggaggctagatggcctgtccctgcacttccaccacccccacacgtcc
tacccctcagagcccctggagcccaccatgtatgtaggctctgctgtaaacctggaggag
gacggctcccctgcgccatggaggttcttcaacctacccaggaggaaagaggccgagata
cccacgccaacgctgcctggggacaagctgagggacagggagagagacgaggcctcggga
ggacaagaggtggtttctgtcacagaactgatggccacttccaagcggcctctgaaggtg
tccgaggagcgcgtgcagatgtacctccagcggaggaaccagtacctggccgccgccatt
accgacgacaatgaccacgagcctgaagtggatccgtacgccttcgaggacggggacgtc
aagttttccttctctgacaagaaggacaagatgggcggcgagcgccagcccgggaagaaa
cacaagggggaggatggagcagcaggtctgttagatgacgcagagcgggcagccgcacac
gcacgcactgcctccaccagtctgatccatgagacagatttggctgtgtccatcaacgac
ctggacaacctcttcaactcagacgaggacgaactcacgcctggttccagacgagcagtg
aatggaacaggtgataaatttggcaacaaggaaccaaagccagccactctggacccagtc
tcttgcatcagctcagcagatttgcaccagatgttccccactccccccagcctggagcag
cacatcatgggctactctcccatgaacatgggcagtaaggagtatggcggcctggaggtc
ggacagggcatgaccaacctggacggtacctcgtcccttgggggacacttcaagatcgag
gtggaggaaggctactgcagccccaagccgcaggaaatcaaggacttctcgtttgtgtac
aagccggagctgtgccaggcatttgtgggctgctccatgtttgcccccctaaagaccctg
cccagccagtgtctgccccccatcaagataccagacgagtgcatctacaggcccagctgg
accaccgtgggcaaacaagagatgctcaaccacccccatgtgccttccatggcctacctc
aacaaagacagtaacatccccagtgtgggcagtgccatggaccaggactacagccagagt
tacacaccccagacccatactcccttcatgtccaacagtgccccccccagcaacagtggc
acgggcatcctgccctcaccggccaccccgcgcttctccgcccccacaccacgcactccc
cgtaccccacgcacccccagagggcccgccagtgtccagggttcgctcaagtacgagaac
tctgacctctactcgcctgcctccaccccctccacctgtcgacctctcaactcagtggaa
cctgccaccgtgccctctatccccgaggcccacagcctctacgtcaccctcatcctctcg
gagtccgtcatgaacctcttcaaggactgcaacttcgacagctgctgcatctgcgtgtgc
aacatgaacatcaagggggccgacgtgggggtgtacctgagcgaccccacgggagaggcc
cagtacccctgcacctgcggcttcagcgcagtcgtcaaccgccgctatggcaacagctcg
ggcctcttcctggaggacgagctggacatcatcggacgcgactcggacgtcagccgcgag
gcggagaagcgcttcgaggcgctgcggcaacactcgctggagaggacagggggaggaggg
aggggggagagggtaccagacgaactgatcttactgctacaggaccagtgcaccaacccc
ttctctcccatggctgggatggagcctgacagccgggggcccgggggttgtccagtgccg
gcctgtgtgagggtggaggagagggacttccacagtgactgctacatggccctggagcac
ggccgccagttcatggacaacatgtcaggaggcaaggtggacgaggccctggtcaagagc
acctgtctccaccgctggtctaaacaaaatgcagtggacatcagtgctctgtgctctcag
gacgtgttgcgggtgctgctctccctccagcctgtactccaggatgccatccagaagaag
aggacagtgcgctcctggggcgttcagggacccctcacctggcagcagttccacaagatg
gctggacggggctcctacggcacagatgagtctcctgagcccctgcccatccctaccttc
ctggtgggttatgagtatgactttgtggtgctgtcgcccttcggcctgccctactgggag
aagctgctgctggaccccttcggctcccacagggacgtgggctatctggtggtctgtccc
