Oncorhynchus keta (chum salmon): 118392156
Help
Entry
118392156 CDS
T09424
Symbol
arhgef40
Name
(RefSeq) uncharacterized protein arhgef40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118392156 (arhgef40)
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118392156 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
DHC_N2
CLIP1
IQ_SEC7_PH
WIT1_2_N
Motif
Other DBs
NCBI-GeneID:
118392156
NCBI-ProteinID:
XP_052315929
LinkDB
All DBs
Position
13:30160207..30203330
Genome browser
AA seq
1802 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFIPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKIVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTTEWLHSVNKERGYKREGGGGLDTCLVSTCDGVVR
LPWEEVVYPKFIHNPSDDLTTMADHPTSVSNHTTDLTPVVGLGLGGWGGSSSGEPDSCSW
DEEDDDLPPDSVDAEAVLPRRRCSEDGLGRTTRHHQMAGDGDYVELLEPRGGPDGGADPR
QRYLEMHGICKTKTLPLCRRSKAIKLRRGKAWGYGRLDAAGGSRGVLGGKRDSVTHRGDW
LPPRPLPRVIDVGRARRSESYPSSLQNSDEGEKQALGKDPEGLGSQGLYFDGPSKERRPG
VGREREGSGCNVTQPCRDSHGSNSLVASETTNPKAAHVVEGQSDQRSRSESVFEDADKSL
SGDSDTMPTTDTRGSGENAARPLIDIPGNGENVDSPLADGSETQKGRHSTGDSCVPDKTA
DSTEHRGTERSLSRPGTDADPKGATTPEERAEGKTEEIGVCPRGKEVKTGGFRAPRRKRK
GRGGKGKAKSGCRGNQKTRDQAGSKPPSKTPQRGPAISSTTNLPITTTSLSEATQQPEGA
DTEVTPVNEGQEKAEIGESNTENQVVQSEVSPDTTTSQSGTSLSNHSTEELGAETSPDLS
NGLSPKAPPLLRELDTELLQSGKLMLTGTVDRLGRAVVVTETHLPEDSCRADEMGRVLAC
YHRITRSSAKERGLTVIVDSRQSPPSALCLAALKQLQAVVPGGLGSVLILVEEQHQESST
HSLEGVEVHTVRGTGVLQQYIDRQQLPREMDGDYKHCHSDWLAFRLSVESLTECCESALS
LLEDALQSMDTAPLPDCIKTVPLSVEKHRQLMTSILVDQRLTELQRKGGAWLAGLANGTS
GLAKRSPDCRAALAATSNLYDSVDDSLHRLVQVSNQRGSDLEALGRLAAMVDKLEKCERE
IEQVQDQLEDYREPPISLSRLSLKQQKFKTFRESANELHTETLAVLGDLESWSELDWGGL
IEVQVRVPPVRERLRDMSHCLSDCWTTLDNTQRLLSTLTEANQWCDVISSTSPSPSTPLS
SLPPIPPSRFQDARALALELGGGALLDLWSQTLERYQRTVAQVKPRLLQQAERGQNQGQA
RPKTPSASSLWDLMGPEGEGDWGVGAGGGEGGLQSWGSLASLFRPQTCSTLKIGEEKGNK
KEGTGGGGGGAGGGKFLQNLLHPAKKSPTEAPLPPKPPRKRHPSFDLQALLAPRRGPATA
RPVEPPVGAASRNSPLTWLGRRALTDPVIAAGMAAAVPGWREGGGGGGIGGGIGGVQGGS
GVLIRGVEVSSKEVVDYTGTPRQHVLLSRAERETGGERQGTTTAQSKLYLLWCRMLSSER
QYVAVLKGVEETYLPLLEGPETPSSLRGKADLLFPKWASLSSFHSQNLLPAMEGALLQSL
LQQDLFSKYREEFLQYSHYIRIQPELDSPLVTQAADFFKLRLPATPPLSPLSFPHCLQAP
TLRLEQYCDALEELGGLNPASDSSLSVLRHVQRHGEDLRASDLIVGCPVPVAERGELVRQ
GELLVCGGTRRKKTGVRSVFLYQHLIIFTKQKSPGPGRTAYSFKHSIKTGEMGLTQSVGE
EGVRFEVWVRQAPRIRDCLTLQCQSGEGRAAWTHDIAQLLWTHAIHNTELCLKETMCIGV
SSKILLDATGAPVTSELDSIYNLNDRVHSSCSDSSSVGSQKEGGSPASGRGQTQNQSPST
AV
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgggctcagaggcagtggaagattgtgtgcagggggctctctcgtccctctacccccca
ttcgagagcacagccccgcctctcctctctcaggttttctctgtgttagagtcgacttat
cagcatgacagtctgaggtacctgctggattacttcatcccagcaaaacaccttcttcac
aaactacagcagcatgcctgttctcagtatctgggttgtctgttcctccactccggttgg
