Oncorhynchus keta (chum salmon): 118392406
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Entry
118392406 CDS
T09424
Symbol
rbm17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118392406 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118392406 (rbm17)
Spliceosome [BR:
oke03041
]
Complex A
U2 snRNP components
U2 related factors
118392406 (rbm17)
Complex B
118392406 (rbm17)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
118392406
NCBI-ProteinID:
XP_035640261
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Position
13:44581423..44598147
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AA seq
430 aa
AA seq
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MSLYDDMGVGSATSDTKTEGWSKNFKLLQSQLKVKKAALTQAKSQRMKQGTVLAPVIDLK
RGGSADDRQIIDTPPHIAAGLKDTAPSGFSSGDALIPLADEYDPMFPNDYEKVVKRHREE
RQRQREQERLKEIEEREKKRKDRHEGSSAPSGFSRFPAAEGESDEEEEDYEKEKRKRSMG
GAAIAPPSSLVDSRDSSSYSYEDELRPSRGSKAAIPPPMYEDSDRPRSPPGGPTNSFLAN
MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDATEKTPGSSNQT
AAAEPLGWGSASIVDPSKKSEANPLTEILKCPTKVVLLRNMVGRGEVDEDLEGETKEECE
KYGKVIKCVIFEIAQVTDDEAVRIFLEFERVESAIKAVVDLNGRFFGGRVVKACFYNQDK
FRVLDLGEQM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttacgatgacatgggcgtcgggagtgcgaccagtgacaccaagaccgagggc
tggtccaagaattttaagctactgcagtcacagctgaaagtaaaaaaagcagctctgact
caagctaagagtcagcggatgaagcagggtactgtcctggctccagtcatcgacttaaag
agaggaggttccgctgatgacagacagataatagacacacccccacacattgcagcagga
ctcaaggatacagcacccagcgggttctcctcgggggacgcgctaatccccctggctgat
gagtatgaccccatgttccccaacgactacgagaaggtggtgaagagacatcgcgaggag
aggcagaggcagagagagcaggaacgactgaaggagatagaggaaagagagaaaaagagg
aaggaccgacacgagggcagcagcgctccgagcggattctcccgcttccccgcggcagag
ggagagtcagatgaggaggaggaggactatgagaaggagaagagaaaaaggagtatgggt
ggagctgccatcgccccaccctcatcgctcgtggatagtagagacagctcgtcatactcc
tatgaggatgagctgcgaccctcccgtggttctaaagcagccatccctccccccatgtac
gaggactccgaccgcccccgctcgccacctggcggtcccaccaactcgttcctggccaac
atgggagggaccgtggcccataagatcatgcagaagtatggcttccgggagggccagggg
ctgggcaaacacgagcagggtctcagcacggccctgtctgtagagaagaccagcaagagg
ggtggcaagatcatcataggagacgccactgagaagacaccaggatccagtaaccagacg
gcagcagctgagcctttaggctggggctcggcttcaatagtggacccctccaagaagtca
gaggccaaccccctcacagagatcctcaaatgccctaccaaagttgtgctgctacggaac
atggtgggcagaggagaggtggatgaagatttggaaggggagaccaaagaagagtgtgag
aaatatggcaaggtcatcaagtgtgtcatctttgagattgcccaggtgacagatgatgaa
gcagtgaggatatttctggagtttgaaagagtcgagtctgccatcaaagctgtggtggat
ctgaacgggaggttctttggtggtcgggtggtaaaagcctgcttctataaccaggataag
ttccgagtgttggacctgggagagcagatgtga
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