Oncorhynchus keta (chum salmon): 118392087
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Entry
118392087 CDS
T09424
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
oke03015
mRNA surveillance pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118392087
09122 Translation
03013 Nucleocytoplasmic transport
118392087
03015 mRNA surveillance pathway
118392087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118392087
03041 Spliceosome [BR:
oke03041
]
118392087
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118392087
Spliceosome [BR:
oke03041
]
Complex C
Other components
EJC/TREX
118392087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
118392087
NCBI-ProteinID:
XP_052315756
LinkDB
All DBs
Position
13:complement(23714144..23739571)
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AA seq
1176 aa
AA seq
DB search
MFPGAAITHTGGSSTGHTGFVIVPEVPAPVDMFGSGAQSHPLPLLSVTAVPSITLTTEPQ
GPSGETAQKKTEKDAKQAEEKERKMKQVVKEEESHLPPWQRGRDLTLPSASSQLGSGGSE
EPVMDQGDTLKKSPFGRDKPLSSASGSAMTTTTSPPAIAPKKPRMFSDTSSGSMTSPPKP
VQQGSVVVTTPEELPEPHCISVRPQVVLVSGAQLHTDDTLEVTALNKASVEKPGWKAGGD
DEEKERDSLAQKERDSLAEKERASLAEKERASLAEKERASLAEKERASLAEKERASLAEK
ERASLAEKERACQAEKERACQAEKERACQAEKERACQAEKERACQAEKERACQAEKERAS
QAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEKERASQAEK
ERASQAEKERASLVEKERASLVEKERASLAEKERASQEGTSKPGETRRRGPEETVEVEPM
GPVLPPSYPGKGEDERKGKEDERMRRKEDERKKEAERGRRGERARHRRSSPSSGDDSSSS
DSGSSSSHSSGSTSSQDKKKKTGTGKGRGDEKRRLYKGGEKKQSAREVKQSSLSEPSGPM
EVERPDPGQTQPTPVGDPQNSESCMEESTTPKAFAARKISLTTGSKTSPEGAAAAGGEAE
SGTAAGRKRRWGSSTAVNTKKPSISITTDSLKSLIPDIKPSQDAVVDLHPDDIQLSGDED
TTREDQGLDKGLKIRRTVTQVVPSENQENGQGEQDEEEEEEEEKKPEHDREGTQKEKRKD
SYSEDTMESQSSATHDTDAKKVTPSDTLVRRSISQQKSGVSVTIDDPVRTAKQPSPPRGK
VSNIVHVCNLVRPFTLGQLKELLNRTGSVVEDGFWIDKIKSHCYVTYSSTEEAVATRAAL
HGVKWPQSNPKVLSVDFCEQNELDFHRGLLAVDPREEHRPQPGVGPGGPKVRPGVLPPLM
DGRGDRGVVGGVRDQWAEREREMERRERTRAEREWDRDKVRDFGGKPGEERERGRRSRSL
DRERRRKERDGREKKTDKKDEPPAKLLDDLFNKTKAAPCIYWLPLTEEQANQRGKEREER
QKERERRRKEQQEEEDKKREEERKERIKSREKEGGAAVSTGSVSVRGSEGERERGREREG
EKRRDSGGFRPRGPDTKPSAGFRRSRSRSNPRDKRR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgttccctggggctgctatcacccacacaggaggcagcagcacagggcacacgggattc
gtcattgtacctgaggtccctgcaccagtggatatgtttggatcaggagcccagtcccat
cctctccctctgctgtctgtgacagctgtccccagcataaccctcacaaccgagccccag
ggtccatctggagagacggcacagaagaagacagagaaagatgcaaagcaggcggaggaa
aaggagaggaagatgaagcaggtggtgaaggaggaggagagtcacctgccgccatggcag
cgtggacgtgacttgacgcttccatctgcatcttcacagttggggtctggggggtcagag
gagcctgtgatggaccagggagacaccctgaaaaagtcacccttcggcagggacaaaccc
ctctcctccgcttccggctcagccatgacgaccaccacctccccacctgccatcgccccc
aagaagccccgcatgttctccgacacctcctccggctccatgacctcccctcccaaacct
gtgcagcaggggtcagtggtggtgaccaccccagaggaactccctgaaccccattgcata
tctgtgagaccccaggtagtccttgtctcaggggcacagctgcacacagacgacaccttg
gaggtcaccgcactgaacaaggcgtccgtggagaagcctggatggaaagctggaggagac
gatgaggagaaggagcgtgacagcctggcgcagaaggagcgtgacagcctggcggagaag
gagcgtgccagcctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagc
ctggcggagaaggagcgtgccagcctggcggagaaggagcgtgccagcctggcggagaag
gagcgtgccagcctggcggagaaggagcgtgcctgccaggcggagaaggagcgtgcctgc
caggcggagaaggagcgtgcctgccaggcggagaaggagcgtgcctgccaggcggagaag
gagcgtgcctgccaggcggagaaggagcgtgcctgccaggcggagaaggagcgtgccagc
caggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaag
gagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagc
caggcggagaaggagcgtgccagccaggcggagaaggagcgtgccagccaggcggagaag
gagcgtgccagccaggcggagaaggagcgtgccagcctggtggagaaggagcgtgccagc
ctggtggagaaggagcgtgccagcctggcggagaaggagcgtgccagccaggaggggact
tctaaacccggggagaccaggagaaggggacctgaagagactgttgaggttgagcccatg
ggacctgttctacccccttcttacccaggtaagggagaagatgagaggaaggggaaggaa
gatgagaggatgaggaggaaggaagatgagaggaagaaggaagcagagcgaggcaggcgt
ggggagagggcgaggcacaggaggtcatctccctctagtggtgacgactcttcatcctcg
gactctggatcctcttcgtcacattcctctggctccacctcctcccaggacaaaaaaaag
aagactggcacaggaaaaggaagaggggatgaaaagagaagactgtacaaaggaggagag
aagaaacaatctgccagggaggtaaagcagtcttccctgtcagagccatctggccctatg
gaggtggagaggccagacccaggccagacccagcccacccctgtcggggacccacagaac
agtgagagctgcatggaggagagcaccactcctaaagcgttcgctgcacgcaagatctcc
ttgaccacaggcagtaagacgtctccagagggagcagcagcagcagggggggaggcagag
tccgggaccgctgctgggaggaagaggaggtggggatccagcacggccgtcaacaccaag
aaaccatccatcagcatcaccacagactcactcaagtctctgatcccagacatcaagccc
agtcaggatgctgtggtggatctccaccccgatgacatccagttgtctggggacgaggac
accaccagggaggaccaaggcctggacaagggcctcaagatcagacgcactgtcacacag
gtggtcccaagtgaaaaccaggagaatggccagggagaacaagatgaagaggaggaggag
gaggaggagaagaaaccggagcatgacagagaggggacacagaaagagaagaggaaggac
agctactcagaagacaccatggagtctcagtcctccgctacgcacgacaccgatgctaag
aaagtcactcccagtgatacgctggtgcgtcgctccatcagccagcagaagtcaggtgtg
tctgtcaccatcgacgacccggttcgcaccgccaaacagccctctccgcccagaggcaaa
gtctccaacatcgtccacgtctgtaacctggtgcgacctttcaccctggggcagctgaag
gagctgctgaacaggacaggctcagtggtagaggatggcttctggatcgacaagatcaag
tctcattgctacgtcacttactccagcacagaggaggctgtggccacacgagctgcgctc
cacggggtgaagtggccccaaagcaaccctaaggtcctcagtgtggacttctgtgagcag
aacgagctggactttcacagaggcctactggccgtggatcccagagaggagcaccgcccc
cagcctggtgtgggtcctggaggtcccaaagtcagaccgggcgtgctgccccctctgatg
gacgggcgcggggaccgcggcgtggtcggcggtgtgcgggaccagtgggcggagagagag
agggagatggaacgccgggagaggaccagggcggaacgtgagtgggaccgggacaaggtt
cgagacttcggaggcaaaccaggagaggagagggagagggggaggagatctcgctccctg
gatagagagagaaggcggaaggagagggacggcagggagaaaaagaccgacaaaaaggat
gagcctcctgccaaattactagacgacctcttcaataagaccaaagcagctccctgtata
tactggctccctctcactgaagaacaggcaaaccagaggggaaaagaacgggaagagcga
cagaaagaacgagagaggaggcggaaagaacagcaggaggaggaggacaagaagcgagag
gaggagagaaaggagagaattaaaagcagagagaaggagggaggagctgcggtaagcact
ggaagtgtgagtgtccggggatctgagggagagagggagcgtgggagggagagagagggg
gagaagaggagggacagtggtggattcagacccagaggtcctgatactaaaccctctgct
gggttccgacgctcccgtagccgtagcaacccccgtgacaaacggcgttga
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