Oncorhynchus keta (chum salmon): 118392713
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Entry
118392713 CDS
T09424
Name
(RefSeq) netrin-1-like isoform X1
KO
K06843
netrin 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118392713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118392713
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118392713
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
118392713
NCBI-ProteinID:
XP_052315563
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All DBs
Position
13:complement(20690964..20709508)
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AA seq
870 aa
AA seq
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MGRLDDMRFLPVSPPPSFSLSFLLLVLTFLPPSLLSRSLSHSPLSWTSPHDPCYHLDGRP
RHCLSEFINAAYGVPVSAANSLRGPPDQNAVNISSVTDLHNPYNLTCWTAQVGGTDGGDW
VLTLPLGRRFEVTYISLQFCQQGEPSDPVSISLLKSMDHGRTWRPMQHYSSDCPGSFGLQ
AQTVAKTRHQETEPLCSDPRPLQRHRGGMVLAFSTLDGRPSSPDFDYSPTLQDWVTATDI
RVVFHQVTQPQQTKLGSSEDRGVGVGLGADTGVLRWRVGSKNKAVVGQVNGDNNAWGFVE
KEMKKTEKRGRSRGEKMDKSWRRGHNKGSGGQGEDGHNVTRKDLERDTQAMDTSKRGNGK
GKGRGRKREGGHHWSPCQEGGVCDWTIEGQGKDNKGRELRRRRNNNRNLQLVPPSPLIST
PPVRPPLALSDLQVGGRCKCNGHASRCRHDDADRVVCVCEHHTAGADCDVCEDFYYDRPW
QRATPSQPHPCVSCECNGHSSKCRFSMEVFQQSGRRSGGVCLKCRHHTAGRHCQYCQNGH
TRDHGKLPNHHKACQSCQCHPMGAVGRWCNQTSGQCLCRDGVTGLKCNRCALGYKQGRSP
LRPCIRVQEEASPTTPVYQPQYSVDEECVSYCQPSLVKLRMNLETYCLKDFVLKLQVRGM
ERSGPWWQFSVWIQTVFRTGSSSRVRRGPQALWVPDRDLGCGCPALQVGRTFLLIGAEGG
RRNWGPEERRLVADRSTLALQWREHWNPKLRGFRGQDKRGRCPPKLPGGGDPDGGHSKHH
HSEYTPPHLVTEKETEVKVHPHKHSHSHTPSDSVKDMEEEAENSVALDTNTHTQSSSHHR
PGPSQSQEEQQEQTPSTSTPSLVCSTQTPV
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggctcgatgacatgaggttcttgcccgtctcccctcccccctccttctccctc
tcttttctcctactagtcctcacttttctccctccttccctcctttcccgttcactctct
cactcccctctgagctggacttctccccatgacccctgctaccacctggatgggcgtccg
cgacactgcctgtcggaattcatcaatgccgcctatggtgtcccagtcagtgccgccaac
tccctccgaggacctcctgaccaaaatgctgttaacatcagctccgtcacggacctccac
aacccctacaacctgacctgctggacagcccaggtgggaggcaccgacggcggggactgg
gttctcaccctccccctgggccggcgctttgaggtcacttacatcagcctgcagttctgc
cagcagggggagccgtcggatccggtctccatctctttgctcaagtccatggatcacggg
cgcacctggaggcccatgcagcattactccagcgactgccccgggagttttgggctccag
gcccagactgtggccaagaccaggcaccaggagacagagcctctgtgctcggatccccgg
cccttgcagaggcaccggggaggcatggttctggccttctccaccctggatggaaggccc
tcctctccagactttgactacagccccaccctgcaggactgggtgacggccacggacata
cgggtggtcttccaccaagtgacccagccccagcagactaagttgggaagttcggaggat
aggggggtgggtgtgggattgggagcagatactggggttctgaggtggagggtggggtcg
aagaataaagctgtggttggtcaggtgaatggggacaacaatgcttgggggtttgtggag
aaggagatgaaaaagacagaaaaacgagggagaagcagaggagagaaaatggacaaatcc
tggcggaggggtcacaacaaagggtcgggaggtcagggagaggatggacacaatgtgacc
cggaaggatttagaacgagacactcaggcaatggacacctccaagagagggaacggtaaa
ggaaaagggcgtggccgcaaaagggaggggggccaccattggagtccgtgccaggaaggt
ggcgtctgtgattggacaattgaggggcaggggaaggacaacaaggggcgggaattgagg
aggaggagaaacaacaatcggaatctccagctagttcctccctccccattgatatccacc
ccccctgtccggccccccctggccctctccgacctgcaggtggggggcaggtgtaagtgt
aacgggcatgcctcacggtgtcgtcatgacgacgcggaccgggtggtgtgtgtgtgtgag
caccacacagcgggggcagactgcgacgtatgtgaggacttctactacgacaggccctgg
caacgagccacgcccagtcagccacacccgtgcgtctcgtgtgagtgtaacggccactcc
tcgaagtgtcggttcagcatggaggtgttccagcagtcgggccggcgcagcgggggggta
tgtctgaagtgtcggcatcacacagcgggacgccactgccagtactgccagaatggacac
acccgtgaccacggcaagctacccaaccaccacaaggcttgccaatcgtgtcagtgtcat
cctatgggtgctgtgggtcgctggtgtaaccagacatcaggacagtgtttgtgtcgggac
ggggtaacggggttgaagtgcaaccgctgcgcccttggctacaaacaggggcgctcgccc
ctccggccctgcatccgagtccaggaggaagcaagccccaccacacctgtgtaccaaccc
cagtacagtgtagatgaggagtgtgtatcgtattgccagccatccctggttaaattgagg
atgaacctggagacgtactgtctaaaggactttgtcctgaagctacaggtcagagggatg
gagcgttctggcccctggtggcagttctccgtctggatccagaccgtgttccgtacaggt
tcttcctcccgtgttcgcaggggcccccaggcgctgtgggttcccgaccgcgacctgggc
tgcggctgccccgccctccaggtgggccgcaccttcctgctgattggggccgaagggggg
aggcggaactggggccccgaggagcgacggctggtcgccgatagatccacactggctctc
cagtggagggagcactggaatcccaaactgagagggttcagggggcaggacaagaggggc
cgctgccccccaaaattgcccgggggtggggaccccgatgggggccactcgaagcaccat
cactcagagtacaccccacctcaccttgtgacagagaaagagacagaggtcaaggtgcac
ccacacaaacattcacattcacacacaccctcagactctgtgaaagacatggaagaggag
gcagagaactctgtggcgttggacacaaacactcatacacagtcctcgtcacaccacaga
cctggaccttcacaatcccaggaagagcaacaggaacagactccatccacctccacaccc
agtcttgtatgttcaacccagacccctgtctga
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