Oncorhynchus keta (chum salmon): 118392701
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Entry
118392701 CDS
T09424
Name
(RefSeq) neurexin-1-like
KO
K07377
neurexin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118392701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118392701
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118392701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
118392701
NCBI-ProteinID:
XP_052316700
LinkDB
All DBs
Position
13:13849105..15006694
Genome browser
AA seq
1666 aa
AA seq
DB search
MTSGLRFSALLMGPLVFLSLLVTARALEFGGAPGQWARYGRWEAGSLGELSFSLKTNISK
ALLLYLDDGGNCDFMELLIAGGRLQLRFAIHCAEPATLHMETQVNDDRWHMVLLTRNFRE
TLLMVDGETKMAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLK
VGETPPTLLNSQGIQSHMEYLCTKQNPCLNGGFCSIQYGEVHCDCTHTRYKGKYCKEAEE
YAVEGLAHLTLNNQGDSSQAGKEVSVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKN
NDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWNTKKTGSIS
FDFRTTEPSGLLLFSHGRTQGPKEQKPGRDMKSDYFAMELLDGFLYLLMDMGSGSIKLKT
SNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGGLPETRSDL
VLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQKRCSSTPC
GNGGLCKEGWNRYICDCTGTGYLGSNCEIEATVLSYDSSMYLKILIPGTMHTEAEDVALR
FMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPETVFAGQKLN
DNEWHTVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISVVPSNFI
GHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLALATLQAYAS
MHLFFQFKTTTSDGLLLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGNSDKPLNDN
QWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNSLPKLIASR
DGYQGCLASVDLNGKLPDLIADALHRMGQVERGCDGPSTTCTEDSCYNQGVCLQQWEGFS
CDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLKEAVLL
RVESAKGLGDYLELHICDMSACQSVSVSESVSVSRCLSVSLSLFEGERSESQSNVNLLPS
VFSKFSKGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQAFIKIGGGGGDKA
RHFQGQISGLYYNGLQVLKLAAEGDPNVQAQGNLRLVGDVPSVLTTDTTNTTPLADMSTT
IMETTTTMATTTTRKQRSPTMRDSVTQNTDDILVASAECPSDDEDLEECEPGNGGELVLP
IITVDSLEPPYATRYPVIPPPPTYRPFLETTKESLPLPNGRPPCPLDQEDCEEAGPIEVS
AYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPNEGSVQNPRDRHFSNRPPNSHRPPLSST
PTANPDQLGPRLNKPGGSSSNIPAGKMNTRDQVLLPPTHPSSDPDRHRHAPGVTYPPNFP
HVPTPDPTSPERGGPPGAVEVIRESTSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGS
YQVDQSRNYISNSATQSNGTLVKEKQPGTAKTTIKNKKNKDKEYYV
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtggattgaggttttccgctttgctcatggggcccttggtgttcctcagtctg
ctggtgacggcccgggcgctggagttcggcggggcccccggccagtgggcccgctacggg
cgctgggaggcgggctcgctgggcgagctgagcttcagcctcaagaccaacatcagcaag
gctctgttgctctatctagacgacggaggcaactgtgacttcatggagctcctgatcgct
ggagggcgcctccagctgcgctttgccatccactgtgccgagcccgccactttacacatg
gaaacccaggtcaacgacgaccgctggcacatggtgctcctcacccgcaacttccgcgag
actctgctgatggtggacggcgagaccaagatggcggaggtcaagtccaagcggaaggag
atggcggtggtcagcgacctgttcgtgggcggcatcccgcccgacgtgcgcctctcagcc
ctcacctccagcacggtgaagtacgagcccccgttcctgggcctgatctccaacctgaag
gtgggagagacaccccccaccctgctcaacagccagggcatccagagtcacatggagtac
ctgtgcaccaagcagaacccctgcctcaacggaggtttctgctccatccagtatggcgag
gtacactgtgactgcacgcacactcgctacaaggggaagtactgcaaggaagcagaagag
tatgctgttgaaggtctggcgcacctgacgttaaacaaccaaggggactcatcgcaggcc
gggaaggaagtgtcggtggccacattcaaggggaacgagttcttctgctatgacctgtcg
ctgacgcccatccagagcagcacggacgagatcacgctttcctttcgcacgctgcagcgc
aacggcctcatgctgcacacgggcaagtcggccgactacgtcaacctgtcgctgaagagc
ggcgccgtctggttggtcatcaacctgggctcgggggccttcgaggcgctggtggagccc
gtcaatgggaagttcaatgacaacgcctggcacgatgttcgcgtcacccgcaacctgcgc
caggtgaccatatcagtggatggtattttgaccactactggttatacccaggaggactat
accatgttgggatcagatgacttcttctacattggggggagtcccaatactgcagatctg
cccggatcacccgtcagcaacaacttcatgggctgccttaaagacgtggtatacaagaat
aacgacttcaagctagaactctcccggctggccatcgagcgggaccctaaaatcagcctg
aacggagatcttgttttccgctgtgaggacgtggccgccctggaccccgtcacctttgag
