Oncorhynchus keta (chum salmon): 118391975
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Entry
118391975 CDS
T09424
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04371
Apelin signaling pathway
oke04910
Insulin signaling pathway
oke04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118391975
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118391975
04920 Adipocytokine signaling pathway
118391975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oke03029
]
118391975
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
118391975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
118391975
NCBI-ProteinID:
XP_052315443
LinkDB
All DBs
Position
13:17481763..17559517
Genome browser
AA seq
1288 aa
AA seq
DB search
MLVESFQSRTVFPSALLCDGFALEVRITEMFLNQCAALVGEDQPLCPDLPELDLSELDVS
DLDADSFLGGLKWYSDQSEIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDED
GLPSFEALADGDVTNASDQSCPSTPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYIGD
KAQNHAASNHRIRPPPAVVKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQ
TKASEAKSAWGGGGKDKGGLLGASSSSSSPSSTTSFSSLSSSSSSIASKKKSSSSSVVSQ
QQQQQQPHHQRGESRTAGECSVAGVGAGKWRRCAHGAGGTEGQSEPAAAPAPVPQARRND
SAHACPKLERRPSSEEGRPPGLQPAVDAGRLAAARFIRYMHSYSLPPRETGQTGSCGRCH
KAGAATRAIECWGRHDRGGAAPRHIAVTVKKREEEPGHPLLSQLLTSKQRPARYQAHLLP
PTTTPQPCKSRSSRMSSGVLEREQCPSQAIVVEEKEHRGTVNIDPCRWGLRQAKEPDLDP
LLAESLGLGSWVSQPDQGLDLGLGLGWLEVGLVEQADCFGEDVRDDDAIGSPMALSWGLP
SPFFPDSRNPDPTPSVTQQHLHMQAVCRHPEDQSLPLLAKPTTLPLPLTPESPNDHKGSP
FENKTIERTLSVEISGTPGLTPPTTPPHKVSQENPFKASIKTKLSSCSPSALACKRARMS
EAKPCRPPAPTSAPGRKGPEQTELYAQLSKASTVLPTSVVAATTGGCKEERCCGNNKRSV
QPRCYGDHDYCQSTATSTKQDPAAGADTNAANATVTMTTTTTTPLKPNPGVAEDRHVECK
DSAMPPSSSSSSSTSPPPSSSSLAKQLQQQQSSSPVGKEARGQDRTPITQDKPHPPQSPE
GDQHSASRKQPLRDQDIRAELNKHFGRPQQAIYSQGEKGEEVVVEEGRRGGGEMAGALQT
PKESPAGYENYPKLPSSGSGSTGYLHPGLSPFHEELEGQGVEGHFLYPWEGIPLDLLFES
CSPSCSLSSCSPSRGSVSPPSSLLLSPRHFHWPHSGSPSSRSHSRSRSRSSSSHHRRRSL
SSSPDGRPSSRSRHNMDSSTLRSRTHKSPHSQSRSPLSRRPRYDSYEEYQHECLKREEYR
QDFQKREFERAEQRERQREKAIEERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLR
DDGDNFGFITYRYTCDAVAALENGHTLRRSNEPQFELCFGGQKQFCKSNYTDLDSHSDDF
DPASTKSKYDSMDFDSLLKEAQCSLRSF
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggaatctttccagtcacggactgtattcccttctgcgctgctgtgtgacggg
ttcgctcttgaagttagaattacagaaatgtttctaaatcagtgtgctgctttggttggc
gaagaccaacccctctgcccggacctccccgaacttgacctctcagagcttgatgtcagc
gacctggatgcagatagcttcctgggcgggctcaagtggtacagtgaccaatcagagatc
atttccagtcaatatggcaacgaggcttctaacttgtttgagaagatagatgaggaaaat
gaggccaacttgctggcagtgcttacagaaaccctggacagcatcccagtggacgaggac
ggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagtgaccagagc
tgtccctccacccctgacggctcgccgcgcacccccgaaccagaggaaccctccctgctg
aagaagctccttctggcgcccgcgaactcccagctcagctataatcaatatataggtgac
aaggcacaaaaccatgcagccagcaaccaccggatcagaccaccacctgctgttgtcaag
acggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgtctagtg
aggcgcccgtgcaccgagctgctcaagtacttgaccgccaccgacgacatcctcctccag
accaaagccagcgaagccaagagcgcctgggggggaggcggcaaagacaagggcggcctg
ctgggcgcctcgtcctcctcctcctcaccgtcctccaccacttccttctcctccctctcc
tcctcctcctcctcgatcgcctccaagaagaagtcgtcctcgtcgtctgtcgtgtcacag
