Oncorhynchus keta (chum salmon): 118392104
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Entry
118392104 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118392104
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118392104
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118392104
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118392104
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118392104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
118392104
NCBI-ProteinID:
XP_052315348
LinkDB
All DBs
Position
1:69825597..69863093
Genome browser
AA seq
2618 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPCGDGETTGRTGTGGFDPPPAYHDVVESERNNDENGNCSGGSMEFPTTNLYELESRVF
TDHWSIPYKREESLGKCLVAATCLAKHGLADADENCKRFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKQEPIPVGLMGVLAMAFNPDNEYHFKNRMKACQRNWS
EVFGEEAMFAVSPSNNYQKEPHGWLVDLVNLFGEMGGFTAIQAKLNTEEIEIGCVSALVQ
PLAVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TALVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNFEQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QTSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGNNGLTGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATTMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETIGSIRWKIAEHLNCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSVSASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLVVRSRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYNLP
CVSDFIIDILLGSASGEIRHVACDQLYTLSQSDTSAFPEIIKPNVFLLRVVLTSQLPLWS
PTSVMRGVNQRLLSQCTEYFELRCQLLDDLTSSEMEVLSVSAAAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTDKEHLGPSLIQQLLDDFLFRASRIILNTSD
PASSSPPSHDFHPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDSSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIG
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGAEGGDCRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLF
YQRISDQNSPVLPKKSRVSAMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDRLSVLTRL
VRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPAY
QAMARESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVEVLLSKSSEACHWMAQYLVGPEG
REITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVKH
CNQYFSLFSNFAQRGSGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHLH
STLALMTLHSDLNTQHTHDQGVCKLNVSSVPASSTLLQLDADIMASLFTHEGQPYLLEVM
FAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLVV
EDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCVPAKDYFKDLSG
HWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGSS
NGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7857 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggagcaacacatgacgaccctcctctgcatgggtttcccagatcct
gtggccatacgcaaggcgctacgcctggcgaaaaacgacatcaacgaggctgtggcgctc
ctgaccaacgaaagccccgggcttgggtatggatatgagccgatggagagtggccctgcc
ccgggcccatgcggagacggggagaccaccgggcggactgggactggagggttcgaccca
ccccccgcttaccacgatgtggtggagagcgagaggaataatgatgagaatgggaactgt
tctgggggcagtatggagttccccaccactaacctgtatgaactggagagcagagtgttc
actgaccactggtccatcccctacaagagagaggagtcactgggcaaatgtctggtcgca
gccacctgcttagccaaacacggtctggcagatgcagatgagaactgtaagcggtttatg
gaccggtgtatgcacgaggcctttaagaagctcctgaccagtagtgctgtccataagtgg
gggacagagatccatgaggggatctataacatgttgatgttactggtggaactggtggct
gagagggtcaaacaggaacccatacccgttgggctaatgggagtactggctatggccttt
aacccagacaatgagtaccactttaagaaccgtatgaaggcgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgttcgctgtttcgcctagcaacaactaccagaaggag
cctcatggctggctggtagacttggtcaatctgtttggagagatgggagggttcactgct
atccaggctaaactcaatacagaggagatagagattgggtgtgtgtctgctctggtccag
cctctagctgtgtgtgcagaatacctcaactccagccttgtgcagcccatgttggatcct
gttatccataagatgatcacctacgttcagaacctggaggagaaagatctcaaagacaag
aggctggtgagcatcccagagctgctgtcggccatcaagctgctgtgtatgaggttccag
actgccctggtaactgttgtggacgacctacgcctggacactctgctacgcatgttgaag
actcctcacttttccaccaaaatgaactccctcaaagaggtaactaagctgatcgaggag
agtactgtgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtggaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgagttgctgggcagtaaactgtctctggacgagctctcc
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgctgctgccgtcaagtttaacttcgagcagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggccaccacagggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcatctgaggaacac
ctggccatcctcactgacgcgtacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaggacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagacctcatttcttactggctcctggggcaagaagaaagccaaagaaaactcattggcc
aaatcttctcaacagggcagtccccaggcggtctgggtggttccagctctgcggcagctc
catgagatcacacgctccttcatcaaacagacttaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagatcgtcaagctgattacaggatctctggtggtc
tgccatcgactagcggtgtctgcagctgggaacaacggactcaccggacacacactagtg
gacggacgatacacctaccaggagtatctagatggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggactgcctg
gtctctggacccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaa
ctggagccctacgagattactatgaatggctttaatctgtttaagaccttctttgagaat
gtcaacttgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggcta
gacctggctgggatggactttatctggcgtatcgccatggaaacgcctgatgaggagatc
gctaacgaggccatacagctaatcatcacatacagctacaccaacctcaaccccaaaatg
aagaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggagggcccacgttgacacatgctgttaccagggcaaccaag
