Oncorhynchus keta (chum salmon): 118391796
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Entry
118391796 CDS
T09424
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118391796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118391796
Membrane trafficking [BR:
oke04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118391796
Endosome - Golgi transport
Arf GTPase associated proteins
118391796
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118391796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
PH_6
PH_3
RA
GAP1-M
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
118391796
NCBI-ProteinID:
XP_052313937
LinkDB
All DBs
Position
12:29552710..29570513
Genome browser
AA seq
1141 aa
AA seq
DB search
MNELFVSDVMADQEDSLRAMQNCFRSQFSMEEVECEDIEASRRTSSVDEDSIYLACTLSR
SYDLGDSDLHHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAI
LFVTDVLNVGEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQHRSSMEMSLMNFSF
TSGQRDSGVSLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGT
VKCTDKRAFNLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQR
CADCGAPHPDWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGN
NRVNLFWAANTPPSEALQPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTV
QTDDVLETLSLVFCGADVNCYTGDPELPSPVSVAQHYGQILQVEFLTHNHNTDLPGSRAG
NHTLLEAALPVSHTGYLFKTASSIRPVTECKAKGDFSRRWCSLNQGNFSYYESEKSSSQS
GGMKMSDVLCLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSA
AEDLVCWPFARVGRLSYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELS
MEQEAGAGAVVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDQQQLTDTDVPVI
VDRCMSYITQHGLKSEGIYRRCGVNSKIAALLFFLRHDARQVRLNEGGRQVDDVANVLKR
FLREVGEGVFNGHQASLPWLHTTTVSEMSERVSQYQALLHRLPRVNRATLGAVINHLYCV
QCFADENQMNMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDAEQFQRQLDM
ISHVIKAQKEHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRKIP
PQQGDYWSCFLVDNNQEIERPLHYQEQALTIYFSLGKDCHLVVKKNCYMEAILTYIAGRV
DVSRNGLIKFCEEKGQRGKGTFSRRLCVLSGLSLRLYKDVKSSQPERECQIHALKVYCGI
KRKLQPPSCWGMTVVCEKAVRDIQQWYLCCESKTELIEWLATFMSLQHDGDLWPAASRLD
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttattcgtctcagatgtcatggcagaccaggaggattcattgcgagctatg
cagaactgcttccgcagtcagtttagtatggaggaggttgagtgtgaagacattgaagcg
agcaggagaacatcatcggttgatgaagacagtatctatcttgcctgcacactgtcacga
tcatacgacctcggagactctgatcttcaccatactcctgttatcaagatgggctggctg
gacaagaccccacctcaggggagccttattttccagaagcgttgggtgatgttggatgca
cagtacctgcgatactttcaaaatgagaaggaggtctactcaaagcggatcatagccata
ctgtttgtcactgacgtgcttaacgttggagagcagaagtttgaggtggtgacaaggaac
aggactttcttgttccgtgcagaaaacaacactgtcagggaggaatgggtgtcagtactg
aaagaaactattcagcagcatcgtagcagcatggagatgtcccttatgaacttcagtttt
actagtggacagcgtgatagtggagtctctctcattagtaaacaaggatacctggagatg
aatggactgcgatccaaggtctatgtagtcatctgtgctgacagggtcttcctctacggg
aacgctgaggagcacagccagggtgttggcatcacctacattgagatgaatgtgggtact
