Oncorhynchus keta (chum salmon): 118392101
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Entry
118392101 CDS
T09424
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118392101 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118392101 (poln)
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
118392101 (poln)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
118392101 (poln)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
118392101
NCBI-ProteinID:
XP_035639634
LinkDB
All DBs
Position
13:24086623..24170183
Genome browser
AA seq
1592 aa
AA seq
DB search
MERYSSSSNRLYSGPLSASGQKILAALRAQSHNHYSDTARAQSYRRHERYDSRQRGYQSE
ASWSRGTQEERRGREADRPWSRPQSYSQSSSSWDAASQRDYSQTPALSQDSASSSTHRMR
YPLALHTPSNKPHWRDAPEETEPTFSLHFALEDQGPSRPPLPRVEYQREKPTGACGPPFS
RANVSVAPKNHVKSLETQSEGWHLRSGDGEWQCPEQSQEETSIAPEDQRERLAKAKPIEV
ALAGGGDADRRAPVPVTKWQFGSIVLPPPQRAYKAEEKADSDKKRPARGLLLLASESEDF
TMKDMDSGPSFELIMEDDIGESCALEKDSFGASHTVERDGFGASQGLERDGFGASHTVER
DGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGESHTVERDGFGA
SHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVE
RDGFGASHALERDGTEGDVTGGHRDSTESQCVVGLVDQQGALHGDTAQSEEEIVTGGGPR
ENLSERDPFKRKRLFSDMTTDNQRGMEGSVERERKDDINKGGLKKKMERKNSRSSTKPHQ
QRKVSPSLGQMRDGEGQGVTETDSHPEERRNMDGPLVTAAQRNSGGNTEPLAAGHFIPKP
SQEGGRVFRAPTLRGTCLGQTSLATNHHNDTQAGDGGSRERGLTTDPALTNPSLAGHGRA
AGLGSGLTSIRASGVEESSGHHPLLSAQQPPLTPTFSLKSKHGTPLPKIALFRRPVKWEP
PQSCQEKARTLQRGQEWCKTQTPKHPDLTPAFSLDPRAKTKTLHKTEGTKSVALTPNPPH
RPPANPVRPKQGVPMGERGLESTRDHSSSDTPQHRSSKTPKPPKPKRAKPGPNQCQLTPE
TEPEGGSGAGDPRAQSNQSKTCLTTAMISDPRVRDAGKLSPEERGRVLEEAGQASALVLT
MVYQDGTTQMDPEQKLSPSVCGVLVMLKRDLNQTGPEEGVAQRDSLVYLRLEQKPAWAQS
HQDHNLDLFNREMLLQVVSGSQLVVCYKAKDLLRTALQHYRPDLHWKQFSSCRIQDPQVA
AWLLDPADPSSCFTNLLTKHCRTPSRTPTPALGARKVYQVISSLSLLYQLNMELRSKLQS
QGLWELYSNMELTMIPVLAAMESHRIHVDTESLKTTSEMLGTKMKQLEHEAHQAAGQMFL
VTSSTQLRTVLFEKLHLQERCENKKLPKTLNKQQQSTSEAVLLQLQDLHPLPKIILEYRQ
VHKIKSTFVDGVLSCMTSKNFISSTWYQTSAVTGRISAKHPNFQALPRQPVQITKKQYVQ
GKEAEVVTVHPRAMFIPQDGYTFLAADFCQVELRLLAHLSSDPELQRIFNNPQADVFTML
ASQWKGVSEGEVSSEDREHAKRIVYSVVYGAGRERLSGILGVTAEQASHFQDSFLHTYRE
VQTFIHTTIQQCHKQGYVVSIMGRRRTLPHIHSTDWGVRMQAERQAVNFVVQGSAADLCK
MAMIRIFSQVSSSSSLSARLIAQLHDELLYEVEDSQVGEFAVLVKNTMESLQHIDCLGVH
LKVPLKVAVSSGKSWGSMSELHLPQTSLPASS
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtacagtagcagcagtaataggctgtactcagggcctctgtctgcgtctgga
cagaagatcctagcagctctcagagcccagagccacaaccactactctgacacagccagg
gcccaaagctacagacggcatgagcggtatgacagcagacagagagggtaccagtcagag
gccagctggagcagaggaacacaggaggagaggagagggagagaggcagaccggccttgg
tccagaccccagtcctattcccagtcttcctcctcatgggacgctgcatcccagagggac
tactctcagaccccagcactgtcccaggactctgcctcctcttctacccacagaatgagg
taccctctggccctccacacgccctcaaacaagcctcactggagagacgctcctgaagag
acagaacccaccttctcactccacttcgccttggaggaccagggcccttccagaccaccc
ttgcccagagtggagtaccaaagagaaaagccaactggggcctgtggaccaccattctcc
agagctaatgttagcgtagccccaaagaaccacgtaaaaagcctagaaactcaaagtgaa
ggctggcacttacgcagtggagatggggaatggcaatgccctgaacaaagccaagaagaa
acctccatagccccagaggaccaaagagagaggctggctaaagccaagcccattgaagta
gccttagctggtggaggagatgctgaccgtcgggccccagtgcctgttactaaatggcag
tttgggagtatagtactgcctccacctcagagagcttacaaggccgaagagaaggcagac
tctgacaaaaagagaccagcgagagggctgttacttcttgcatcagagagtgaggacttc
acaatgaaggacatggacagtggtccgagctttgaactaataatggaggatgacattgga
gaaagttgtgcattggagaaggatagctttggagcaagtcacacagtagaaagggatggc
tttggagcaagtcaaggtttggagagggatggctttggagcaagtcacacagtagaaagg
gatggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagta
gaaagggatggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcac
acagtagaaagggatggctttggagaaagtcacacagtagaaagggatggctttggagca
agtcacacagtagaaagggatggctttggagcaagtcacacagtagaaagggatggcttt
ggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagtagaaagggat
ggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagtagaa
agggatggctttggagcaagtcatgctttggagagggatggcactgagggtgacgtcact
gggggccacagggacagcacagaaagccaatgtgtagttgggttagttgatcagcagggg
gcgctgcatggagacacagcccagtcagaggaggagatcgtgacaggaggaggaccaagg
gagaacctcagcgagagagacccctttaagaggaaacggctcttcagtgatatgactact
gacaaccagagagggatggagggaagtgtggagagggagagaaaggatgacatcaataaa
ggagggttgaagaaaaagatggagaggaagaatagcaggagtagtaccaaaccccaccag
cagaggaaggtgtcaccctcactggggcagatgagggatggagagggccagggggtgaca
gagacggatagtcacccagaagagagaaggaacatggatgggccattggtgacagctgca
cagaggaacagtggaggaaacacagaacccttagctgctggacatttcattccaaagccg
tctcaggagggtgggagagtattcagagcccccactctgcggggcacctgtctgggacag
acctccctggctactaatcatcacaacgacactcaggctggtgatggaggctccagagag
agggggttgactacagatcctgcactaaccaacccctctcttgctgggcatggaagggcc
gcagggctggggtcgggcctgacctctatacgtgcaagtggtgtggaggagagcagcggc
catcaccctctcctctctgcccaacaaccgcccctgacccctaccttctccctcaaaagt
aaacacggcacccctctgcccaaaatcgcccttttcaggcggccggtgaaatgggaaccc
ccccagtcctgtcaggaaaaagcaaggaccttgcaaaggggccaggagtggtgcaaaacc
caaacccccaaacacccagacctgaccccagcctttagcctagacccccgagccaagacc
aagaccctccacaagactgaggggaccaagagtgttgctctaacccctaaccccccacat
cgacccccagccaacccagttaggccaaaacagggggtcccaatgggggagagggggctt
gaatcaaccagggaccattctagttcagacactcctcagcatagatcctccaaaaccccc
aaaccacccaagccgaagcgggccaaacctgggcctaaccagtgtcaactcaccccagaa
actgaaccagaggggggaagcggtgccggtgacccccgtgcccagtccaaccaatccaaa
acctgtctgactacagccatgatctctgaccccagagtaagggatgctgggaagttgagt
cctgaagagagaggcagggtgctggaggaggcagggcaggccagtgcgctggttctgacc
atggtctaccaggacggaaccactcagatggacccagaacagaagctcagtccgtcagtg
tgtggggtgctggtgatgttgaaaagagatctgaaccagactggaccagaggagggggtg
gcacaacgagacagtctggtctacctcagactggaacagaaacctgcatgggcccagagc
caccaagaccacaacctagacctcttcaatagagagatgctgctgcaggtagtgtcaggg
tctcaactggtggtgtgttacaaggccaaagacctgctccgtacagcactgcagcactac
agaccagacctacactggaaacaattctcatcttgtcgcatccaggacccccaggtagca
gcctggctattggacccagctgacccatcttcctgcttcaccaacctgctcaccaaacac
tgtaggacaccctccagaacccccacacctgccctgggggcaaggaaggtgtaccaggtc
atctccagtctgtctctgctctaccagctgaatatggagctacgctctaaactacagagc
caaggtctgtgggagctgtactctaacatggagctgactatgatccctgtgctggcagcc
atggagagccacaggatccatgtggacacggagtccctaaagacaacatcagagatgctg
gggactaagatgaagcagctagagcacgaggcccaccaggcggcaggccagatgtttcta
gtgaccagcagcacccagctcaggacggttctgtttgaaaagctgcatctgcaggagcgc
tgtgaaaacaagaagctccccaagactctcaacaaacaacagcagtctacatctgaggct
gttttgttgcagctccaggacctgcaccccctgccgaagatcattctcgaatacagacag
gttcataagatcaagtccaccttcgtcgacggggttctgtcttgtatgacgagtaagaac
ttcatctcgtccacatggtaccagaccagtgcagtgactggaagaatctctgccaaacac
ccaaacttccaggccctcccaaggcagccggtgcagatcactaagaagcaatatgttcaa
ggaaaggaagcggaggtggtgacggttcacccacgggccatgttcatcccccaggatggc
tacaccttcctggctgcagatttctgccaggtggaactgcgtctgctggctcacctctcg
tcagatcctgagctgcagaggatcttcaacaacccacaggccgacgtcttcaccatgctg
gcctcacagtggaagggtgtgagtgaaggagaagtgagttcagaggatagagagcatgcc
aagcgtatcgtatactctgtggtgtatggagcaggtagggagcgtctgtcgggcatcctg
ggtgttactgctgaacaggccagccacttccaggacagcttcctccacacctacagagag
gtccagaccttcatacacaccaccatccagcagtgccacaaacaaggttacgtggtgtct
attatgggccggcgaaggacacttcctcacatccactctacagactggggagtccgcatg
caggctgagagacaggccgtcaactttgtggtccaagggtcagctgctgacctgtgtaag
atggccatgatccgtatcttctctcaagtctcctcctccagctctctctctgccaggctg
atagctcagctccatgacgagctgctctacgaggtggaggactctcaggtgggggagttc
gcagtgttggtcaagaacactatggagtccctgcaacacatcgattgtctgggagttcat
ctcaaagtccccctgaaggtggcggtctcaagtggcaagtcctggggctccatgtccgaa
ctacacctcccccaaacatctctccccgcctcttcctga
DBGET
integrated database retrieval system