Oncorhynchus keta (chum salmon): 118391988
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Entry
118391988 CDS
T09424
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118391988
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118391988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118391988
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118391988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
118391988
NCBI-ProteinID:
XP_052315472
LinkDB
All DBs
Position
13:19895397..20186669
Genome browser
AA seq
2507 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFLILVRVRSTNQPIYQGGCHYPNNA
MPSSGLLPWLQGMMCNIGNPCVNHPTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSKFQ
RLSEDVDHWALIIQTSNPANGQPIPLRSILNDNEMFTAYLKKNLSMPLTVVNSLMNSNIH
RNEMMGISRQDDLRTTLCNGTTLDRYVEFTSASDKEAFQNVSCSLPAQQMRRAKEVFLQN
LNTSKMLTNLPLDVNPAETFGLVGRTTEDALHVIDEVNKLQNSMLFKSANTLDFRADALG
SLNMLLCGKAPDSNSRNTTMNFSASGLTRNYTENSELSDSRNRNSSAFCKILIDTIEGTP
GLHVVWSMFRPLIQGKVLYTPDTPATRLMVKEANSTFNALAMIQELANAWEDFGHLVWDY
FQNGRQITTLRALLDNPVFVALLNQRLKGTRWTAELLANFLYNGPPEGRPTGMPPNDWRN
AFNTTSQILDLLKKFIGCLNLDKFEAADSERHLMTRALELLESNRYWAGIVFEDLNPAAS
HPPPYVKYKIRMDIDKGERTNKIKERGWTPGARSNSFNDLRYIWGGFAYLQDMMDHGIIR
AHTNKSQPLGVFAQQMPYPCYVDDVFLRSLARSLPLYMTIAWIYSVAMIVKGIVMEKEAR
LKETVRMMGLRNSTYWLSWAVSSMLPLAVSALLLTLILKYGKVLQYSDPSVIFVFMLVFC
VATIMECFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVLGFQVKIAVSLLSCVA
FGYGCENFAKYEEQGIGIQWSNIAQNPEGDRYSFIVSIIMMLIDALIYWLLTWYIENVFP
GQYGIAKPWSFPFMASYWCGMSAVPNADPSQFKDPMEYNDYLEKPPPNMKAGVSIRNLVK
IYKTGKKLAVDGLSVDFYENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYDIRT
DMDTIRKHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKTEMDQMIKDVGLLHKRK
ELAKNLSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKKGRTIILS
THHMDEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGNEQITNERSGVKQ
GQEKEETDETLRRTSLDEGIASQNWSNSDPTELTAVSKLVRRHVPEAVFLESIGQEITYI
LPYSGAKDGTFALLFKELDLEMADIGFTNYGISDTTLEEIFLKVAEDTGVDVEIPDNKAP
LVRDKTRSSRESKRQRQSLTNVGNTSDKVTGKRAEVKAKFTSRVEDVERVANVNGKGSSV
IMGWKLIRRQFLALFIKRFHHARRSRKGIIAQVILPAVFVCLSLIFSVIIPPFAEYPNLE
LQPWMYGLPQMTFYSNDGPPNNTEVAHVVDSLVNNPGFGTRCMANNPIPNLPCVPIDSKW
TTPSVEPSINNILINGTWSMANPSPNCQCSTPQKTIMLPDCPPGAGGLPPPQRIQNTTDT
LQDLTGRNMSDFLLKTYEKAGKKRYGGISVGGVNSQVRMTEPEIEAVIRDLKSLFNSPQD
NTTEQILLNAETLLKELGTRDNVKVWFYNQAWHGIVSFLNVANNAILRGNLPTGHDPREY
GISSSSHPLNLTKVQLSYQALAATSTDLVVSICVIFAMSFIPASFVLFLIQERVNKAKHL
QFVSGVNPAVYWVANFAWDICNYIVPCLIVIIIFLCFQQKAYVSPPNLPALVWLLVMYGW
SITPMMYPASFIFSVPSTAYVVLTCVNLFIGINGSLATFVMELFDDDKISHINDIVKQVL
LIFPHFCLGRGLIDMGKNQAMATLFESFGEDRFQDPLSWDMVGKNLCAMAIQGAVMFTIT
LLIQYKFCYKPRLISGKSFSKEDEDVDVARERARVHEGGAENDLLRICDLSKVYSGKNIP
AVDRVCLGVPAAECFGLLGINGAGKTTTFKMLTGDIAVSGGEAFLNRYSVRTEMRDVHQN
MGYCPQFDALNDLLTGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSNKAAGTYSG
GNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEERSVILTSHSMEEC
EALCTRMAIMVNGQFKCLGSIQHLKSSSLYLLICLSLSPLISLPHLSLSPHLSFHLSLRL
SPHLFLSPHLSLLFLPISLSHLPFSHLSLSPSLSPHLPLLPLIALSLSLSPSLSLPHLSL
FPSPSLFPSLSLFPSLSLSPSLSLSPSLSLSPHLSPSLPISLPLSPSLSLSPHLSLSPSL
SPHLSPYLSAHLSPLSHLSLPSSLPSPISLSPFLSLPPHLSLSLSLSLSLSPHLSFHLSL
CLSPHLFLSPHLSLLFLPISLSSSLLPSLSLPIYLSSHLSLFPSLSLFHLSLSSHLSLSS
HLSLSSHLSLSPSLSLHLSLLISLSPHLSLPSSLSPSLPLSPSLSPHLSLSPLIFLSPLL
SLPSSLSPLISLPSSLSLSPSLSPSPCSQVVMEPHPTGSSLCLCCPL
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaacttggtctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcgtctggtggtggagttgttgtggcctctcttcctgttcttaatcctcgtc
agggtgagatcaaccaatcaacccatttatcagggcggatgtcattatccaaataacgcc
atgccgtcctccggcttgctgccttggcttcaaggcatgatgtgtaacataggcaacccc
tgtgtaaaccatcccacgccaggagaagcaccaggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagctgcagtcacttctggcaaacagatccaaattccag
aggctttcagaggatgtggaccattgggctttgattatacagacatctaaccctgcaaac
ggtcagcccattcctctgagaagtatcctaaatgacaatgaaatgttcaccgcgtatctg
aagaagaacttgtccatgccattgacagtagtcaacagtctgatgaactcaaatattcac
cggaatgagatgatgggcatttcaaggcaggacgacctgagaaccaccctctgcaatgga
acaacacttgatagatatgtggaattcaccagcgcgtctgacaaggaggcctttcagaac
gtcagctgctccctcccagcacaacagatgagacgagccaaggaagttttcctacaaaac
ctgaatacaagcaagatgctcaccaacttacctttggatgtgaatccggcagagacattt
ggattagtggggagaactacagaagatgcgttacatgtgattgatgaggtgaacaagttg
cagaactcaatgctgttcaagtccgctaacacgctggatttcagagcggatgcgttaggt
agtctgaacatgctactatgtggcaaagctccagactccaactccagaaataccaccatg
aatttctctgcctctggactgacgaggaattacacagaaaacagtgaattatctgattcc
aggaaccgcaattccagtgccttctgcaaaatattgattgatactattgagggaactcct
ggcctacatgttgtctggagtatgtttcggcccctaatccaagggaaggtcctctacacc
cctgacacacctgccactcgactaatggtcaaagaggcaaatagcacattcaatgcattg
gccatgatacaagagctggcaaatgcttgggaggatttcggacatcttgtttgggactac
tttcaaaatggccgccaaatcactacactgcgggccctgctggataaccctgtgtttgta
gccttgctcaaccaacggctcaaaggcacaagatggacggcagaactgctcgccaacttc
ctgtacaatgggccccccgagggtcgccccacgggcatgccgccgaatgactggcgcaac
gcgttcaacaccacaagccaaatcctggatctcctgaagaagttcattgggtgcttgaac
ctggataagtttgaggctgccgacagtgagagacatctcatgactagagccttggagcta
ctagagagcaataggtactgggctggtatcgttttcgaagacctcaaccctgccgccagc
cacccccctccttacgtcaagtacaagatccgcatggacattgataagggggagcgtacg
aataagatcaaagaaaggggatggactcctggggcccgtagcaactcctttaacgacctg
cgctatatatggggaggcttcgcctatctgcaggacatgatggaccatggcataatacgg
gcacacacaaacaaatcccagccgctcggcgtgtttgcccagcaaatgccatatccctgc
tatgtggacgatgtgttcctccgctcgctggcacgctccctgcccctgtacatgaccata
gcctggatctactcggtggcaatgatcgtgaagggcatcgttatggagaaggaggcgcgt
ctgaaggagacagtgaggatgatggggctgaggaactccacctactggctgagctgggcc
gtgtccagcatgctgccgctggctgttagtgctctcctcctcaccctcatcctcaagtat
gggaaggtgctgcagtacagcgacccctctgtgatcttcgttttcatgctggtcttctgc
gtggccaccatcatggagtgtttctttatcagcgtgttcttctccaaggccaacctggcg
