KEGG   Oncorhynchus keta (chum salmon): 118392101
Entry
118392101         CDS       T09424                                 
Symbol
poln
Name
(RefSeq) DNA polymerase nu
  KO
K16618  DNA polymerase nu [EC:2.7.7.7]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118392101 (poln)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118392101 (poln)
Enzymes [BR:oke01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     118392101 (poln)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   A-family DNA polymerase
    118392101 (poln)
SSDB
Motif
Pfam: DNA_pol_A DNA_pol_P_Exo
Other DBs
NCBI-GeneID: 118392101
NCBI-ProteinID: XP_035639634
LinkDB
Position
13:24086623..24170183
AA seq 1592 aa
MERYSSSSNRLYSGPLSASGQKILAALRAQSHNHYSDTARAQSYRRHERYDSRQRGYQSE
ASWSRGTQEERRGREADRPWSRPQSYSQSSSSWDAASQRDYSQTPALSQDSASSSTHRMR
YPLALHTPSNKPHWRDAPEETEPTFSLHFALEDQGPSRPPLPRVEYQREKPTGACGPPFS
RANVSVAPKNHVKSLETQSEGWHLRSGDGEWQCPEQSQEETSIAPEDQRERLAKAKPIEV
ALAGGGDADRRAPVPVTKWQFGSIVLPPPQRAYKAEEKADSDKKRPARGLLLLASESEDF
TMKDMDSGPSFELIMEDDIGESCALEKDSFGASHTVERDGFGASQGLERDGFGASHTVER
DGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGESHTVERDGFGA
SHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVERDGFGASHTVE
RDGFGASHALERDGTEGDVTGGHRDSTESQCVVGLVDQQGALHGDTAQSEEEIVTGGGPR
ENLSERDPFKRKRLFSDMTTDNQRGMEGSVERERKDDINKGGLKKKMERKNSRSSTKPHQ
QRKVSPSLGQMRDGEGQGVTETDSHPEERRNMDGPLVTAAQRNSGGNTEPLAAGHFIPKP
SQEGGRVFRAPTLRGTCLGQTSLATNHHNDTQAGDGGSRERGLTTDPALTNPSLAGHGRA
AGLGSGLTSIRASGVEESSGHHPLLSAQQPPLTPTFSLKSKHGTPLPKIALFRRPVKWEP
PQSCQEKARTLQRGQEWCKTQTPKHPDLTPAFSLDPRAKTKTLHKTEGTKSVALTPNPPH
RPPANPVRPKQGVPMGERGLESTRDHSSSDTPQHRSSKTPKPPKPKRAKPGPNQCQLTPE
TEPEGGSGAGDPRAQSNQSKTCLTTAMISDPRVRDAGKLSPEERGRVLEEAGQASALVLT
MVYQDGTTQMDPEQKLSPSVCGVLVMLKRDLNQTGPEEGVAQRDSLVYLRLEQKPAWAQS
HQDHNLDLFNREMLLQVVSGSQLVVCYKAKDLLRTALQHYRPDLHWKQFSSCRIQDPQVA
AWLLDPADPSSCFTNLLTKHCRTPSRTPTPALGARKVYQVISSLSLLYQLNMELRSKLQS
QGLWELYSNMELTMIPVLAAMESHRIHVDTESLKTTSEMLGTKMKQLEHEAHQAAGQMFL
VTSSTQLRTVLFEKLHLQERCENKKLPKTLNKQQQSTSEAVLLQLQDLHPLPKIILEYRQ
VHKIKSTFVDGVLSCMTSKNFISSTWYQTSAVTGRISAKHPNFQALPRQPVQITKKQYVQ
GKEAEVVTVHPRAMFIPQDGYTFLAADFCQVELRLLAHLSSDPELQRIFNNPQADVFTML
ASQWKGVSEGEVSSEDREHAKRIVYSVVYGAGRERLSGILGVTAEQASHFQDSFLHTYRE
VQTFIHTTIQQCHKQGYVVSIMGRRRTLPHIHSTDWGVRMQAERQAVNFVVQGSAADLCK
MAMIRIFSQVSSSSSLSARLIAQLHDELLYEVEDSQVGEFAVLVKNTMESLQHIDCLGVH
LKVPLKVAVSSGKSWGSMSELHLPQTSLPASS
NT seq 4779 nt   +upstreamnt  +downstreamnt
atggagaggtacagtagcagcagtaataggctgtactcagggcctctgtctgcgtctgga
