Oncorhynchus keta (chum salmon): 118392355
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Entry
118392355 CDS
T09424
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
118392355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118392355
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
118392355
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
118392355
NCBI-ProteinID:
XP_035640162
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Position
13:complement(41349873..41526575)
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AA seq
730 aa
AA seq
DB search
MPRNFIRGTLPKENESRLCRMEPVARERGTTENGGSSSTREQRSSCSSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSYLTGVIDGSFEMGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMAVGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPSSQASGDPLSE
APSTGTVGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQ
TIAVIGPVFGYLLGSLCAKIYVDIGFVNMESITISPGDARWVGAWWLGYLVAGVITLLSA
IPFWFLPRSLPIPSDRGPAQCTPEQTSFIKDSPLLEHKYQADEPAGFLEMAKDFIPTLKT
LLGNPVYFIYLCVTIIQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIF
TGGLLMKRLKLSIMGAAKFAFGTSLIGYFLSLFFFVMSCENVKVAGITLPYNRAGGVSYE
ERSVFSACNSDCVCSGRDWDPVCGENGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVAAG
MSSGNLTASVGHCPHRDDCDRIFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLA
LGFHTLSTRTLAGIPAPIYFGAVIDTTCLKWGQKSCGGRGACRIYNTTAYRIAYLGLTMG
LRTVSFLLCILGFVLLKRHLRREECRAHQVANGGAEMEALRKEEVLASNSDQSLQTSTTD
YNNTERETRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatttcattaggggaactttgcccaaggaaaacgagagccgtctgtgtagg
atggagccggtggccagggagagagggacaacagagaacggaggcagctcctctacgagg
gagcaacgctcctcctgctccagcctcaagatgttccttgtggccctatcgtttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagaggcgc
tttgacatccccagttacctaacaggtgtcatcgacgggagctttgagatgggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagca
atgggctgtgtactgatggcagtgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataagttcgaaacgtcaatccgatcgtcagtgaattcaaccaataacctctct
ccatgtccagcgcgcctgttgtcaccctcctcgcaagcttcgggtgacccgctttctgag
gcaccaagcacagggacagtaggttgtgaaggagagtccaacctctccatgtggatctat
gtgttcctggggaatgtcttacgagggatcggggagactccagtgcagccccttgggatc
tcgtatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcag
accatagcagtcattggtcctgtgtttggctatttactgggatctctatgtgccaaaata
tatgtggacattggatttgtcaacatggagagtatcaccataagccctggtgatgctcgc
tgggtgggggcctggtggttaggttaccttgtagctggggtaatcaccctgctttcagcc
atccccttctggttcctgccccgttccctgcccatcccatcagaccgaggcccagcccag
tgcaccccggagcagactagcttcatcaaagactcccctctcctggagcataagtaccaa
gccgacgagccagctggctttctggagatggccaaagatttcataccaacgttgaaaacc
ctcctggggaacccagtgtacttcatctacctgtgtgtgaccatcattcagctgaactct
ctcatcggcatggtaacctacaagcccaaatacatagagcaacattacggacagtccgca
tcaaaagccaatttcctgatgggtacaatcaacatccctgccgtggcgttgggaattttc
actggcggcctgctcatgaagaggctgaagctgagcatcatgggagcagccaagtttgcg
ttcggcacctctctgataggctacttcctatccctcttcttcttcgtcatgagctgcgag
aacgtcaaagtggctgggatcacgctgccctacaacagggcgggtggtgtatcgtatgag
gagcgctcagtattctcagcctgtaactccgactgtgtttgttcaggcagagactgggac
cctgtctgtggagaaaacggcatcacgtacgtctctccctgcctggctggctgccagacc
tccacaggatcagggaagaacacggtgttctctaactgtagctgtgtggtggcagcagga
atgagcagtggtaacctgacagccagtgtaggccactgtcctcacagagacgactgtgac
cgtatcttcccttacttcctggctctttctgtcatcacttcctttatcatctccctgggt
ggcacgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttagct
ctggggttccatactctgtccacacgtacacttgcgggcatcccagcgcccatctacttt
ggggcggtcatcgacaccacgtgtctgaagtggggacagaagagttgcggagggagagga
gcctgtcggatatacaacactacagcatacaggatagcttacctgggtctgactatgggc
ctgaggacagtttcctttctgctgtgtatactgggattcgtgctgctcaaacgacacctg
cggagagaggaatgccgcgcccaccaagtggccaatggcggagcagagatggaggcactc
aggaaagaggaggtcctagcctccaactcggaccaatcgctacagacttccacaacagac
tacaacaacacagagagagagacacggctgtga
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