Oncorhynchus keta (chum salmon): 118392146
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Entry
118392146 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118392146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118392146
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118392146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
118392146
NCBI-ProteinID:
XP_052315788
LinkDB
All DBs
Position
13:complement(25152009..25179404)
Genome browser
AA seq
1460 aa
AA seq
DB search
MSLRPPTSTLDSGAAIKKHSHLPRLSSLTIGDSERKTSSGQQREPLADFPTESTGQGLVQ
RCVVVQKDQLGFGFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEV
VKLIKSGTYVALTLQGPPPSAAALPLHPLPTDLLPNQRTSLGGEAPPPPPPPLSPGLTSN
PSQRITKPLQNLDVQKHATQILRNMLEQGEAELQDLMEELLLNPSPSLEERIESAKRRAQ
QVRVKIQQDLDGTRLESVTSYVVAGEGRLSGDSSEGDFEACESPHSSPSTSSFRTPLYRR
QGSDTHTFSDSAGKAQIIGPEEEEEEDDSYPLNEMDGPFQDIELLKSRPAHMTVFMRYLF
SQLLDPNPLLFYLSVEVYLGSSPKDARALAPQICSHFLDADAPLKIRVREEYLSDIESRL
HAQEDIRGPLSELQQQVLPDIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPAKERLVVD
RQVTALWEILSKHEEESSSRLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLSFFPKTK
KLSSSKKEKDGEDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHTE
IPGEEGAEGDPPRLSSSSLGEDSMDSPTVSMRLARSESLKAQGEGRRRGGSSGAETVPRS
RSDVDMEDCGEEGEGPGLRPLHHSTSSASSSSARSCENPTPPYTPRSSRRKSVEFPVALL
PDAPALEEDVVDSHNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVF
FQKMRCVLSSDELACIFPNLPQVYELHASLCEAMKKRRESPIVQGIGDIMLARFEGVAGE
EFQEQASHLCSQQSQALELIKNKQRKDPRFAHIIQECESSPHCRRLQLKDLLVSETQRLT
KYPLLLDNILKHTEAGSTDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPT
PQFKSLDLTSKRMIHEGPLTWKVSKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRFL
GGGGGSGGDTKASFSPVVQLDSLLVRSVATDNKALYVISTTEQQIYELVAGTSSEKNIWK
DQLEKTISLAAGSSPLTNNRSTPIFSPSLGNASPVSTGSHVYQSDDSMTEQAVSMGTNSP
NDEDNELTPTTPTAQSGAFLHIEGRDYVKKQIGVAEAALEDVEILKRLIFHNFEEVGWSH
DSDGTPTNETANERSPLNDRQRLASSDTLLSASPSQLEAEHSEAPPSEVGSPSVHVVRKA
VVAGSPSIPDDITDVNLHSDQSPEPRGGARVRGNVFYLVMPTEQGDGLLDESHTDEVIDP
PTLTSTELPDLDQEVMSSNIKHHEEEGQVSSTLSAGKQLEPGNLRREGGLGQSQKVLQSY
VIKHVDEIFHTIEELMSKLHRLRDIETAHHQLLKTLREPPVNQESDDLPRNQVTVVRTPS
LDRNPGDAEPAKPEILSTGF
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcccccccacctcaacactggacagtggggcagccattaagaaacactct
catctgcccaggctcagcagcctgacgataggagactctgagcgcaagacctccagcggc
cagcagagggagcctctggccgacttccccactgagagcacaggtcaaggtctggttcag
agatgtgtggttgtacagaaggaccagctaggtttcggcttcactgtgtgtggcgagagg
atcaagctggtgcagaatgttcgaccaggtggcgcagcggtcaaggcaggggtccacgag
ggagacagaatcataaaggtcaatggctcgctggtgtcgtccatgtctcatcaggaagtg
gtgaagctcatcaagtctgggacatatgttgctctgactcttcaaggaccgcccccttca
gcagctgccctccccctacatcccctccccactgacctcttacctaatcagcggacgtca
ctgggaggagaagccccgcctcctccacctccacccctctcccccggactgaccagcaac
ccctcccaaaggatcaccaaaccactgcagaacctagacgtacagaaacacgccactcag
atcctcaggaacatgctggaacagggagaggccgagcttcaggacttgatggaggaactg
ttactgaacccctccccatccctggaggagcgaatcgaaagtgccaagaggcgggcccaa
caagtcagggttaaaatccagcaagatctggatggaactcgattggaatctgtgaccagc
tatgtagtagcaggagaaggtcggttgtcgggggattcaagtgaaggagactttgaggcc
tgtgagagcccccactcctccccctccacctcctccttcaggacccccctctaccggaga
cagggctctgacacacacaccttctccgactcggctgggaaggctcagatcattggccca
gaggaagaggaggaagaggacgacagctatccgctcaatgagatggacggcccatttcag
gacatagaacttctcaagtcgcgaccggcccacatgaccgtgttcatgagatacctcttc
agccagctactggatcccaacccgctgctgttctacctgtcggtggaggtctacctgggc