gtgaagtgcacagacaaacgggccttcaacctcaccaccttctacagaacattcagtttc
ctggccgagtcggcacagcagagggatcagtgggtggaggccctgcaggactgtgtcagt
cgctctctgtccagcgatgtggtggcccagaagatctgggctgtggaggccaaccagcgc
tgtgcagactgtggcgccccccatccagactgggcctctgtcaacctctgtgtggtcctt
tgcaagtgctgtgcaggcgtgcacaggggtctgggccagagtgtgtccaaagttcgcagt
ctgagaatggatgaaaaggtgtggactgataaccttattcaggtgttcctgttaggtaac
aacagggtaaacctgttctgggcagctaacacaccaccaagcgaggcactccaaccatca
agtgatagtgagaagcgccagcgctttgtctctgctaagtactgtcaggggaaatatcgc
cgctaccatgctctgtttggccaacaggaggccctcaacaaagctctgtgcagtaccgtt
cagacggatgatgtattggagactctgtctctggtgttctgtggagcagatgtgaactgt
tatacaggtgatccagagctgcccagccctgtgtctgtggcccaacactatggacagata
ttacaggtggagttcttaactcacaaccacaacacagatctgccagggtctagggctgga
aatcacacactcctagaggctgctctccctgtctcacacactggttatctcttcaagacc
gcttcttcaatacggccagtaacagagtgcaaagcaaaaggagattttagccgtcgctgg
tgctctctgaaccaaggtaacttcagctactatgagagtgagaagagctccagtcagagc
ggcgggatgaagatgagtgatgtcctgtgtctgttggtcaatcccccagggaaacatggt
tatgcccattcctttgagctgtaccatgactctgggagagtctatctatttggagaagac
tcctctgacaaagtgaaagggtggatcaaggccatcgccaaggcgctggtcccctctgca
gcagaggacctggtgtgctggccctttgcgagggtgggtcggttgagctacactgagggc
cagagccaccatagccccctcctgggctggttctccctggggggctccagactgctccta
ctcctccacggagcagatcgagtggagaacatcgacctgcgcaaaataaaggagctctcc
atggagcaggaggctggtgctggtgctgtggtgctggtggacggaggcaggagcctgcgt
gtggagggggacaggaggcctgacttccagggctggctgagtgggctccaacagggctca
ggcagaggagatggccccctggaccagcagcagctcactgacacagacgtccctgtcatc
gtggaccgctgcatgagctacatcacacagcatggtttgaagtcagagggcatctatcgg
aggtgtggtgtgaactccaagatcgccgccctgctgttctttctccgccatgatgcccgg
caggtccgtctgaatgaaggggggcgccaggtggatgacgtggcaaacgtcctgaagagg
ttcctcagggaagtgggagagggggttttcaatggccatcaggcctctctgccatggctc
cacaccactactgtcagtgagatgagtgagagagtgtcccagtaccaggccctcctccac
agactcccgcgagtcaacagagccactctgggggctgtcatcaaccacctctactgcgtc
cagtgctttgcagatgagaatcagatgaacatgcacaacctggccattgtgtttggtccc
acgctcttccagatggacggcactgataacagcgcaggacaggtggtagaggatctcatc
cagaactaccaggacatcttcaatgtggatgcagagcagtttcagagacagttggacatg
atctcgcatgtcatcaaagcacagaaggaacacacagaggagggaagcccctcacctctc
accatctgcggggtttacctggagaggaaggaggagggctctgagctgctggttcagatc
tcccaggaagtgagtgctgaagagctggtatgtaaggtcctgagacgcaggaaaatccct
ccacagcagggggactactggagctgcttcctggtcgacaacaaccaggagatagagcgt
ccattgcactatcaggagcaagcgctgactatctatttctctctgggtaaagactgtcat
ctggtggtcaagaagaactgctacatggaggccattcttacctacatagcaggcagggta
gatgtctcccgaaacggcctgatcaagttctgtgaagagaaaggtcaaaggggtaaggga
accttcagcagacgcctctgtgtgctcagtggcttgtctctaaggctgtacaaagatgtg
aagagttctcagcctgagagggagtgtcaaatccacgctctgaaggtctactgtggtatc
aagaggaagttacagccaccgtcatgctgggggatgactgtagtgtgtgagaaggcagta
cgagacatacagcaatggtacctgtgctgtgaatcaaagaccgagctgatcgagtggctg
gccacttttatgagcctccagcatgatggcgatctgtggccagcagcttccaggctagat
tcctga
DBGET
integrated database retrieval system