gcggcgtgcgggggcctcatctacttcgtcctctaccttccgcacctcctctgctatgcc
tggagggacgtcttggggttccaggtcaaaatcgctgtgagtttgctgtcgtgtgtggcc
ttcgggtatggctgtgagaacttcgccaagtatgaggagcagggcatcggtatccagtgg
agtaacattgcccaaaatcctgagggagatcggtacagtttcatcgtgtccatcatcatg
atgctcatcgacgccctcatctactggctgctcacgtggtacatcgagaacgtcttccca
ggccaatatggaatagccaagccgtggtccttccctttcatggcctcctattggtgcggg
atgtctgcggtgcccaacgctgaccctagtcagttcaaggatcccatggaatacaatgat
tatttggaaaagccaccacccaatatgaaggcaggagtctcaatcaggaaccttgtgaag
atctataaaacgggaaaaaagcttgctgtggatggacttagtgtggacttctacgagaat
cacatcacctctttccttggtcacaatggcgcaggaaaaacaaccactatgtcgatcttg
acgggactgttcgctccaacatcggggaccgctctcataaatggttacgatatccgcacg
gacatggacaccattaggaagcatctgggaatgtgccctcagcacaacgtcttgttcaat
gaccttacagtagaggagcacatctacttctatgccagattaaagggtcgaagccgtgat
gaagtgaaaacggagatggaccaaatgatcaaggatgtagggctgctgcacaaacgcaag
gaacttgccaagaacctgtcagggggaatgcaaaggaaactgtcggtggccatcgcattc
gtgggaggatccaacatcgtcatcctggatgaacccacagcaggggtggacccgtacgcc
cggagagggatatgggaacttctgttgaagtacaaaaaaggtcgcacaatcatcctctcc
actcatcacatggatgaggccgacatcttgggagaccgcattgccattatctctcacggc
aagatgtgttgttacggctcctccctgttcctgaaaaaatactttggcagtggctactac
ctcactctggtcaaggccggaaatgagcaaattaccaacgagcgcagcggagtcaagcag
ggacaggagaaagaggagacggatgagaccttgaggagaaccagtctggatgaagggatt
gcaagccagaactggagcaactctgaccccacagagcttacagctgtcagtaagctggtg
cgtcggcatgttcccgaggcagtgttcctggagagcatcggccaggagatcacctacatc
ctgccttacagcggggccaaggatggcaccttcgccctcctcttcaaagagctggacctg
gagatggctgacattggcttcaccaactacggcatctcggataccacactagaggagatt
ttcctcaaagtggcggaggacacaggtgtggatgtggaaattccagataacaaagcacct
ttggtaagagacaagacaagaagttcaagggaatccaagcggcaacggcaaagcctgacc
aatgtagggaacacttcagacaaagtgactgggaaaagggctgaagtgaaagccaagttc
acaagcagagtggaggatgtggagagagttgccaatgtgaatgggaagggctccagtgtg
ataatgggatggaaactaatccggagacaattcctggccctcttcatcaaacgtttccac
cacgcacgcaggagccgcaaaggcatcattgctcaggtgattctgccagctgtcttcgtc
tgcctgtctctcatcttttccgtcatcattcccccttttgcggagtaccctaatctggag
ctgcagccatggatgtacgggctgccccagatgacattctacagcaatgatggaccacca
aataatacagaggttgctcacgtggtggactctttggtgaacaatcctgggtttgggact
cgctgcatggctaacaaccctataccgaatctcccgtgtgtccccattgattctaaatgg
accactccctcagtggaaccctctatcaacaacatcttaatcaacgggacctggagcatg
gccaacccttcccctaactgccagtgcagcactcctcaaaagactatcatgctgccagat
tgcccacctggagccggggggctgcctccccctcagaggatccagaatactacggacaca
ctacaggacctgacagggaggaacatgtcagacttcctcttgaagacgtatgagaaagca
ggcaaaaaaaggtacggagggatttccgttggaggagttaactcccaagtcaggatgact
gaaccggaaattgaagctgtaatcagggatttgaaaagcctattcaattccccccaggat
aacacgactgagcagatccttctgaacgccgagacgctcctgaaagagctggggaccagg
gataacgtcaaggtgtggttctacaaccaagcgtggcacgggatcgtttcattcctcaac
gtggccaacaacgccatcctgaggggcaacctgcctacgggccatgaccccagggagtac
ggcatctcctcctccagccaccctctcaacctcaccaaggtgcagctctcctaccaggca
