Oncorhynchus keta (chum salmon): 118392709
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Entry
118392709 CDS
T09424
Name
(RefSeq) multiple PDZ domain protein-like isoform X1
KO
K06095
multiple PDZ domain protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118392709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Shufflon_N
Motif
Other DBs
NCBI-GeneID:
118392709
NCBI-ProteinID:
XP_052315475
LinkDB
All DBs
Position
13:complement(19420893..19490118)
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AA seq
2084 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGGVTATFGDDLSECYTTAHANGSHPAYPESSTGTQINGKPSPEEFEHIIRSMAQGRYV
THMELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGNLKETDQILAIDGQP
LDQTVTHQQAIGILQRASERVQLTVARGPIPQLASPVVSRTPSAASTLSAYSSAAHWNHV
ETIELVNDGTGLGFGIVGGKNTGVIVKTILPGGIADQDGRLHSGDHILTIGDTDLYGMGS
EQVAQVLRQCGNRVKLVITRGPPEETSIVPMALPTVTEQQGYEEEEAESFDVGLTKNAQG
LGITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGYTNQQAVE
VLRHTGQTVHLKLVRSGFRPEDIPPAVVPSVIVLPPTPGGRDPTLERTDVVDTTAQGEKQ
YQALSGESDDSTVKDQLTKNTRDEAKLTEDEELELMKKWQETLGPSNKVVIAQVEKFSES
SGLGISLEANNGHHYIRSVLPEGPVGRCGKLISGDELLEVNGISLIGETHKEVVRILKEL
PVCVYMACFRPIPLLQSDRDSGQTELDEFSTEPKIKIQGDLSSFLVPGGSEGAATRENVT
EETLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVPEGVAERDG
RLLPGDRLMFVNSTNLDNASLEEAVQALKGANIGMVHIGVAKPLPPYNEEDSPSSSSGVS
FFLSSTLLVKESDEEEPAEDHLFRAEPALIDSNEGDLTDERALEHRFSGNEDDTLQASMI
ALHGSTCSADMDYQTTLQSSTPKRSARLDLLTEHPLVTLFGLADDTEPFSPEEKPIVFPL
PRSIGGHALTVDDNALTSSDQYLAHHLTQMEPSDLNSYSPYTNPEPGLNDLGEPVQSLHF
QVESTMAVEDIGEMEGLMKGDEPSVKQSKEEGDEVIITGSHFERTITVVKGNSSLGMTVS
TIKDALGMYIRSIIHGGSINRDGRLGVGDLILVINGESMANLTNTQARAMLRRHSLIGPD
LGSACAPEEDLCPFYVITYVPVEYLEEYKTSLEQPKDDICSDAPLAPIRGIPELPEREDG
EGEESELQTATFSNWNQPMKVELKREAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHIM
ADSPAGRNGTLKTGDRIVEVDGVDLSDASHEQAVEAIRRAGNPVVFLVQSIVHRPRPKSR
YSPTSSPVIEYSTALKRLPHHMCQSSTTDTNEERVARRNSDKPPKREAGKTSSTTPHLSL
PVVPHVGETDTDTLTEIPDRPSQTEEEDKFGYRWKNISQRYDSLPGLLHIIELEKGKTGL
GLSLAGNRDRSRMSVFVVGIDPSGAAGKDGRVVVGDELLEINGQILYGRSHQNASSIIKS
APSKVKIIFIRNTDALNQMAVGPVREHGDTLEPQTELETCSSIAPSAIDVDMFKYVQHVI
LLKEEGGFGITFSEDTKDGLVIQSITEKGPAGKDGSIKSGDQLLAVEDKPVMGYTVDRVH
SLLKKAKSSVKLTICTDKSSPLLPHCTGQATSLASIHRISMATLGQSESEPIRSSSRSST
PGTLASSDPVTCPIIPGCETTIDISKGRTGLGLSIVGGCDTLLGTIIIHEVYEDGAASKD
GRLWAGDQILEVNGIDLRVATHDEAINVLRQTPQRVRLSVYRDEAQYKEEDLWDAFTVEL
NKKPGQGLGLSIVGRRNDTGVFVSDIVKGGVVESDGRLMQGDQILSVNKEDVRNATQELV
AELLKCGVGPIVMEVGRFKAGPFHSERRFSQNSQMSETGSCKVTPHSLSASSGSLQVDCH
SLQHTHQESPDHQEIRSVEFTKGPTDSLGISIAGGVGSPLGDVPIFIAMINPTSLVVQTH
KLKIGDIIVSICGTATEGMSHSQAVTLLKNATGTVGLQVVAGSDTTVTGPFHEQTATGLS
VSGLTATSIFHDDLGPPQYKTITLDRGPDGLGFSIVGGFGSPHGDLPIYVKTVFGKGAAS
EDGHLKRGDQIMAVNEQSLEGVTHEDAVGILKRTKGTITLTVLS
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcggctccaggccaag
ctgaaggagcggggggaggtccccactgaggagaagctaagcttgctcaagtcggtgctc
caaagccccctgttccaccagattctggccctgcagaagtctgtccagctcctcaaagac
caggggggtggtgtcacagcaacatttggcgatgacctgagtgaatgctacacaacagcc
catgccaatggcagccatcctgcctacccagaatcctccactggtacacagatcaatggg
aagccatctcctgaggagtttgagcacatcattcgctccatggctcaggggcgctacgtg
