Oncorhynchus keta (chum salmon): 118391979
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Entry
118391979 CDS
T09424
Name
(RefSeq) protein transport protein Sec24D-like
KO
K14007
protein transport protein SEC24
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118391979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118391979
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118391979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
118391979
NCBI-ProteinID:
XP_035639402
LinkDB
All DBs
Position
13:complement(18057126..18085783)
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AA seq
1044 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSSPAQPLYGHYGGQPQSFPAPPTGLMKPVSSPS
GMPPPEVSSQYGSNIQQNGSHPQRYPAPPAAAAASPYGHPPNSPYHTIAPQAPAQQLTNQ
MGSMNLGYGPGPMQNPQAPPTSPPAQQPFQTAPPPTMGQTTLGPPLTGPHSPQMAPPQSP
LAGPSLGGHPSLGGHPSMGGHPPMGGMGRPFPGPPPPGSGGFQQPGPGAAGQPGYPQQPQ
GQFGGQMAGPGMAGPFQGGAAHMSGPPQKKLDPDSIPSTTQVTEDDQAKRGGQVYTTNLR
GQVPPLVTTDFTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLGAIIKPFATLPKNET
PLYVVNHGETGPIRCNRCKAYMCPYMQFIDGGRRYQCGFCNCVNEVPAFYFQHLDHMGRR
VDLYERPELSLGSYEFEATLDYCKNNKPDSPPAYIFMIDVSYANIKSGLVRLVCEELKTL
LDNLPREDGSESSTVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVN
FQESRAVINNLLDQIPDMFADTNESETVFAPVIQAGVEALKTAECSGKLFIFHSSIPTAD
APGKLKNRDDKKLINTEKEKTLFQPQKGVYEQLSKDCVSQGCSVDLFLFPSQYVDLATMG
DVPTHTGGSIFKYSNFQVEMDGEHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATNFFGAI
HMNNTTDVEMAAVDCDKAVTVEFKHDDKLSEETGALMQCALLYTTVSGQRRLRIHNLSLN
CSAQLSELYKSCETDALINFFAKSAYRAMLNQPLKTVREILVNQTAHMLACYRKNCSSPS
TASQLILPDAMKVFPVYLNSLMKTGPLVGSAELSTDDRAHQRLIATAMGVEDTQLLLYPR
LIPLHNMDVASDVVPAPVRCSEERLTDAGMFLLENGRSLFLWLGQACPPELVQRVFNVPS
FAHLPADLSSLPVLDNPQSKKLRSIIDSLLDQRPSAMKLLIVKQKDRSEMLFRQHLVEDK
GPHGGASYMDFLCYVHCEIRQVLT
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacgcctccatactcccaggcccagcctgggatgggg
ggctacccagctgggtttgggagttcgcctgcccagcccctctatggacattatggggga
caacctcagtcattcccagccccaccaacaggtttgatgaagcctgtgtcatccccctct
ggcatgcctccaccagaggtctccagccagtatggctcaaacattcagcagaatggatct
caccctcaaaggtaccctgcccctcctgctgctgctgccgcctctccgtatggacacccc
cctaattccccctaccacaccatagccccccaggccccagcacagcagctcaccaatcag
atgggttccatgaacctcggatatggtccagggcccatgcagaaccctcaggcacccccc
acctctcccccagcccagcagccattccagactgcccctcccccaaccatgggacaaaca
accctgggccccccacttacgggcccccattcaccccagatggctcccccacagtcaccc
ctagctggcccatctttgggagggcacccatctttgggagggcacccatctatgggaggg
cacccacccatgggaggcatgggtaggcccttcccaggcccaccccctccaggctctggg
ggcttccagcagcctgggcctggagcagccggacaaccaggataccctcagcaaccacaa