cccctctgcctcggagagaagattgtggtccagctctctactctggactggaggctgctg
cgcagtaccgacttctacttgcaggtggttcccttctccacacgctgcccccgcctggcc
ctcaagtgtttggcccccgggggccgcaacgtccaagaggtcctggtgcccgagtcacag
caccctctggtgttcactacagagtggctgcacagtgtcaacaaggagaggggctacaaa
agagaaggaggtggagggttagatacgtgtctggtcagtacgtgtgacggggtggtccgc
ctaccgtgggaggaggtggtctaccccaagttcatccataacccatcggacgacctgact
accatggctgaccacccaacctccgtctccaaccacaccaccgacctcaccccggtggtg
ggcctcggcctgggtggctgggggggctcctcctctggagaaccagactcctgttcctgg
gacgaagaagacgatgacctacctccagacagtgtagatgcagaggccgttctaccccgc
cgacggtgcagcgaggacgggttagggaggacgacgaggcatcaccaaatggctggtgat
ggggactacgtggaactcctggagcccagggggggtccggacggcggcgcagacccaagg
cagaggtacctggagatgcatgggatctgtaagaccaagaccctgccgctgtgtagaagg
agcaaggctatcaagctccgcagagggaaggcctgggggtacgggcgactggacgcagcc
gggggcagtcggggcgtcctggggggtaagagggactctgtgacccaccggggggactgg
ttacccccccgccccctgcctagagttatcgatgtaggccgagcgagacggtctgagtcg
tacccctcctcgcttcagaactctgacgaaggggagaaacaggccctcggaaaagaccca
gaaggcctaggaagccaggggctgtattttgatggtccgtccaaggagaggaggcccggg
gtgggcagggagagggagggcagtgggtgtaacgttacacaaccatgcagggacagccat
ggaagtaacagtttggtagcgagcgagacaacaaatcccaaagcagcgcacgttgtagag
ggccaatcggatcaaagatctcgctctgaatctgtgtttgaggatgctgataagtcactg
agtggagacagcgacaccatgcccactacagacacacgaggaagtggggagaatgcggcg
cggccattgattgatattccaggaaatggggagaatgtggacagcccgttagcagatgga
tctgaaacccagaaaggaagacattccactggtgactcttgtgtaccagacaaaacagca
gactcgacagaacacagagggacggaacgttctctctctcgacccggtactgacgctgac
ccaaagggagcaacaactccagaagagagggctgaaggaaagacggaggagataggagtg
tgtcctagaggaaaggaagtcaaaacgggaggattcagggcccccaggaggaagaggaaa
gggagagggggaaaggggaaggctaaaagtgggtgtcgtggcaaccagaagactcgagac
caggccggttccaaaccaccaagtaaaacacctcagcgtggtcccgccatctcctcgaca
accaacttgccaatcactacaaccagcctatcagaggcaacacagcagcctgagggggcg
gatacagaggtcacaccagtcaatgaaggacaagaaaaagctgagattggggaaagcaat
acagaaaaccaggttgtccaatcagaagtctcacctgacacaactactagccaatcaggc
acatccttatctaaccactctacagaggagttaggggcagagacatctcctgacctatca
aatggcctatcacctaaagcccctcctctcctaagggaattggacacagaactcctccaa
tcaggaaagctgatgttgacaggtacggtggacaggctgggacgggctgtggttgtcact
gaaacgcacctcccagaggacagttgccgtgcggacgagatgggccgtgtcttggcctgt
tatcacaggatcacccgctcttctgctaaagagcgaggcctaacagtaatagtagacagt
agacaatctcctccctccgctctctgcctcgctgcactgaaacaattacaggctgtggtc
ccgggaggtcttggctctgtcctcattctggtggaggagcagcaccaggagtcatctaca
cacagtctagaaggagttgaggtgcacacggtgcgagggacaggggtccttcagcagtat
atagacaggcagcagctgccccgggagatggacggagactataaacattgccactctgac
tggctggccttcagactgagtgtggagagtctaactgagtgttgtgagagtgcactctct
ctgttggaggatgcactgcagtctatggacacagcaccactaccagactgtatcaagact
gttcctctaagtgtggaaaaacacagacagctgatgacgagcatcctagtcgaccaacgg