cttgctgccacctccaccgatttggtggtgtccatctgtgtcatcttcgccatgtccttt
atcccagcgagcttcgtcctcttcctcatccaggagcgtgtcaacaaagccaagcacttg
cagtttgtcagcggcgtcaacccggccgtctattgggtcgccaacttcgcctgggatata
tgtaactacatagtcccgtgtctaatagtcatcatcatcttcctgtgcttccaacaaaaa
gcctatgtgtcccctcctaacctaccagctttggtttggctacttgtaatgtatgggtgg
tctatcacacccatgatgtacccagcctcgtttatcttcagtgtccccagcacggcctac
gtggtgctgacctgcgtcaacctcttcatcggcatcaatggcagcttggccacctttgtc
atggagctgttcgatgatgataaaatctcgcacatcaatgacattgtgaagcaggtgctg
ctgattttcccgcacttctgtctgggtcgagggctcatcgacatgggcaagaatcaggcc
atggccactttatttgaaagcttcggggaagaccgtttccaggaccccctcagctgggac
atggtggggaagaacctgtgtgccatggccatccaaggggcagtcatgttcaccatcact
ctccttatccagtataaattctgctacaaacccagactgatttctggaaagtcattctcc
aaggaggacgaagatgtggatgtcgctcgggaacgtgcacgcgtccatgaaggcggtgcc
gagaatgacttgttgagaatctgcgatctctctaaggtgtactcagggaagaacattcct
gctgtggacagggtgtgtttgggtgttccagccgctgagtgctttggactgctagggatt
aacggggcaggaaaaacaaccaccttcaagatgctgacgggggacatcgccgtctccgga
ggagaggccttcctaaacagatacagcgtacggacagagatgagggacgttcaccagaac
atgggctactgcccgcagtttgacgccctcaacgaccttctcaccggacgagagcatctg
gagttctacgccagactacgaggcgtaccggagaaggaagtcaccatggtggcagagtgg
ggcatccagaagcttggcctggtcaaatattccaacaaggcagccggtacctacagcgga
gggaacaaacgcaagctctccactgccatggctctgattggttgtcctcctgtggtattc
ctggacgagccaacgacagggatggaccccaaagccagacgcttcctgtgggactgtatc
ctgagtgtcatcaaagaggaacgctcggtcatcctaacatcacacagcatggaggagtgt
gaggccctgtgcacacgcatggccatcatggtgaatggacagttcaagtgtctgggcagc
atccagcatctcaagagcagctctctctacctcctcatctgtctctctctctctcccctc
atctctctcccccatctctctctctcccctcatctctctttccatctctctctccgtctc
tctcctcatctctttctttctccccatctatctctcctctttctccccatctctctctct
catcttcccttctcccatctctctctctccccatctctttctcctcatctccccctgttg
cctctcatcgctctctctctctctctctccccatctctctctctcccccatctctctctc
ttcccatctccctctctcttcccatctctctctctcttcccatctctctctctctcccca
tctctctctctctccccatctctctctctatctccccatctctctccctctctccccatc
tctctccctctctccccatctctctccctctctccccatctctctctctccccatcactc
tctcctcatctctctccatatctctcagcccatctctctcccctctctcatctctctctc
ccctcatctctcccctctcccatctctctctccccttttctctctctacctcctcatctc
tctctctctctctctctctctctctctctctcccctcatctctctttccatctctctctc
tgtctctctcctcatctctttctttctccccatctatctctcctctttctccccatctct
ctctcatcttcccttctcccatctctctctctccccatctatctctcttcccatctctct
ctcttcccatctctctctctcttccatctctctctctcttcccatctctctctctcttcc
catctctctctctcttcccatctctccctctccccatctctctctctccatctctctctc
ctcatctctctctctcctcatctttctctcccctcatctctctctccatctctccctctc
tccccatctctctctcctcatctctctctctcccctctcatctttctctcccctcttctc
tctctcccctcatctctctctcccctcatctctctcccctcatctctctctctctctcca
tctctgtctccctctccgtgctctcaggtggtgatggaacctcatccaaccggctcaagc
ctttgtttgtgctgccctctttag
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integrated database retrieval system
