Oncorhynchus keta (chum salmon): 118391803
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Entry
118391803 CDS
T09424
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118391803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118391803
03036 Chromosome and associated proteins [BR:
oke03036
]
118391803
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118391803
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118391803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_ATRX
SNF2-rel_dom
C5HCH
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
118391803
NCBI-ProteinID:
XP_052314682
LinkDB
All DBs
Position
12:complement(30718328..30741934)
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AA seq
1228 aa
AA seq
DB search
MSSEMLSVPAGTSKLDVLVTKLHEFLAHAPEDDEDRLVTESPVGMTNKDCVEPHSTDRTP
LETSTDTLKQSGFGSRRKPSVVIKHSGLDESGASNESDDDDDGLIINSNGYPDVTRLPKG
TVLVRPEPVENVRDDFRGPEFRCGKSGNLKRAFSRRRGGGEHLEIVSCTACGQQVNHFQR
DSFYQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFCKKC
ILRNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGHLWPDHRKRGRGEGK
SGHYDSHPRHSQNIPVGHWNHSGMDGHVVFNYNTLQIPEEMAKKAKNLVDSTNTVNTTFV
KFIQGGMQQKQTTELKLQYLKTFQSVLKGLKKSQTALEEALLEEFREMGLPNGGENPTFD
DTDVPQQEQEDCVEIDISDKNGLHYLKKIAAEHLEENDSDSNGFMDDGRPSSSIEMKGVL
GTEIIPRRGRGRPRKNSKPGEDACNVTKQLVVQISPAPVEQEPLSGPPELEVEVELEAEE
EEEERKEKVEEREGDCESIELVTEGEYESAEGSESLELEEEPDNRRSPRVKTTPLRRPGE
GKTQPTPSGADSESDSDPDTSPNAEVPQGADEGGLGRGTDDSDSDEVPAVLQRAAMTRSS
DEAESDDGDHRSVTKKCLFGLKKNTPLSPERVVRKRKVPDHSSDSDSSSDDPDLQKEIKT
MTRPRGRPRKVKREDEPTPSKDSPQHRPRGRPRKVKKEDESTSSKEGNTQAAKPQSTPQS
EHRMKQTPSSSSQEEGDLDSESSDISGDQKIKPITEEVALLGAAAFHQSSGDEEQPQSGP
SWAAEDDDDPENRIAKKMLLAQIKANYSSGDDFSSNVESSHDDESDREEKEQEDGKDESP
DENGEKLDSQSSDDDSQSPQEESGMSEELRKSENEGNEQMLKSSTSSTSRVERESVRSYL
QKKQQPSYIVLSDSSVDKSNDEEKDGEEGDNKGTPKGRKKIRRIIVDEHLRSETMRALKE
EEERRRRLAKREQREDFREVIVFEDEASHVACPITTKLVLDQDGGTKEPLIHVHRNLVTR
LKPHQVDGVQFIWDCCCESVKKANSTPGSGCLLAHCMGLGKTLQVEVQSILFQGTMEEKI
YDLQVAKQSLSSRVVDQQQIQRHFTLFELTALYMFEPDLLDDPNSEKKSKRTTPKYLFST
WQDNPSLDEKQVRALAQTWKTSNDKERE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagagatgctcagcgttcctgctggcacgagcaagctcgatgtgttggtgacc
aaactgcatgaattcttggctcatgctccagaggatgatgaggacagactggtgacagaa
agtcctgttggtatgacaaacaaggactgtgtggagccacactcaacagaccgaacccct
cttgagacctcaacagacaccttgaagcagtctggatttggttccaggagaaaaccttca
gttgtgattaaacacagtggactggatgaatctggtgcttcaaatgaaagtgatgatgat
gatgatggcttgatcatcaattcaaacggttatcctgatgtaacaagattacctaaaggc
actgtactggtgaggcctgagccagtggaaaatgtcagagatgacttcagaggtcccgaa
ttccgttgcggaaaatctggcaatctgaagagagctttttctaggagacgtggaggtggt
gaacacttggagattgttagctgtacagcctgtggccagcaagttaaccacttccagagg
gactccttctatcagcatccagtactcaaagtacttatttgcaagtcttgtttcaagtat
tactcaagtgatgatatcagcaaggattgtgatggcatggatgaacagtgcagatggtgt
gcagaggggggaaacctgatctgttgcgacttttgccccaatgccttctgtaagaaatgc
attttgcggaacctggggcgaaaagagttgtctggcatcctggatgaggagagtaagtgg
tactgctacgtatgtagcccagagcctcttctggacctggttgtcgcttgtgacaacgtc
