Oncorhynchus keta (chum salmon): 118392432
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Entry
118392432 CDS
T09424
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118392432
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
118392432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
118392432
NCBI-ProteinID:
XP_052316269
EnsemblRapid:
ENSOKEG00005006683
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All DBs
Position
13:complement(46357926..46363654)
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AA seq
779 aa
AA seq
DB search
MSLLSTKKLRCYFPHLFNLIEKTGYAVATMLGTSTSTEQGAMENPIVLEMCRMSPLTFED
TPELISSVAPDTVEGLIKAKKKKNKALSEQGPEEPAIEHNQKDGHRLTVEKRGKDPKHKE
QTVTELEVVEKERKKRIKGNEEKQPNVIQDEMEVLDPEEQTGGKTKKKSKNLQTQQVGAD
LVIADENNMNSRKKKKRKHNDIEPERVIDSVLSKAEVDVSAVTAPDEARKSKKKHKNRQT
ELEEGGESCLTVSRTADDPKIKELHPEMVKRGKNVVTEAEENVKKRKRNKKEHTESELND
CPDKADLPGIKEQTERKLKSKRPKTDGESAAVEGSGRKKKHSRVSDKGMDSVHSAADVFD
LAVPNDNGTHDAGTNGETEGAHSTMVETGTQHNKSCLKKETLVVDDWQALNDLKDFIPNV
ESKSVYEIHKRIKYDLDRFKEFRRQGLSLRSGRFNAQENERLKSNVYDFLSLTGIQSGSE
LFHPQRFKGEEANIKKLKRQHRFHERIGEGIPRPWHQIYIRGRKMFDGSNYKGRFTEEEL
HTLKKLQALHGNKWAKISALTGRSESALEKRFAQMSANRGVWTEEELKRLMEAVRKHLVG
QAEPGSGPATVRKDHLYNNIPWTDVCQTVETRHWSQCRIKWLGVLKHKMAYGQPVFSGHT
KSLQGKVDLIKALNAMQVEDVADINWEEIARTIGDVTPRYVQTHYYRLKVANVPLWQSMS
FCEIIDFLNSRVLPNCEERLNVLIKSGEVVSRNDPQELFLLSEIFDNEDGDYYSDVQNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgtcaacaaagaagttacggtgttactttccccacttgttcaacctgata
gagaaaacaggttatgctgtagccaccatgctggggacttcaacatccactgaacagggg
gctatggagaatcccatagtgcttgagatgtgtcgaatgtcccctcttacatttgaagac
actcctgaattaatctcatcagtggcacctgatacagtcgagggattaataaaagccaaa
aagaaaaagaataaagcactatctgaacagggaccagaagaaccggcaattgagcataat
caaaaggatggtcaccggttgacagtcgagaaaagaggtaaagaccctaaacataaagag
caaacagtgactgagctggaagtggtggagaaagagaggaagaaacgtataaaaggaaac
gaagagaagcagccaaatgttattcaagatgaaatggaggtactagatcccgaggaacaa
actggagggaaaacaaagaaaaagtcaaagaatcttcaaacacaacaggtgggagcggat
ttagtgattgctgatgagaataatatgaatagccggaagaagaagaagagaaaacataat
gacattgagccagaacgggtgatagacagtgtcctctcaaaggctgaggtagacgtttca
gctgtaactgcgccagatgaggccagaaagagtaagaagaagcacaagaacagacaaaca
gaacttgaggagggaggggaaagctgtctgacagtttcaagaacagcagatgatccaaaa
atcaaagaactgcaccctgaaatggtcaagagaggtaaaaatgtggtaactgaggcagag
gagaatgtaaaaaaaaggaaacgaaataagaaagaacacacagagagtgaactgaacgat
tgtccagataaagcagaccttccagggataaaagaacaaactgaaagaaaattgaagtca
aagaggccaaaaacggatggagagtctgcagctgtggagggcagcgggagaaagaaaaaa
cacagcagagtgtcagacaagggaatggacagtgtccactctgcagcagatgtttttgat
ttagctgttccaaatgacaacgggactcatgatgctggaacaaacggtgagacagagggt
gcccattcaaccatggttgagacagggacccaacacaacaaatcctgcctaaagaaagaa
actctcgttgtggacgactggcaggctctgaatgatctcaaagacttcattcccaatgtt
gagtcaaagtctgtttacgagatccataagaggataaagtatgatcttgatcgattcaag
gaattccgaagacaaggcctttccctgcgaagtggaagattcaatgcgcaggagaacgaa
cgactcaagagtaacgtctacgacttcctgtctctcactgggattcagagtggctctgag
ctcttccatccacagcgcttcaaaggggaagaagcaaatatcaagaaattgaagaggcag
cacagattccatgaaagaataggtgaaggaatacccaggccttggcatcaaatctatata
cgtgggaggaaaatgtttgatggcagcaactacaagggcaggttcaccgaagaagagctt
cacactttgaaaaaactacaggcgttgcacggcaacaagtgggcgaagatctcggcgttg
actggccgaagcgaatcggccctagagaaacgttttgctcaaatgtctgcaaaccgaggc
gtgtggaccgaggaagaactgaaaagactaatggaagctgtgcggaagcacctggtggga
caggcagagcctggcagtggaccagccaccgtcaggaaagaccatctgtacaacaacatc
ccctggacagatgtgtgccagacggttgaaacacgccactggtcccagtgtcgaataaaa
tggttgggtgttttgaagcacaaaatggcatatggacaaccagtattcagtggacacact
aaatcattacagggcaaagtggatttgatcaaagccttgaatgcaatgcaggtggaagat
gttgcagatatcaactgggaagaaattgctcgcacaattggggatgttacgccacgctac
gtacagacacactactacaggctaaaggtagccaacgttccgttgtggcagagcatgtcc
ttctgtgagatcattgacttcctcaacagtagagttctccctaattgtgaagagcgcctc
aacgttctgataaagtcaggagaggtggtgtccagaaatgatcctcaagagctcttccta
ctctctgagatatttgataacgaggatggcgactactacagcgacgttcagaacagctga
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