tccagccctaaagacgcccgtgccctcgccccacagatctgctcccacttcctggacgct
gatgctccgttgaaaatcagagtacgagaagaatacctgtccgatatagagagtcgactc
catgcccaggaggacatcaggggacctctttctgagctccaacagcaggtgctgcctgac
attcaggaccaaatacaggattacaggagtaagcagatgatgggtctgggttctctgttt
ggagagggagacctgcagcagctggatggagacccagccaaggagaggctagtggtggac
agacaggtcactgctctctgggaaatactctcgaagcacgaagaggagagcagttctcgt
ctagcctctgcggtgctgctgtacctccgtcactcaggcataaagctgagggactccagg
gtgttcccaggcctcagcactgagaaggagaagtggctctccttctttcccaagaccaag
aagctgagcagttcaaagaaagagaaggatggagaggacaggaagagaaaccccatcctg
aagtatatcggcaagcccaggagcacctctcagtccaccttccatgtccccttgtctccc
actgaagtgcgcccgggcagtgtgaggaacatcatccagcagtttgagaaccacacagag
atccccggggaagagggggccgagggagaccctccgaggctgtcctccagcagcctggga
gaggacagcatggacagccccacggtgtcgatgcgtctggctcgtagtgagtctctgaag
gcgcagggggaggggcgtcggcggggcgggtcctcgggggcggagacagtccctcggtcc
cgtagcgacgtggacatggaggactgtggagaggagggtgaagggccgggcctgagaccc
ttacaccacagcacctcctctgcctccagtagctcagcacgatcctgcgagaaccccacc
cctccgtacacccctcggtcttccagaagaaagagtgtggagttcccggtggccttgctc
cctgacgccccagccctagaggaggacgtggtggacagtcacaactggcaggagacggtg
gccccgcaggtcctggctactctctgtccccgagaggtggacagacaggctgtcatctat
gagttgctgacgacggaggcgtctcacctgcgtacactcagggtgttggatcaggtgttc
ttccagaagatgaggtgtgttctgagctctgacgagctggcctgcatcttccccaacctg
cctcaggtctacgagctccacgcgagtctgtgcgaagccatgaagaagagacgagaatct
cccatcgttcagggcatcggcgacatcatgctggccaggtttgagggcgtggcgggggag
gagtttcaggagcaggcgtcccacctgtgcagtcagcagtctcaggccctggagctcatc
aagaacaaacagcgcaaagacccccgtttcgcacacatcatccaggagtgtgagtccagt
cctcactgtaggaggctgcagctgaaggacctgctggtgtctgagacgcagagactcacc
aagtaccctctgctactggacaacatcctcaaacacacagaggccggttccacagacctc
cctcctctccaacaggctcaagcctgttgccgggggatattgcaggccgtcaacgaggtt
gtcagggagacggaacaccggcagcggctcaaccaataccagcgcaggttggaccccacg
ccacagttcaagagtctggacctgaccagtaagagaatgatccatgagggtcctctcacc
tggaaagtcagtaaagacaaaaccttggagatccaggcgctgctgttgtcagaccttctg
gtgttgctccagagaggtccagacgaccggctgctgctgcgctgcccgtcccgctttctg
ggggggggaggtgggagtggcggggataccaaggcctccttcagccccgtggtccagcta
gactcactgctggtgcgctctgtggccacagataacaaggccctgtacgtcattagcaca
acagagcaacagatatacgagctggtagcagggacgtcctcagagaaaaacatctggaag
gaccaacttgaaaagaccatctcattggctgctggctcctcacctttgaccaataacaga
tccacacctattttttccccgagtcttggtaatgcttcccctgtctcaactggcagccat
gtctaccaatcagacgactcgatgacggagcaggcagtttcaatggggacaaactctcct
aacgatgaggacaatgagctcacgcccaccacaccaacggcacaatcaggggctttcctc
cacattgagggacgggactacgtcaagaagcagattggagtggctgaggcagctcttgaa
gacgtggagatactaaagcggctgattttccacaactttgaggaagttgggtggagtcac
gactcggacggaacgcccacaaacgagacagccaatgagaggagcccgctcaatgacaga
cagagactggcgtcctctgatactcttctcagtgccagtcccagccaattggaggctgag
cattccgaagccccgccctcggaggtggggtcccccagtgtacatgttgtgaggaaagct
gtggttgcgggctctccttctatccctgatgacatcactgatgtcaacctccactccgac
caatcacctgagccgagaggcggggccagagtacggggaaacgtgttctacctggtgatg
cctacagagcagggagacggactgctggatgagagtcacacagatgaggtcattgatccc
cccaccctgacctccaccgaacttcctgatctggaccaggaagtgatgtcatcaaacatt
aagcatcatgaggaagaagggcaggtctcttccaccctgtctgctggcaaacaattggag
ccaggaaatctgaggcgggagggagggcttggccaatcgcaaaaggtcctccagagctat
gtgatcaaacacgtggatgagattttccacacaatcgaggagctgatgagcaagctgcac
cggctgagggatatcgagacagctcatcaccagctgctgaaaacactaagagagccgcct
gtcaatcaggagtcagatgatctccctcgcaaccaggtaaccgtcgtcaggacgccgtct
ctggaccggaacccaggggatgcagagccagctaagcctgagatcctctccactggattc
taa
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