gacaacgaggccctgctccagggggccaagaacttcttcagggacctcaccgccgtctac
gaatcatgtcgtctgggccaacaccgccccatctcaaaagaccacccggacggcatcgtg
agagtgggtggagcggccgccaagaagctggcagagcagcctgtcagcgattggttcctt
aaggctgccagcggtaacagcgacgccttcgccaagctcaagctatacgctcaagtctgc
cgctacgaccttgctccatacctcgctgcacagcctttacacagctccctcctcgcacag
cccacaccccctcctgcctccagccaatcctcatccatgcaatcctccggctcctcctcc
accacctcgaccggcccccaaaactcagtgacccccggaggcccctccctccccaacagc
agcggcagtgcgcctagcaacagcacgggtgtagccaacagtgccaacagcgcggcatca
tcagggagcctgcccagcagcgggatgcagtctgccaagcccagctctttccctcccttt
gggaccatgggcttgcagaaccagggcctggatggtggcacccagggagggcagctgggc
cagcagaacacaggactccccgggggggactcagccagccaggcacccactgaaccccta
gagagcaccatggagcgagagaaggtgggcgtgccgacggacggagagtctcacgccatc
acataccccccggccatcgtggtgtacattgtggaccccttcacctatgaggagcctgag
gcggggtccagtgtgtggaccctgggcctgctgcgctgctacctggagatgctccagttc
ctcccaccacacatccgcaacgctgtctctgtacagatcatcccgtgccagtacctgctc
cagccggtgaggagcgaggagcgtcatatctatgctcaacacctcaagtccctggccttc
tcagtgttctcccagtgcaggcggcccctccccggatccaccaacgtcaagtcactaacc
ggctttggccctggcctggccatcgacactgcactgaagagcccagagagaccagagtgt
ttgcggctatacacgcctccgttcatcctggcgccgaccaaggacaagcagacagagctg
ggggagacgttcggggaggcctctcaaaagtacaacgtgctgtttgtgggctactgcctg
tcccacgaccagcgctggctcctggccacctgcaccgacctgtacggagagctgctggag
acctgcatcatcagcatcgacgtgcccaacagagcgcggaggaaaaaaggctctgcccgg
aggtcgggcctgcagaagctgtgggattggtgcttggggctggtgcagatgacatcagtg
ccatggagggtggtgattggtcgactgggcagaatgggacatggcgagttgaaagactgg
agtattctgttgagcaggaggaacctgcagtctctgagtcgccgtctcaaggaggtgtgt
cgtatgtgtggcatctctgcctccgacactcccagcatccttagcgcttgcctagtcgcc
atggagcctcagggctcctttgtcatcatgccagactctgtgtcgacaggctcagtgttc
ggccgcagcaccactctgaacatgcagacgtcccagctgagtactcctcaggacacgtcc
tgcacccacatcctggtgtttcccacctcagccttcgtccaggtggccagctccaactac
actactgacaccaacatagatatcgccttcaaccccatccccgatgggtcggacgccatt
gggatctttgacctgctggaccaggagaacgacctggtggaccctgacatcatcaatatc
ctgcccgcctcgcccaccacctcgcccgtacactcccccggcggccactaccaccagggg
ggagacggcagcaagggccagagtacagaccggatggagtcccacgatgaagctcctaac
atcctgcagcagcccttggccctgggctactttgtgtccacagccaaagccggcccactg
cctgactggttctggtcagcctgccctcaagctcagaaccagtgtccccttttcctcaag
gcctctctgcatctccacgtgtcttcagtgcaatcagatgaactgctgcacagcaaacac
tcccacccactcgactccaatcagacctcagacgtactcagatttgtgctggagcagtac
aatgccctttcctggttgacatgtgaccccgcgacgcaggaccggcgctcctgtctgccc
atccactttgtggtgctcaaccagatgtacaacttcatcatgaacatgttgtaa
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integrated database retrieval system