cagaagatcctagcagctctcagagcccagagccacaaccactactctgacacagccagg
gcccaaagctacagacggcatgagcggtatgacagcagacagagagggtaccagtcagag
gccagctggagcagaggaacacaggaggagaggagagggagagaggcagaccggccttgg
tccagaccccagtcctattcccagtcttcctcctcatgggacgctgcatcccagagggac
tactctcagaccccagcactgtcccaggactctgcctcctcttctacccacagaatgagg
taccctctggccctccacacgccctcaaacaagcctcactggagagacgctcctgaagag
acagaacccaccttctcactccacttcgccttggaggaccagggcccttccagaccaccc
ttgcccagagtggagtaccaaagagaaaagccaactggggcctgtggaccaccattctcc
agagctaatgttagcgtagccccaaagaaccacgtaaaaagcctagaaactcaaagtgaa
ggctggcacttacgcagtggagatggggaatggcaatgccctgaacaaagccaagaagaa
acctccatagccccagaggaccaaagagagaggctggctaaagccaagcccattgaagta
gccttagctggtggaggagatgctgaccgtcgggccccagtgcctgttactaaatggcag
tttgggagtatagtactgcctccacctcagagagcttacaaggccgaagagaaggcagac
tctgacaaaaagagaccagcgagagggctgttacttcttgcatcagagagtgaggacttc
acaatgaaggacatggacagtggtccgagctttgaactaataatggaggatgacattgga
gaaagttgtgcattggagaaggatagctttggagcaagtcacacagtagaaagggatggc
tttggagcaagtcaaggtttggagagggatggctttggagcaagtcacacagtagaaagg
gatggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagta
gaaagggatggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcac
acagtagaaagggatggctttggagaaagtcacacagtagaaagggatggctttggagca
agtcacacagtagaaagggatggctttggagcaagtcacacagtagaaagggatggcttt
ggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagtagaaagggat
ggctttggagcaagtcacacagtagaaagggatggctttggagcaagtcacacagtagaa
agggatggctttggagcaagtcatgctttggagagggatggcactgagggtgacgtcact
gggggccacagggacagcacagaaagccaatgtgtagttgggttagttgatcagcagggg
gcgctgcatggagacacagcccagtcagaggaggagatcgtgacaggaggaggaccaagg
gagaacctcagcgagagagacccctttaagaggaaacggctcttcagtgatatgactact
gacaaccagagagggatggagggaagtgtggagagggagagaaaggatgacatcaataaa
ggagggttgaagaaaaagatggagaggaagaatagcaggagtagtaccaaaccccaccag
cagaggaaggtgtcaccctcactggggcagatgagggatggagagggccagggggtgaca
gagacggatagtcacccagaagagagaaggaacatggatgggccattggtgacagctgca
cagaggaacagtggaggaaacacagaacccttagctgctggacatttcattccaaagccg
tctcaggagggtgggagagtattcagagcccccactctgcggggcacctgtctgggacag
acctccctggctactaatcatcacaacgacactcaggctggtgatggaggctccagagag
agggggttgactacagatcctgcactaaccaacccctctcttgctgggcatggaagggcc
gcagggctggggtcgggcctgacctctatacgtgcaagtggtgtggaggagagcagcggc
catcaccctctcctctctgcccaacaaccgcccctgacccctaccttctccctcaaaagt
aaacacggcacccctctgcccaaaatcgcccttttcaggcggccggtgaaatgggaaccc
ccccagtcctgtcaggaaaaagcaaggaccttgcaaaggggccaggagtggtgcaaaacc