acacacatggagctggtgaagccgctgtctgggggcctaggcttcagcgtggttggtctg
aggagtgagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtg
gcccactgcgatgggaatctgaaggagacagaccagatcttggccatagacggtcagccc
ctggaccagacagtgacccaccagcaggccataggcatcctgcagagagcgtctgagcgt
gtgcagcttactgtggccagaggacccatccctcagctggccagccccgtggtgtcccgc
acgccctccgctgcaagcaccctgtctgcctactccagtgcggcccactggaatcatgtg
gagaccatcgagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaag
aacaccggtgtcattgtcaaaaccatcctgcctggaggcatcgctgatcaggatgggcgt
ctgcacagtggggaccacatcctcacgattggggacactgacctttatggcatgggcagt
gagcaggtggctcaggtcctgaggcagtgtggtaacagagtgaagctggtcatcaccaga
ggccctccagaggagacctccatcgtcccaatggcgttgcccactgtcacagagcaacag
ggctatgaggaagaggaggctgaatcgttcgacgtcgggctgaccaagaacgcccagggt
ctgggaatcactatcgccggctatgtgggggacaaaaattccgagccctctggtattttc
gtgaaaagtataactaaagacagtgcagtagagcaagatggccgcatccatgttggggac
cagatcatagccgtggacgggatgaatatccagggctacaccaaccagcaggccgtggag
gtgctgagacacacgggccagacggttcacctgaagctggtcagaagtggcttccgtcca
gaggacatcccacccgctgtggtgcccagtgtgattgtacttccaccaaccccagggggc
cgagaccccacactggagagaacagatgttgtggacaccaccgctcaaggtgagaaacag
taccaggcattgagtggggaatcggatgactccactgtgaaggatcagttaactaagaac
accagagacgaagcaaagttaacagaagatgaagagttggagctgatgaagaagtggcag
gagacgctcggccccagcaacaaagtagtgattgcccaggtggagaagttcagtgagagc
agtggtctgggcatcagtctggaggccaacaacgggcaccactacatccgctctgtcctg
cccgaggggccagtgggccgctgtgggaaactcatcagtggggatgaactgctcgaggtc
aatggaatatccctgattggtgagacccacaaggaagtggtgaggattctgaaggagctt
cctgtctgtgtctacatggcctgctttaggcccatccctctccttcagagtgacagggat
tctggccaaacagagttggatgaattttccactgaacctaaaattaagatacagggagac
ctcagcagtttcctggttcccggaggttccgagggggcggcaacaagggaaaatgtgacg
gaggagactctgggagctcctttggccatgtgggagacggaaatacaggacatcgagctg
gagaagggagagagtggactgggattcagcatcttggactaccaggacccaatggatccg
gccaagacagtgatcgtgattcgatctctggtgccagaaggagttgccgaacgggatggc
aggcttttgccaggcgatcggctcatgttcgtcaacagcaccaatctggacaacgccagt
ctggaggaagccgtccaggcactgaagggggccaacattggcatggttcacattggggtg
gccaagccactgcctccatacaatgaagaggacagtccgtcatcatcctctggagtcagt
ttttttttatcttcaacactgctggttaaagaaagcgatgaggaggagccagcggaggat
caccttttccgggcagagcctgcattgattgactccaatgagggagacctgaccgatgag
agggcattggagcatcgcttctctggcaatgaggatgacaccttacaggcatccatgatc
gccctgcacggcagcacctgcagcgccgatatggactaccagactaccttgcagtcctcc
acacccaaacggagtgctcgcctggacttgttgactgagcatcccttggtgacgttgttc
ggccttgcggacgacactgaacccttctccccggaggagaagcccatcgttttccccctg
ccaaggagtattggaggtcacgccctaacggttgacgacaacgcactaactagctccgat
cagtacctggcgcatcacttaacccaaatggagccatcggatctaaattcatacagtccg
tacactaaccctgagcctggtttgaatgatttgggggagccggtgcagtctctccatttt
caggtggagtccaccatggccgttgaggacataggggagatggaaggcttaatgaagggg
gatgagccatctgtaaagcagtccaaagaggaaggggatgaggttataatcactgggagt
cattttgaaaggacaatcactgttgtcaagggcaactccagtctcggaatgacagtgagc
acaatcaaggatgccttggggatgtacatccgcagcatcatccacggaggttccatcaac
cgagacggccgtctgggagtgggggacctaatcctagtcatcaacggcgagtccatggcc
aacctgactaacacccaggcccgtgccatgctccggagacactccctcatcgggccagac
ttgggatctgcttgtgccccagaggaagatctgtgccctttttatgtcattacctatgtc
cctgtggagtatctggaggagtataagactagcctggagcagcctaaagatgacatctgc