ggtcagtttggggggcagatggcgggacccgggatggcgggacccttccaaggtggggca
gcccatatgtccgggccacctcagaaaaagctggaccctgactccatccctagcacaaca
caagtcactgaggacgaccaagccaaacgaggaggacaggtgtacaccacaaacctcaga
ggtcaggttcccccgctagtcactactgactttactgtacaggaccaaggaaacgccagt
ccaagattcatgcgttgcaccacctactctttcccctgcacggctgacctggccaagcag
tgccaagttcctttgggtgccatcattaaacctttcgccacgctgccaaagaatgagact
cctctctacgtcgtgaaccatggtgagactggcccgatccgctgtaaccgctgcaaagcc
tacatgtgtccctacatgcagttcatcgatggcggccgccgctaccagtgcggcttctgc
aactgcgtcaacgaagtaccagctttttatttccaacacctggaccacatgggcagaagg
gtggatttatatgagaggccagagctgtcgctggggtcctatgagttcgaagccaccctg
gattactgcaagaacaacaagccagacagtcctccggcatacatcttcatgatagacgtg
tcctatgccaacatcaagagcggactggtcagactggtatgtgaggagctgaagaccctg
ctagacaacctgcccagagaggatggttccgagagctcgacggtgaaggtgggctttgtc
acttacaacaagatcctacacttctacaacgtgaagagtgccctggcccagcctcagatg
atggtggtgtccgacacggccgagatgtttgtcccactgctcgacggcttcctcgtcaac
ttccaggagtctcgcgccgtcatcaacaatctcctggaccagatccctgatatgtttgca
gacaccaacgagagcgagacggtctttgcccccgtcatccaggctggggtagaggcactc
aagacagcagaatgcagtggcaagctgttcatcttccactcatccatccccaccgccgac
gcccctgggaaactgaagaacagggacgacaagaagctgatcaacacagagaaagagaag
actctgttccagccccagaagggtgtgtacgagcagctctccaaggactgtgtgtctcag
ggttgcagcgtggatctcttcctcttccccagccagtatgtggacctcgccaccatggga
gacgtccccacacacacaggaggctccattttcaagtacagcaacttccaggtggaaatg
gatggagagcatttcttgagtgacctgaggaaggatgtggagaaggccatcgggtttgac
gccatcatgagagtccgcaccagcacaggcttcagggctacaaacttcttcggtgctatc
cacatgaacaacaccacagatgtggagatggctgctgtggactgtgacaaggctgtgact
gtggagttcaaacacgatgacaaacttagcgaggagacgggcgcactcatgcagtgtgcc
ttgctgtacacgaccgtcagcggccagcgtcgtttgcggatccacaacctcagtctgaac
tgcagcgcccagctgtctgagctctacaagagctgtgagactgacgccctcatcaacttc
tttgccaagtcagcgtaccgtgccatgctgaaccagcccctgaagacggtgagggagatt
ctggtcaaccagacggcccacatgctagcctgctacaggaaaaactgttccagtccctcc
actgccagccagctgattctgcctgatgccatgaaggtgttcccagtctacttaaacagc
ctgatgaagactggtcccttggtgggcagcgctgagctctctacagacgacagggctcac
cagagactcatcgccacggccatgggggtggaggatacccagctgctgctctacccacgc
cttatcccactgcacaatatggatgttgccagtgatgtggtgccagctccagtgcgctgt
tctgaggagcgcctgacagatgctggcatgttcctgctggagaatgggcgctccctcttc
ctgtggctgggccaggcctgccccccagagctggtccagagagtcttcaatgtgccctcc
ttcgcccacctgcccgctgacctgagctccctgccagttctggataacccacagtctaag
aagctgcgttccatcattgactcattgcttgaccagaggcccagcgccatgaagcttctg
atcgtgaagcagaaagaccggtctgagatgctgttccgccagcacctggtggaggacaag
gggccccatggtggagcctcctacatggacttcctgtgctacgtccactgcgagatcaga
caagtcctcacttaa
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