tccccagagtccttcatcgccctgcccaagtggaacaccaagaaaacaggctccatctcc
ttcgacttccgcaccacagaacccagcggcctgctcctgtttagccacgggcgcacccag
ggtcctaaagagcagaaaccaggtcgtgacatgaagtcagactacttcgccatggagctg
ttggatgggtttctctacctgctcatggacatgggatctgggagtatcaagctgaagacc
agtaataagaaggtgaacgacggggagtggtgccatgtggacttccagagggaagggagg
aaaggctccatctcagtgaacagccgcagtatccccttcaactccaacgagggcagtgag
atcctggacctggacagcgacatgttcctggggggtctccccgagacccgctctgacctg
gtgctgccccccgaggtctggaccgccctgcttaattacggctacgtgggctgcgtccgg
gacctcttcatcgacggcaagagccgcgacgtgcgccgcctggcagagatccagagctcc
ccgggcgtcagcagcttctgcacccgcgagcttcagaagaggtgtagcagcaccccctgt
gggaatggaggcctgtgtaaagagggatggaaccgctacatctgcgactgcaccggcacc
ggctacctgggcagcaactgtgaaatcgaggcgacggtgctgagctacgacagcagcatg
tacctgaagatcctcatccctggcaccatgcacaccgaggcagaggacgtggcgctgcgg
ttcatgtcccaaagggcctacggcctcctcatggccaccacctccaaagagtccgccgac
accctgcggctagagctggacggtggcagggtcaagctgaccgtcaacctagattgtatc
aggatagactgtaacctcagtaaaggtcccgagacggtcttcgccggccaaaagctcaac
gacaacgagtggcacacggtgaaagtggtacgcagaggaaagaacctccaactctctgtg
gacaatgtgacggtagaaggccaaatgacaggcgcccacacccgtctggagttccacaac
attgagacaggcatcatgacagagcgccgcttcatctccgtggtgccctccaacttcatc
ggtcacctccagggcctgacggtcaacggcgtgccctacctggaccagtgcaagaacggc
gacatctcctactgtgaactcaacgctcgcttcggcatgcgccacatcatcgccgatccg
gtgacgtttcgaacgaaagcgagctacctggcgttggctactttgcaggcctacgcctcc
atgcacctcttcttccagtttaagaccaccacgtcggacggcctgttgctcttcaactcg
ggggacggcagcgacttcatcgtcgtggagctggtcaaaggttacgtccattacgtcttt
gacctgggcaacggaccgtcactgatgaagggcaactcggacaagcctctcaatgacaac
cagtggcacaacgtggtggtctcccgggacgccaacaacgtgcacacgctcaagatcgac
tcccgcaccgtcacccagcactccaatggagcccgcaacctggacctcaaaggggagctg
tacatcggtggcgtagggaagagcatgtacaacagtctgcccaagctgatcgcgtcccgg
gacgggtaccagggctgcctggcctcagtggacctcaacgggaaactaccagacctgatc
gcagacgccctccacaggatgggccaggtggagcgaggctgcgacggacctagcaccacc
tgtacggaggactcctgctacaatcagggggtgtgtctccagcagtgggagggcttctcc
tgcgactgcaccatgacgtcctatggaggctccttctgtagcgaccctgggacaacctac
atcttcgggagaggaggagccctcatcacgtacacctggccccccaacgaccggccgagc
acgcgggcagaccggctggcggtgggcttcagcacgcagctcaaggaggccgtgctgctc
agggtggagagtgccaagggactgggagactacctggagctgcacatatgtgatatgtca
gcgtgccagagtgtctcggtgtcagagagtgtcagtgtgtctcggtgtctcagtgtgtct
ctcagcctatttgagggagagcgatcagagagccagagcaatgttaacctgctgccctct
gtcttttccaaattctctaaagggaactttgataatgaacgcctggctattgctagacaa
agaatcccataccggcttggtcgggtagttgacgagtggctactcgacaaaggtcgacag
ttgaccatcttcaacagccaggcgttcatcaagatcggtggtggtggcggcgacaaggcc
cgtcacttccagggccagatctcgggcctctactacaacgggctgcaggtgctcaagctg
gcggccgaaggcgaccccaacgtgcaggcccagggcaacctgcggctggtgggcgacgtg
ccctcggtgctcaccacagacaccactaacaccacgccgctggccgacatgtccaccacc
atcatggagacaaccaccacgatggctaccaccaccacccgcaagcagcgctcccccacc
atgagagacagtgtcacacagaacacggatgacatattggtagcgtctgctgagtgtccc
agcgatgacgaggacttggaggagtgtgagcctggaaatggaggtgaattagtgttgccc
attataactgtggactccctagaacccccctacgccacccgctaccccgtaatccccccg
ccccccacctaccgccccttcctcgaaaccaccaaagaatccctccccttgcccaacggc
cgccccccctgcccactggatcaggaggactgcgaggaggcgggacccatcgaggtgtcc
gcctacggctcgggcgagatgaccgagtcggacgatgaggactattacaaaaactccccc
ctcgtcaccgataggacggtcctcccccctccccccaacgagggcagcgtccagaacccc
cgcgaccgccacttctccaaccggccccctaactcccaccgcccccccttgtcgtccacc
cccacggccaaccctgaccagctaggccccaggctcaacaagccaggcggcagcagcagc
aacattcctgccggcaagatgaacacccgggatcaggtgctgctgccgcccacccacccc
tcctccgaccctgaccgccaccgccatgccccaggcgtaacctaccctcccaatttcccc
catgtgcccaccccagaccccacatccccggagagaggagggcctcccggcgcggtagag
gtgatcagggagtccaccagcaccacgggcatggtggtgggcatcgtggcggccgccgcc
ctctgcatcctcatcctgctctacgccatgtacaagtaccgtaaccgggacgagggctcc
taccaggtggaccagagccgtaactacatcagtaactcggccacgcagagcaacggcacc
ctggtgaaggagaagcagccaggcacagccaagacaaccatcaagaacaagaagaacaaa
gacaaggagtactatgtctga
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integrated database retrieval system