tctgatgcacctctggcaccaataagaggaatcccagaacttcctgagcgggaggatgga
gagggagaggagagtgagttacagaccgccaccttcagtaactggaaccagcctatgaag
gtggagctcaaaagagaagcgggcaagtcccttggcatcagcattgtggggggcagaggg
atgggcagtcgccttagcaacggtgaggtgatgcggggcatcttcatcaaacacatcatg
gcggacagccccgccggccgcaatggtaccctgaagactggagataggattgttgaggtg
gacggtgtggacctgagtgatgccagtcacgagcaggctgtggaggccatccgcagggca
ggaaaccctgtagtgttcctggtccagagtatcgtccacaggcccaggcccaagtcccgc
tatagccccacttcatcaccagtcatagagtacagcaccgctttaaaacgcttgcctcat
cacatgtgccagtcctcaaccacggacaccaacgaggagagagtggcacggcgcaatagt
gacaagccgccaaagcgggaagcgggaaagacatcgtccaccactcctcacctctctctt
cctgtggttccccacgttggagagacagacacggatactctgacagagattcccgacaga
ccgtcccagacagaagaggaggataagtttggctacagatggaagaacatcagtcagagg
tacgacagcctcccagggcttctccacattattgagttggagaaggggaagactggcctg
ggccttagcctggctggcaaccgtgaccgctcccgtatgagcgtgtttgtggtcgggatc
gaccccagtggagccgccggcaaagacggtcgcgttgtggtcggggatgaactgttggag
atcaacgggcagattctgtatgggcggagtcaccagaatgcctcctccatcattaaaagt
gccccatcgaaggtcaagatcatattcatcaggaacacagatgctctcaaccagatggct
gtgggaccagtgagggagcatggagacacactggagccccagacagagctggaaacatgt
tcttccattgcaccctcggcgatcgatgtcgacatgttcaaatatgtgcagcacgtcatt
ctgctgaaggaggagggtggattcggcatcactttcagtgaggacaccaaggatgggctt
gtgattcagagtataactgaaaaaggaccagcaggaaaggacggcagcatcaaatctgga
gatcaactcctggctgtggaggataagccagtgatgggctacactgtggacagggtgcac
tctttactgaagaaggccaaaagctcagtgaaattgactatctgcacagacaagtcatcg
ccccttctccctcactgtactggtcaggcaaccagcctagccagcattcatagaatctcc
atggctaccctgggccagtctgagtcagagccaatcaggagctctagccgctcatctacc
cctggtactctggcttcctctgaccctgtgacctgtcccatcatccccggctgtgagacc
accatagacatctccaagggccgcacaggcctgggcctcagcatcgtggggggctgtgac
actctactggggaccatcatcattcacgaggtctatgaggacggagctgcctccaaggat
gggagactttgggctggggaccagatcctggaggtgaatggcattgacctgcgcgtcgcc
actcatgatgaagctatcaacgtgctgcgccagacccctcagcgggtgcgtctcagtgtt
tacagggacgaggctcagtacaaggaggaggacctgtgggatgccttcaccgtggagctg
aacaagaagcccggccagggcctgggcctcagtatcgtggggagaaggaacgacacaggg
gtgtttgtgtccgacatagtgaaagggggcgtggtggagagtgacgggaggctgatgcag
ggagaccagatcctgtccgtcaacaaggaggacgtcagaaatgccacccaggagttagtg
gccgagctgctgaagtgtggtgtgggacccatagtaatggaggtgggcagatttaaagcc
gggcccttccactctgagaggaggttctcacagaacagtcagatgagtgaaacaggcagc
tgcaaggtgacccctcactctctgtcagcctcctctggaagcctccaagtggactgtcac
agcttacaacacacacatcaggagtcaccggaccaccaggagatcagaagtgttgaattc
acgaagggcccaactgattccttgggcatcagtattgcgggtggagtgggcagtcccctg
ggtgatgtgcccatcttcatcgccatgataaaccctactagccttgttgtccagacacac
aaactcaagatcggtgacattatcgtcagtatctgtgggactgctactgagggtatgagc
cacagccaggccgtcaccctgctgaagaacgctaccggcaccgtcgggcttcaggtggta
gcagggagtgataccacagtgaccggcccctttcatgagcagaccgctaccggactctca
gtctcaggtcttactgctactagcatcttccacgatgacctgggacctcctcaatataag
accatcacactggacagaggcccagacggactgggcttcagcatcgttggtggcttcggg
agcccacacggagacctgcccatttatgtgaaaaccgtgttcggaaagggggcagcatca
gaggacgggcatctgaagcgaggggatcagattatggctgttaacgaacagagtctggag
ggggtcacccacgaggatgccgtgggcatcctgaagaggaccaaaggaacaatcaccctg
actgtgctttcctag
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integrated database retrieval system