cttgacaacttggggcatttgtggccagaccaccgcaagaggggcaggggcgagggaaaa
tctggacattatgactcccatccaaggcattctcaaaacattcccgtgggtcattggaac
catagtggcatggatggtcacgttgtgttcaactacaacacccttcaaattccagaggag
atggccaaaaaggctaaaaacctggtggactctacaaacactgtaaacacaacttttgtg
aagttcattcaaggtggcatgcagcagaaacagacaaccgagttaaagctacaatacctg
aagactttccagtcagtactgaagggtctgaagaagtctcagacggctctggaggaagcc
cttttggaggagttcagagagatgggtttgccaaatggtggcgaaaaccccacgtttgat
gatactgatgtacctcaacaagaacaagaggattgtgtggaaattgacatttctgataag
aatggccttcattacttaaagaaaattgcagctgaacatttggaagagaatgattcagac
tcaaatggctttatggatgatggaaggccttcgtcctcaattgaaatgaaaggtgtcctt
ggcacagagataattcccagacgaggtagaggcaggccgcggaaaaactcaaagcctgga
gaagatgcttgcaacgtgacaaaacaactggtggtgcaaatttcacctgcccctgttgaa
caagagccactctctggccccccagagttggaggtggaagtggagttggaggcagaggag
gaagaggaagagagaaaagaaaaagtggaggaacgggagggagactgtgaatctattgaa
cttgtaacagagggggagtatgaatctgctgagggaagcgaatctctggaactggaagag
gaaccagacaatagacgctcacctcgggtaaagaccacacccttgcgcaggccaggtgag
ggcaagacccagccgaccccctcgggtgcagacagtgagagtgactcggaccctgacacc
agccccaatgctgaagtgcctcaaggagctgacgagggagggcttgggagaggaactgat
gactctgactccgatgaggtcccagctgtcctccagcgggccgccatgacgcgtagttca
gacgaagccgagagtgacgatggagaccatcggagtgtgaccaagaaatgcctcttcggc
ctgaagaagaacacgcccctctctccagaaagagttgtccgcaaacgcaaggtgccagac
cactcctctgactctgattcctccagtgacgatccagacctgcagaaggagatcaagact
atgaccaggcccagggggaggcctcggaaggttaagagagaggatgaacctacccccagc
aaggatagtcctcaacataggcccaggggcagacctcggaaggtcaagaaagaggatgaa
tctacatccagcaaggagggtaatacccaggcagccaagcctcaaagcacacctcaatcc
gagcatagaatgaagcagacgccatcctcttccagtcaagaagagggggacctggactct
gagtctagcgatatcagtggtgaccagaagatcaagcctatcactgaggaggtggcctta
ctgggggcagcagctttccaccagtcgtccggcgatgaagagcagccccagtctgggcct
tcttgggcagcagaagatgatgacgatccagaaaatagaatcgctaagaaaatgctcttg
gcccaaatcaaagccaactactcatcgggggacgatttctcttcaaacgtggagtcatca
catgatgatgagtctgacagggaagagaaggagcaagaagatgggaaagatgaaagccct
gatgagaatggtgagaaattggatagccagagtagtgatgatgatagccaatcaccgcag
gaagagtctggtatgagtgaagagctgaggaaatcggagaacgagggcaatgaacagatg
ctcaaaagctctacatcatctacctctagagtcgagagggaatcagtccgtagttatcta
cagaagaagcagcaaccctcatatattgtgctgtctgactccagtgtcgataagagtaac
gatgaagagaaggacggcgaggaaggggacaacaaaggtacacctaagggccgcaagaag
atccgcaggatcatcgtagatgagcacctccgctcggagaccatgagagccctgaaagag
gaggaggagagacgcagacgcctggcaaaaagagagcagagggaggacttcagagaggtg
attgtttttgaggatgaggcttctcatgtggcctgtcccatcaccactaagctggtcctg
gatcaggatggggggacaaaggagccactcatccacgtgcacaggaacctggtgaccagg
ctcaagcctcaccaggtggatggtgtgcagtttatctgggactgttgttgtgagtcagtg
aagaaggccaattcaacccctggatcaggctgcttactggcccactgcatgggcctagga
aagacactgcaggttgaggttcagtcaatccttttccagggcactatggaggagaagatc
tatgacctgcaggtggccaagcaatcactgtcgtcccgggtggtggaccagcagcagata
cagagacacttcacactgtttgaactgacggcgctctacatgtttgagccagacctgctg
gatgaccccaactctgagaagaagagcaagaggaccacacccaaatacttattttccacc
tggcaagataacccaagtctagatgagaaacaggtgagagccctggcccagacctggaaa
accagcaatgacaaggagcgggagtga
DBGET
integrated database retrieval system