ctgactgagctgcagcgcaagggtggggcctggctggcagggctggccaatggcacatca
ggactggcaaagcggtccccagactgcagagctgctctggctgcgacctctaacctctat
gacagcgtggatgattccctccaccgcctcgtccaggtgtccaatcagaggggcagtgat
ctggaagccctcggacgattggctgccatggtggacaagctggaaaagtgcgagagggag
atagagcaggtccaggatcagttggaagactacagggagcctcccatctctctcagcagg
ctctccctcaaacagcagaagttcaagactttcagagagtcggccaacgagctgcacact
gagaccctggcggtccttggagatctggagagctggtctgagctggactgggggggactg
atagaggtgcaggtcagggtacccccggtcagagagagactcagagacatgtctcactgt
ctgtctgactgctggacaacactggacaacacacagagactactgtccacactgaccgag
gccaaccagtggtgcgacgtcatctcctccacctcaccctccccctccacccccctctcc
tccctccctcccattccaccatctcgttttcaggacgcccgtgccttagccttggagctg
ggtggtggagctctcctggacctgtggtctcagacccttgagagataccaacgcactgtg
gcccaggtcaaacccaggcttctgcagcaggcagagcgagggcagaaccagggccaggcc
cggcccaagaccccctccgcctccagtctgtgggacctgatggggcccgagggagaggga
gactggggtgtcggagccgggggaggggagggaggcctccagtcctgggggtccctggct
tcactgtttcgcccacagacctgctccacgctgaagataggagaggagaaagggaataag
aaggagggaacgggaggaggtggaggaggagcgggaggagggaaatttctgcagaatctg
ttgcatccggcaaaaaagagccccacagaagcccctctgccccccaaaccccccaggaag
cgtcaccccagcttcgacctccaggccctgctggccccccgtcggggccctgccaccgcc
aggcctgtagagcctcctgtgggtgcagccagccgtaactcccccctcacctggctgggg
cgccgggccctcacagaccctgttatcgccgctgggatggcagccgccgtccccggatgg
agagagggaggaggaggaggagggattgggggaggaataggaggggtgcaggggggatca
ggagtgctcatcagaggtgtagaggtgagcagcaaggaagtggtggactacaccgggacg
ccaagacaacacgtgctgctgagccgagcggagagggagacgggaggggagaggcagggc
accaccaccgcacagagtaaactgtacctattgtggtgcaggatgctgagttcagagagg
cagtacgtggctgtattaaagggggtggaagagacctacttgcccctcctggagggtcca
gaaaccccctcctccctcagggggaaagcagacctcctgttccccaaatgggccagcctc
agctccttccactcacagaacctcctcccagccatggagggagctctactgcagagtctg
ctgcaacaggacctcttcagtaaatacagagaggagtttctccagtactctcactacatc
aggattcaaccagaattggactccccgttggttactcaagctgcggacttcttcaagctc
agactcccggccacccctcctctctcccccctgtcgttcccccattgtctccaggcccct
acactgagactggaacagtactgcgatgccttggaagagctgggagggctaaaccctgcc
tccgactcctccctctctgtcctcagacacgtccagcgtcacggcgaggacctccgggcc
agcgacctaatcgtcgggtgtccggtcccagtggcggagcgcggagagctggtgcgtcag
ggggagctgttggtgtgtggggggaccaggaggaagaagacaggggtgaggagtgtgttc
ctctatcagcacctcatcatcttcaccaagcagaagagtcccggcccaggacgcaccgcc
tacagcttcaaacacagcatcaagacgggtgagatgggtctgacccagagtgtgggtgag
gaaggggtgaggttcgaggtgtgggtgcgtcaggcccctcgtatccgggactgcctgacc
ctgcagtgtcagagtggagaggggagggcagcctggacacacgacatcgctcagctcctc
tggactcacgctatacacaacacagagttgtgtttgaaagagacaatgtgtatcggtgtg
tctagtaagatactgctagacgccacaggagcaccggtaacatctgaactcgactctatc
tacaatctgaatgacagagtccacagtagctgttcagactcttcctctgttggcagtcag
aaggagggggggtccccagcctctgggaggggacaaacacagaaccagtctccttccact
gcggtgtaa
DBGET
integrated database retrieval system