cagcaacagcagcagcagccacatcaccagcgaggtgagagccggactgctggcgagtgt
agtgtggctggtgtgggggctgggaagtggcgtcgctgcgctcatggggctggtggcact
gagggacagtccgaacccgcggcggcacccgctcctgtcccccaggcacgtaggaacgac
agcgcccatgcctgccccaaactggagcgcaggccgtccagtgaagaaggaaggccgcca
ggtctgcagcctgcggtggacgcggggcgcctggcagccgctaggttcattaggtacatg
cattcttattctctccctcctagagagacgggtcagacaggcagctgtgggcgttgccat
aaggcgggcgctgccactcgggcaattgagtgctggggcaggcatgaccgcggtggggcg
gcgcctaggcacatcgcagtgaccgttaagaaaagagaggaggagccagggcatccgttg
cttagccagctgctgacctccaagcagaggcccgcccgctatcaggcccacttgctcccg
cccactactacccctcagccttgcaagagccgttcttcaagaatgagctctggagtcctg
gagagggaacagtgtcccagccaggctattgtggtggaggagaaggagcacagagggact
gtcaatatcgatccctgcagatggggtctcagacaggccaaggagcctgatttggacccc
ctgttggccgagagcttaggcctaggcagctgggttagccagccagaccaggggctagat
ttggggctgggactgggctggctagaggttggcctggtggagcaggctgactgtttcggg
gaggatgttcgcgatgatgatgccataggcagccccatggcgctctcatggggcctgcca
agcccattcttcccagattctagaaatccagaccccactccctccgtcacacagcagcac
ctacacatgcaggcagtctgcaggcaccccgaggaccagagcctcccgttgttagccaaa
ccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaagggatccccg
tttgagaacaaaaccattgaacgcacattgagtgtggagatctctggaaccccaggtttg
acaccacctaccacgcccccccacaaagtcagtcaagagaaccctttcaaagcatcgatc
aaaaccaagttgtcttcatgctccccatctgccctggcgtgcaagagggctcggatgagt
gaggcgaaaccctgcaggcccccagccccaacctcggccccaggcaggaagggcccagag
cagactgagctgtacgcccagctaagcaaagcgtccactgtcctccccacctctgtggtt
gctgcgacgacagggggctgcaaggaggagcgctgctgcggcaacaacaagcggagtgtc
cagcctcgctgctacggtgaccacgactattgtcagtccacggcgaccagcacaaaacag
gaccctgccgccggcgctgacactaatgcggctaacgctaccgttaccatgacgactact
acgacaacccctctgaagcccaatccgggtgtggcggaggacaggcatgtggaatgtaag
gactcagccatgccaccctcctcctcctcttcatcctctacatctcctcctccatcttca
tcctctttggccaagcagctgcagcagcagcaaagctcttcccctgtgggtaaggaggct
cgggggcaggaccggacccccatcacccaggacaaaccacacccaccacagtccccagaa
ggggaccagcactctgccagcaggaagcagcccctgcgagaccaggatatccgggcggag
ctcaacaagcactttggccgcccccagcaagccatctatagccagggtgagaagggggag
gaggtggtggtggaggaggggagacggggaggaggggagatggccggagccctgcagacc
cccaaggagagccctgctgggtacgagaactaccccaagctccctagttctgggtctggt
tctactgggtacctgcacccgggcctctctcccttccacgaggagctggagggtcaaggc
gtcgagggccacttcctctacccctgggagggcatccctttggacctgcttttcgagtcc
tgctcgccgtcctgctcgctgtccagctgctccccctcacggggttccgtctcgcccccc
tcctccctcctcctctcccccagacacttccactggccccactcgggctccccctcctcc
cgctctcactcccggtcccggtcccgcagttcctcctcccaccaccggaggcgctccctc
tccagctcgcctgacggacgcccctcctccaggtctcgccacaacatggactccagcact
ttgcggtccaggacccacaaaagccctcactcacagtccagatcccccctcagtcgcagg
ccacggtacgacagctacgaggaataccagcacgagtgtctgaagcgcgaggagtatcgc
caggacttccagaagagggagtttgagagggctgagcagagggagaggcaaagggaaaaa
gcaatagaggagagacgggtggtgtacgtggggagactgaggtccgacagcacgcggacc
gagctgaagcggcgctttgaagtcttcggcgagatcgaagagtgtgccgtgaacctgaga
gatgacggggacaattttggcttcatcacctaccgctacacttgtgacgccgtcgctgcc
cttgaaaacggacacaccttgcgccggtcaaacgagccccagttcgagctgtgcttcggt
ggacaaaagcagttctgcaaatcgaattatacagacttggactcccattctgacgacttt
gatccagcctccactaaaagcaagtacgactccatggatttcgacagcttgctgaaagag
gcccagtgcagcttaagaagcttctga
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