Oncorhynchus keta (chum salmon): 118392581
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Entry
118392581 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118392581
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
118392581
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_20
IQ_SEC7_PH
PH_13
MCM_OB
FYVE_2
Motif
Other DBs
NCBI-GeneID:
118392581
NCBI-ProteinID:
XP_052316647
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All DBs
Position
13:47619839..47641986
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AA seq
1360 aa
AA seq
DB search
MRIVILHLILKDLQCRNECLIFNAEVCVKKPPVAPKPKLAPSVKLSPPPIAPKPDLLVSQ
PSQPSPLLTQPSPAVLKRAKPAVAPKPCLSKPSAPPAPASPPPLRPRVPQTPSQECRGAG
DDSLSFRNSRNGILSQPILCDSDYIIPTCSCGLQDCSQCKRLGNGNITVVGSNTLGSWLN
GNATESTGTLVANLPGKTENGDSEESGGVTNTLHLRLKDKPQRQEGQRDGEGSRNEEKLQ
GNKEERQKNQKGQEGQQYQTGSGDQSCNVLEVAETLTQTETKASNAEHTYTDSCNIDCNE
TDTIPTPLILPLEVSPIRNPPQTVPPTCTPSQTVPPTRTPSQIVPPTRTPPHILPPTLAP
SQVDSEPDSTPPHTDNSTQCSRIPRLPTDLSFPAAPSKPLPVPLPRKPRKPALVRQDGLE
ARTQEGETKNRTQGGETEVSLPRLHRAIHCPPSLNRNTSHSLDLLSQPELNALTSERRGG
GEEEEEEKEEEVEEGYGDFERYPITRSLPKQIKLSCRPPPVGMTMKASSAEEGGSPRAPP
RKPQRHSLPAGAPPSITPPPPPPHHTNTPMRELPATPQEKPAWRFPRPFFSRQSSSRHSN
QQQPRAPQGKAALLGGKQRAQSFSSADLLARADGTKRSLSFRKLLELRLSVRMLPRLLTR
SGESLDCTSVEPGGRTGMVDQSNGSVGVSGGDGEGSVEYENVPLYEEIPEYMNLPFLSAR
LGWPLTHSLDPSTHRHSDSDVYEVQDPYESHCDYKRPHSIDYERGWHGLDDAHSEEEVHS
SDEDDNSSTSSKEHLELSEEDRQQEDEVKRKKLVHIAQEIMSSEKVFVDVLKLLHIDFRD
AVAKATRQNGKPVVEERILTQILYYLPQLYQLNRDLLRELEERVAHWGDHQRLADIFVQK
GPYLKMYSTYIRQFDNNVAMLDEQCRKNPGFATVVREFEMSPRCASLALKHYLLKPVQRI
PQYQLLLTDYLKNLPEDSADYKDTQAALGIVKEVANHANDIMKQGDNFQKLMHIQYSLNG
QHEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLFNDTLLYTTPVQSGQYKLNSMLSLAGMK
VSKPSQEAYQNELNIESVERSFILSASSATERDEWQVAIATAIDDHTRKKITFISSRSQE
EADGVCDSGAPLGSKAPIWIPDLRATMCMVCTCEFTLTWRRHHCRACGKVVCQTCSSNKF
YLEYLKNQPARVCDHCFVKLQENSDRVASGALSPTARSGGFSFSRKQKKIPAALKEVSAN
TENSSMSGYLQRSKGNKKQWKRLWFVIKNKVLYTYAASEDVAALESQPLLGFFLREEKCG
PFQKLQFKLYHKNTLFYIFKADDIPTAQRWIEAFQEAMIL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgtcattcttcacctgatattgaaggaccttcaatgcaggaacgagtgtctc
atattcaatgcagaggtctgtgtgaagaagccgccagtggctcccaaacccaaactcgcc
ccctcggtgaagctctcgcctcctcccatcgctcccaaacctgatcttctcgtctcccag
ccttcccaaccctccccccttcttacccaaccctcccctgccgtgctaaagagagccaaa
cctgctgtggcgcccaaaccatgcctctccaaaccctctgcccctccagccccggcttct
cccccacccctcagacccagagtaccccaaaccccatcccaggagtgccggggggctggg
gatgacagcctctccttccgcaactccagaaacgggatcctgtcgcagcccatcctgtgc
gactcggactacatcattcctacgtgctcctgtggactccaggactgctcccaatgcaaa
cgactagggaatgggaacattacagtggtcgggagcaatacgctcggctcctggctaaac
gggaatgccacggaaagcactggaacactggtagccaatctgccgggtaaaacagagaac
ggagacagtgaggagagcgggggagtgaccaacaccctccatctcaggctcaaggacaaa
cctcagagacaggaggggcagagggatggagaggggagcaggaatgaagagaagctgcag
gggaacaaagaggagagacagaagaaccagaaaggacaggagggtcagcagtatcagact
ggttcaggggaccagtcatgtaatgttcttgaggtggcagagacacttacacagactgag
actaaagcttctaatgcagaacatacatacactgacagctgtaatatagactgcaatgag
accgacaccattcccactcccctcatcctcccactggaagtctcccctatccgcaacccc
ccacagacagtccctcccacctgcaccccctctcagacagtccctcccacccgcaccccc
tctcagatagttccacccacccgcacccccccgcacattttaccccccaccctcgccccc
