Oncorhynchus keta (chum salmon): 118391947
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Entry
118391947 CDS
T09424
Name
(RefSeq) DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118391947
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118391947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
118391947
NCBI-ProteinID:
XP_052315408
EnsemblRapid:
ENSOKEG00005000960
LinkDB
All DBs
Position
13:16119941..16179268
Genome browser
AA seq
1946 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSPEIFLCYKRGHDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSVSNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WTPNTRYPLPVFSTFVLTNSSGDKVYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPMPLSGADYSTLLINLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKNLPKKPCKSLFNSLTNLQHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQRSEHTVFVMPPEPPTTEDESDPPTRYSYKSFPRLRMDLFD
RPKEVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATKGPTIITTVVSVSGDVLSHGSADHSSEVNGEDHTLFARSLIIGDAATDNHCSTGGQ
SDQGYGSKDELHQVQVDLAPSAAPLVDVDHRSKHKAQHNGGDIAGSVDSSVVVAEPTSPV
EAIPHVPSIVKLSTGGSFDTAMKRGETAPGKLFSLRSQSENVSLPEEGESTAPGGSGETG
PAVQGQGQRQKAFSERSCSFSVESRAGMLMEKNGVDHIARRMGADARILADALSGCGTTQ
PPTNPPSKALFKELESEEGRCPMLGKLSEEEGPVMDPTPLEEGLGKEEERMDGEDEMGLK
LEEEGDSGGRGDSSLPTLEMKEVDVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRNL
ADEIEMYMSLRSPLGPKSSSMEFQQGGQGGDSSPDTAPVKQALERRSSLPVPPVKHPGGS
SGDSTPKRSPAAVTRSKTFAVMATRSRGVVASPRSSLTALVRSSQNGSLGSVINSISGMK
MDTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFPAGLDE
SMLSGGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRPGRGPD
SDQGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTTCPFCR
AAFLPLLHVEFHDLRTNTAFYLKPSASGDSIHSTSHQPTTTDSTVLGVGGAADTPRPDLI
SFPESSSEHPGEAPASQTATHKSLVPVPEPAQSDPLGLLEHQAGKRGTSLTRSNSVGGPL
QSLVSYQRQPGHGVSTTSLPCSLTEVDGLGQKRPNPMPVSVPYLSPLVLRKELETLLENE
GDQVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSLSQDSK
QVYVQLLWDNINLHQEPGDPLYQSWRTLLEKKATLAPTDHQETRTFLNSIVRSIQTNDVY
GPINLLLREVKRHPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRQAFDGLSTEQL
KALHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgccactggagcaggacctgtcggagaccaagtccagcgggcccaaggcaccc
atcactgacctagctgtcatcaacaagtcagcgggcgagacagtgccggagggcttcacc
tgcatcgagagcacctacagcgcgcagcaggccaacctcaaccatggcagccttaagagc
cccgagatatttctctgctacaagaggggccacgacaagcccccgctcattgacatcggg
gtgttatatgaaggtaaggagcgtctcatccagggctgtgaggtaatccaggccacgccg
tatggccgctgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttacgccgcgcgccacccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccacacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctctagtgttttcctgtgctacaagaaatccgtgtcggtgtcc
aactccattaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtcggagtctgtgcccctgttctgcctccccatgggggctaagatcgaatgc
tggacccccaacacacgctaccctctccctgtcttctccacctttgtgttaaccaactcc
tctggggacaaggtgtacggtgctgccatccagttctatgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagttgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacagtcaacaccaacaagtgcatctgcctcctttcccgctggcccttcttc
gagtcgttccgcaaattcctcatgttcctctacaagctgtccgtctcgggcccccacccg
ctgcccattgaaaagcacatctcccatttcatgcacaacgtgtccttcccctcacctcag
aggcccagaatcttggtccagctctctgcacacgacaccttgatgctcgcacagcctgtg
tgtactcctatgcctctcagtggtgcagactacagtacactgctgattaacctgggctca
gagaactgtgccacgctgttgcactttgtcctgctggagagtaagatcctgctgcactcc
ttgagacccgctgtactcaccggggtagcagaggctgtggtggcgatgatttttccattc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaacgca
ccttgtcccttcattgtgggcgtggactcccgctattttgacctctatgaccctcctccg
gacgtggtctgtgtggacctggacaccaacacgatctacctgtctgatgagaagaaacac
agcaactggaagaacctcccaaagaagccctgcaagagtctgtttaactccctgaccaac
ctgcaacaccagctgggaattgtgcgtcggacggcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctatctcaaa
cccatcacccaggccccctccgagaaggccacctctgcagactcactatatgacctacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatctttatacgcttcatcgaggagtgcacattcgtcagcgacaaggatacaggcctt
gccttcttcgacgactgcattgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcggaggacactaagctcatggaactagacgaatcacag
aggagtgagcatacagtcttcgtcatgcccccagaacctcccaccaccgaggacgaatct
gatccccctacccgctacagttataagagtttccctcggttgcgtatggacctgtttgac
cgtcccaaagaggtgataccagctctgaggagcagtacaccaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccgctgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgcccgtgggggtgaggctggtccagtcaaagagctgggccatg
cagcaagcctacaacgtcctgctcaagatgaggacgtctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttatacggtcagccggtcatggccgtc
cgtgttctggtggagatgaagaaggcaggggtgcaccctaacgcaatcacctatggctac
tacaacaaggctgttctggaaggcccctggccaagtcggaaccgcagcggtctcttcatg
tgggccaaggttcgcaacgtggtgcgcactgtggcccaatttaaacaggcactccaccgg
atgcccgccacgaaaggacccaccatcatcacgacagtggtgtcggtgagcggcgacgtg
ctgagccacgggagtgcagaccactccagtgaggtgaacggagaggatcacacgctgttc
gcacgcagcctcatcataggagacgccgccacggacaaccactgcagcacaggaggtcag
tctgaccagggctacggctctaaagatgagctgcatcaggtgcaagtggatttggctcca
tcagcagcccctcttgtcgatgtggatcaccgcagcaagcacaaagcacagcacaatggt
ggggacatagctggctcggtggacagttctgtggtcgtagcggagcccaccagccctgtt
gaagccatcccacatgtccccagcatcgtcaagctgtccacaggagggagcttcgatact
gccatgaagagaggagaaactgccccagggaagctgttctctttgcgcagccagagcgag
aatgtctctctgccggaggagggtgagtctacagccccgggtggctctggggagacgggg
cctgcagttcaggggcagggccagcgccagaaggccttctcggagcgcagctgcagcttc
agcgtcgagagtcgtgccggcatgctgatggagaaaaatggtgtggatcatatcgcgaga
cgcatgggtgccgatgcccgaatcctcgccgatgccctttctgggtgtggcaccacccaa
ccacctacaaatccaccatcaaaggccctttttaaggagttggagtcagaggaggggcgt
tgtccgatgctggggaaactgtcagaggaggagggtcctgtaatggacccaaccccattg
gaggaggggctagggaaagaggaggagagaatggacggggaggatgagatgggactgaag
ttggaagaggaaggagattcagggggaaggggtgatagctctctgccaaccctggagatg
aaggaggtggatgtgggggctgatcccctctccctgctggtctcagagcacgaagagttg
gcctccgtaaccagccaggagctgccgcactccctgcctgccgtggtgtcccgaaacctg
gcagacgagattgagatgtacatgagcctgcgaagcccactgggccccaagtcctccagt
atggagttccagcagggggggcagggaggggactcttccccggacactgccccagttaaa
caagctctagaacggaggtccagcctccctgtgccccctgtcaaacacccagggggttca
agcggggactcgacgcccaaacgcagccctgctgctgtcacgcgctccaagaccttcgcc
gttatggccacaaggagccgcggtgttgtggccagcccgaggtcgtcactgactgcgctg
gtgaggtcatcgcaaaatggctcgctgggctcggtcatcaactccatctcaggcatgaag
atggacaccctgctctctggtcccaagatggacgtgttgaagtcaggcatgaagcaggca
gggaacctggccagcaaagtgtggggggctgtggcctccgcctattcctactccgatgac
gaggatgagctggccccgggctacagggatagggatagtttccctgccgggctggatgag
tccatgctgtcagggggtggaggaggggacagtcccacccacagagggccaacccaaggc
ctggtgtccaacggactgacacagagcagcaccagcctggccagcagcagtagcagcagt
gacacagggagaggacctcactccacactgactccaggacggccagggagaggtccagac
tctgatcaaggctcccaccacaccagctcctcaagtatctaccaaaactgtgccctagag
gtactgatgtccagctgctccctgtgtcggtcctgtgagtgtctggtgtacgacgaggag
atcatggcgggctggacggcagacgactccaacctcaacaccacctgtcctttctgccgc
gctgcctttctgcctctgctccacgtcgagttccacgacctgcgcaccaacacagcgttc
tacctgaagcccagtgcatcaggagacagtatccacagcaccagccaccagcccacaact
acagactccaccgtgctcggggttgggggtgcagccgacaccccgcgcccggacctcatc
agcttcccagaatcctcctctgagcacccaggggaggctccagccagccaaaccgccact
cacaagagtttggtaccggtaccggagccggctcagtcggaccctctgggcttgctggaa
caccaggcagggaagcgggggacttctctgacgcgcagtaacagtgtaggcgggccacta
cagagcctggtctcttaccagagacaacccggacacggcgtgtccaccaccagcctgccc
tgcagcctgacagaggtggatggcctgggacaaaagcggcccaaccccatgccagtgtct
gtgccctacctcagccccctggtcctccgcaaagaactggagaccctactagagaacgag
ggggaccaggtgatctacacccataaattcctgagtcaacaccccatcatcttctggaac
ctggtgttttatttctgtcgtctggacctgcccagctacctgcccggcctcatcctcacc
tcagaacactgcaacaatggagtacagctcccccagacctccctgtcccaggacagtaaa
caggtgtatgtgcagctgctgtgggacaacatcaacctgcaccaggagcctggcgatccc
ctctaccagagctggaggaccctgctggagaagaaggccaccctggcccccacggaccat
caggagacacggaccttcctcaacagcatcgtccgcagcatccagacgaacgacgtatac
ggccccatcaatctgctcctccgagaggtcaagcggcacccagaggtcaaacgccaaagg
ggtatctatagggagatcctcttcctggcgcttgtggcattgggacgggagaacattgac
gtcgaggcctttgaccgtgaataccgccaggcctttgatggtctgagcacagagcagctc
aaggctctgcacaagattgaccggccacccaacagcaatgtccagtggtgcctcaagtgc
tttggagctccagtcatctga
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