atgctgaccgccaccaccatgccgactgtagccacgtctgtccaatcaccttccaggtcc
accaagctggtgatcattgagaggctgctgctattggctgagcgttatgtcatcactatt
gaggacctgtactctgtgcctcgtaccattctacctcacggagcgtcgttcaacggccac
cctgtctctctacatgtcacctatgagtccaccaaagacaccttcaccctggaggcccac
agtaacgagactataggcagcatccgctggaagattgctgagcatctcaactgtccagtc
gacaacgttcagatctttgccaacgacagcgtgttgactatgaaccgggaccagaagctg
ctgtcccagctgggtttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acgccctctggtggcagctcagagtcctctgtctccgcttcctcctccagctccgctgtc
ttcaactcagcttatgctatggaacaggagaagtcccttccaggtgttgtcatggcattg
gtgtgtaatgtgtttgagatgctctaccagctggctaacctggacgaaccacggataact
ctgcgtgtacgtaagctgctgctgctgatcccaacagacccagaggttcaagacgctcta
gataactttgttcccaaagagtccagtgtctggagtcaccagaagacattgttcaccttg
ggtcaggggtcaggctctcggtctccgtctctgggttcgaagcaacagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcctgggatgtccaccttcaga
gtcctctacaacctggaggtgttgagttctaagttgatgccgacctcagatgatgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgggactctattccctccgaggtggactatgagaccagacag
ggagtctactccatctgtctacaactggccaggttcttattggttggccaaagtatgccg
tcgttgctggatgatgatgtcatccgagagggtgacactctatctagtcggccattccgt
aacgcagggcgaccagggagacagctatcgctgtgtggaacgcctgagaagagctcctat
agacagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgctgca
cgcgtagctatacagacgatggaggtgggggacttcacctcaacggtggcgtgtttcatg
cgtctaacctgggcggcagccgccggccgattggatctcgtcggcagtcctcagccaatc
agacctgaacacagctcactcctccccctcgtggtccgcagccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggcgaggcgccgcccacagcgttgcatgctgggata
tgtgtgaagcagcagagtgtttctattaaagactgcatcattgctagagaggccctgtct
ctactggtcacctgcctacagctacggacacagcagctagggtcattctacaacctcccc
tgtgtcagcgacttcatcatcgacatcctgctgggatcagccagtggagagatccggcac
gtggcgtgtgaccagctgtacactctgagccaatcagacacgtctgcgttccctgagatc
atcaagcccaacgtgttcctgctgcgagtcgtcctcacctctcagctgcccctctggagc
cccacgtctgtcatgaggggagtcaaccagaggttgctgtctcagtgtactgaatacttt
gaactgcgatgtcaactactggatgacctgaccagttcagagatggaggtgttgtcagtg
agtgcggcagccatgttggaagatgagatcagctggttggataactttgagcccagctgg
agctctgagatggagactagcgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacactactgtcactctgtggcaccgataaggaacacctgggtccttctctgatc
cagcagctgttggatgacttcctgttccgagcgtcccgcatcatcctgaacacatctgac
cccgcctctagctccccccccagccacgacttccaccctaagtgcagcacggccagcagc
agattggcagcctacgaggtgctggtgatgctagcagacagctctgtggccaacctacag
ctcatcaccagagaactgctgtccatgcaccaccagtcagactcctcgctcagtaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactacgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtatgtacgagagcagcaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcacctcaagaaaatcggc
cgtgagcagatcttcaagaatactttccagggaatcttctctgatcagaagatctgcaaa
gactgccctcaccggtatgagcgagaggagacgtttatggcgctgaacctgggtgtgacc
tcctgtcagagtctggagatctcattggaccagtttgtcaggggggaggtgctagaagga
accaacgcctactactgcgaaaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggcttcgactgggag
agcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggagcggaggggggagattgccgg
ggcgaggcagggggctcacccaggaagaaggtgaccatctcagagaactacgaactggtg
ggagttgtagtccacagtggacaggcacatgctggacactactactccttcatcaaggac
agacgcagtgctaggggaaggtggtataagtttaatgacaacgtggtcgaggagtttgat
atgaatgacgagactctggagtacgagtgctttggaggagagtaccggcctaaagtctac
gaccagtctaacccctaccctgacgtgcggcggcggtattggaacgcctacatgttgttc
taccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagtgcc
atgaggcaagaggcagaagacctcacactttcggcaccctctagcccagatgtcagtccc
cagtcgtcccctcggccccccagggccaacaatgaccgtctctctgtcctgacccgcctc
gtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatctaccag
atggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgactac
ttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcctac
caggccatggccagggagagtctccagttggcggtccacttcctgttccacacctacctc
cacaccaagaagaagctgcgggtggacacagaggaatggatggctacggtggaggtgctg
ctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgaggga
cgagagatcaccaaggtgtgtctgttggagtgtggggtgagggaggtgagggtcgtagtg
gcagccatcttagagaaaaccttagagagtgctctccacttcgctgactctggattggac
agcctgaccgatgcgctcctctccctattggacaaagacgttcctgagaacgtcaaacac
tgcaaccaatacttcagcctcttcagcaactttgctcagaggggctctggtccgtgccag
ttgttgttgaaacactcagcgtatcgcaggatgctcatcttcctcctcggacccaacaga
cagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctgcac
tccactctggccctgatgactctccactcagacctcaacacacagcacacacatgatcaa
ggtgtctgtaagctgaatgtgagcagtgtccctgcctcctccaccctcctccagctcgac
gctgacatcatggcctcgctcttcacccacgagggacagccttacctgctggaggtgatg
tttgcggtgcgggagttgtccggccctctgactgtgctgatagagatggtgacatactgc
tccttctgtaatgaacccttctccctgggagtactacagctgctcaagactcagttggag
accgctccgccccatgagctgaagaacgtgttccagctactgcaggagctgctggtggtg
gaggatcctcttcagactcagagactgaagtacgccttcgagtcagagaaaggtctgcta
gcattgatgcaccagagtaacaatgtggacagcagccgctgctatcagtgtgtcaagttc
ctggttaccctggcacagaagtgtgttcctgctaaggactattttaaagatctgtctggt
cactggagctgggcagtgcaatggctgcagaaaaagatgtcggaacactactggactcct
cagagcaacgtgtccaatgagacgtcaacagccaaaacattccagcgcaccatctcagcc
caggacacgctggcctacgccacagcactgctcaacgagaaggagccatctggcagcagc
aacggctctgacggtagtccagccaacgagaacgccgaccgcagcctccgacagggttct
gagtctcccatgatgcttggtgattcaaagagtgatctggaggatgttgacccttag
DBGET
integrated database retrieval system