tcccaggtggacagtgagcctgacagcacccccccccacacagacaatagtacacagtgt
tccagaatacccaggctacccactgacctctcgttccctgccgctcccagtaagcccctg
cccgtgccgctgccacgtaagccccgtaagccagccctggtaaggcaggacggcctggag
gccagaacccaggagggagagacaaagaaccgcacacaggggggagagacagaagtctct
ctcccccgcctccacagagccatccactgtcccccctccctcaaccgaaacacctcccac
tctctggacttgctctctcagcctgagctcaatgcactgacctcagagagaagaggagga
ggagaggaggaagaggaggagaaggaagaagaagttgaggaagggtacggagactttgag
cgctaccccatcacccggagcctgcccaaacagatcaagctcagctgccgcccgcccccc
gtcggtatgacaatgaaggccagctcagcggaagagggagggtcacccagggccccgccc
aggaagccccagagacacagcctgccagcgggtgcccccccgtccatcacaccccctcca
ccccctccgcaccacaccaacacccccatgagggagctgcctgccaccccacaggagaaa
ccagcctggcgcttcccaaggcccttcttcagcaggcagagctcctccagacacagcaac
cagcagcagccgagggccccccaggggaaagcagctctgctgggagggaaacagagggca
cagtccttctcctcggctgacctgctggcccgcgccgacggcaccaagaggagcctttct
ttccggaagcttctggagctgcggttgtctgtcaggatgttgccacggttactgaccagg
agcggcgagtctctggattgtaccagcgtggagccgggcggacggacggggatggtggac
cagtccaatggcagcgtgggggtgtctggcggggatggagaggggtcggtggagtatgag
aatgttcctctgtatgaggagataccggagtacatgaacctgcctttcctcagcgcacgg
ctgggctggccactcacacacagtctggacccaagcacacacagacacagtgactcagac
gtctatgaggtgcaggatccatacgagagccactgcgactataagcgaccccattccatt
gactatgagaggggctggcatggattggatgatgctcactctgaggaggaagtccacagc
tctgacgaggatgacaacagctccacctccagcaaggagcacctggagctgtcagaagaa
gacagacagcaggaggatgaggtgaagaggaaaaagctggtgcatatcgcccaggagatc
atgagctctgagaaagtgtttgtggacgtcctgaagcttcttcacatagatttccgggat
gcagttgccaaggcgacgcgacagaacggcaagccggtggttgaagagcgtattctaacc
caaatcctctactacctgcctcaactataccagctcaaccgagacctgctccgggagcta
gaggagagagtggcccactggggggaccaccagaggctggcagacatctttgttcagaag
gggccgtacctgaagatgtactccacctacatccggcagtttgacaacaacgtggctatg
ctggatgaacagtgtaggaaaaaccctggcttcgcaactgtggtccgggagtttgagatg
agtcctcgatgtgccagcctggctctgaagcactacctgctgaaacctgtacagagaatc
ccccagtatcagcttctgctcacagattatctgaagaaccttcctgaggactcggctgac
tacaaagacacgcaggctgctctgggcatagtgaaggaggtggccaaccatgccaacgac
atcatgaaacaaggggataactttcagaagctgatgcacattcagtacagtctgaacgga
cagcatgagattgttcagccgggcagggtgtttcttaaggagggcactctgatgaagctg
tccaggaaggtcatgcagccacggatgttcttcctgttcaatgacactcttctgtacacc
actccagttcagtctggtcagtataaactcaacagcatgctctctctggcgggcatgaag
gtgagtaagcccagtcaggaggcgtatcagaatgaactgaacattgagagtgtggagcgt
tccttcatcctgtctgccagctcggccacagagagagatgagtggcaggtggccatcgcc
acggcgatagacgaccacaccaggaagaagatcaccttcatctccagccggagtcaggag
gaggctgatggtgtgtgtgacagtggggccccgctgggttctaaggcccctatctggatc
ccagacctgagggccaccatgtgtatggtctgtacctgtgagttcaccctcacctggaga
cgccaccactgccgagcctgcgggaaggttgtgtgtcagacgtgctcgtccaataagttc
tatctagagtacttgaagaaccagccggctcgtgtgtgtgaccactgcttcgtcaagcta
caggagaacagtgaccgtgttgcttctggggcgctgtctcctactgccagatctggggga
ttctctttctccaggaaacagaagaagatcccagctgctctcaaagaggtgtctgcaaac
acagagaactcctccatgagtggctacctacagaggtcgaagggcaacaagaagcaatgg
aagaggctatggttcgtcatcaagaacaaagtcctgtacacctacgccgccagcgaggac
gtagctgctctagagagccagcctctgctaggattcttcctgcgggaggagaagtgtggc
cctttccagaagctgcagtttaaactgtaccacaaaaacaccctgttctatatcttcaag
gctgacgacatccccactgcacagaggtggatagaggctttccaggaggccatgattctt
taa
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