caaacccccaaacacccagacctgaccccagcctttagcctagacccccgagccaagacc
aagaccctccacaagactgaggggaccaagagtgttgctctaacccctaaccccccacat
cgacccccagccaacccagttaggccaaaacagggggtcccaatgggggagagggggctt
gaatcaaccagggaccattctagttcagacactcctcagcatagatcctccaaaaccccc
aaaccacccaagccgaagcgggccaaacctgggcctaaccagtgtcaactcaccccagaa
actgaaccagaggggggaagcggtgccggtgacccccgtgcccagtccaaccaatccaaa
acctgtctgactacagccatgatctctgaccccagagtaagggatgctgggaagttgagt
cctgaagagagaggcagggtgctggaggaggcagggcaggccagtgcgctggttctgacc
atggtctaccaggacggaaccactcagatggacccagaacagaagctcagtccgtcagtg
tgtggggtgctggtgatgttgaaaagagatctgaaccagactggaccagaggagggggtg
gcacaacgagacagtctggtctacctcagactggaacagaaacctgcatgggcccagagc
caccaagaccacaacctagacctcttcaatagagagatgctgctgcaggtagtgtcaggg
tctcaactggtggtgtgttacaaggccaaagacctgctccgtacagcactgcagcactac
agaccagacctacactggaaacaattctcatcttgtcgcatccaggacccccaggtagca
gcctggctattggacccagctgacccatcttcctgcttcaccaacctgctcaccaaacac
tgtaggacaccctccagaacccccacacctgccctgggggcaaggaaggtgtaccaggtc
atctccagtctgtctctgctctaccagctgaatatggagctacgctctaaactacagagc
caaggtctgtgggagctgtactctaacatggagctgactatgatccctgtgctggcagcc
atggagagccacaggatccatgtggacacggagtccctaaagacaacatcagagatgctg
gggactaagatgaagcagctagagcacgaggcccaccaggcggcaggccagatgtttcta
gtgaccagcagcacccagctcaggacggttctgtttgaaaagctgcatctgcaggagcgc
tgtgaaaacaagaagctccccaagactctcaacaaacaacagcagtctacatctgaggct
gttttgttgcagctccaggacctgcaccccctgccgaagatcattctcgaatacagacag
gttcataagatcaagtccaccttcgtcgacggggttctgtcttgtatgacgagtaagaac
ttcatctcgtccacatggtaccagaccagtgcagtgactggaagaatctctgccaaacac
ccaaacttccaggccctcccaaggcagccggtgcagatcactaagaagcaatatgttcaa
ggaaaggaagcggaggtggtgacggttcacccacgggccatgttcatcccccaggatggc
tacaccttcctggctgcagatttctgccaggtggaactgcgtctgctggctcacctctcg
tcagatcctgagctgcagaggatcttcaacaacccacaggccgacgtcttcaccatgctg
gcctcacagtggaagggtgtgagtgaaggagaagtgagttcagaggatagagagcatgcc
aagcgtatcgtatactctgtggtgtatggagcaggtagggagcgtctgtcgggcatcctg
ggtgttactgctgaacaggccagccacttccaggacagcttcctccacacctacagagag
gtccagaccttcatacacaccaccatccagcagtgccacaaacaaggttacgtggtgtct
attatgggccggcgaaggacacttcctcacatccactctacagactggggagtccgcatg
caggctgagagacaggccgtcaactttgtggtccaagggtcagctgctgacctgtgtaag
atggccatgatccgtatcttctctcaagtctcctcctccagctctctctctgccaggctg
atagctcagctccatgacgagctgctctacgaggtggaggactctcaggtgggggagttc
gcagtgttggtcaagaacactatggagtccctgcaacacatcgattgtctgggagttcat
ctcaaagtccccctgaaggtggcggtctcaagtggcaagtcctggggctccatgtccgaa
ctacacctcccccaaacatctctccccgcctcttcctga

DBGET integrated database retrieval system