KEGG   Oncorhynchus keta (chum salmon): 118392713
Entry
118392713         CDS       T09424                                 
Name
(RefSeq) netrin-1-like isoform X1
  KO
K06843  netrin 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118392713
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:oke00536]
    118392713
Glycosaminoglycan binding proteins [BR:oke00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   118392713
SSDB
Motif
Pfam: Laminin_N NTR EGF_laminin EGF_LMN_ATRN
Other DBs
NCBI-GeneID: 118392713
NCBI-ProteinID: XP_052315563
LinkDB
Position
13:complement(20690964..20709508)
AA seq 870 aa
MGRLDDMRFLPVSPPPSFSLSFLLLVLTFLPPSLLSRSLSHSPLSWTSPHDPCYHLDGRP
RHCLSEFINAAYGVPVSAANSLRGPPDQNAVNISSVTDLHNPYNLTCWTAQVGGTDGGDW
VLTLPLGRRFEVTYISLQFCQQGEPSDPVSISLLKSMDHGRTWRPMQHYSSDCPGSFGLQ
AQTVAKTRHQETEPLCSDPRPLQRHRGGMVLAFSTLDGRPSSPDFDYSPTLQDWVTATDI
RVVFHQVTQPQQTKLGSSEDRGVGVGLGADTGVLRWRVGSKNKAVVGQVNGDNNAWGFVE
KEMKKTEKRGRSRGEKMDKSWRRGHNKGSGGQGEDGHNVTRKDLERDTQAMDTSKRGNGK
GKGRGRKREGGHHWSPCQEGGVCDWTIEGQGKDNKGRELRRRRNNNRNLQLVPPSPLIST
PPVRPPLALSDLQVGGRCKCNGHASRCRHDDADRVVCVCEHHTAGADCDVCEDFYYDRPW
QRATPSQPHPCVSCECNGHSSKCRFSMEVFQQSGRRSGGVCLKCRHHTAGRHCQYCQNGH
TRDHGKLPNHHKACQSCQCHPMGAVGRWCNQTSGQCLCRDGVTGLKCNRCALGYKQGRSP
LRPCIRVQEEASPTTPVYQPQYSVDEECVSYCQPSLVKLRMNLETYCLKDFVLKLQVRGM
ERSGPWWQFSVWIQTVFRTGSSSRVRRGPQALWVPDRDLGCGCPALQVGRTFLLIGAEGG
RRNWGPEERRLVADRSTLALQWREHWNPKLRGFRGQDKRGRCPPKLPGGGDPDGGHSKHH
HSEYTPPHLVTEKETEVKVHPHKHSHSHTPSDSVKDMEEEAENSVALDTNTHTQSSSHHR
PGPSQSQEEQQEQTPSTSTPSLVCSTQTPV
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgggtaggctcgatgacatgaggttcttgcccgtctcccctcccccctccttctccctc
tcttttctcctactagtcctcacttttctccctccttccctcctttcccgttcactctct
cactcccctctgagctggacttctccccatgacccctgctaccacctggatgggcgtccg
cgacactgcctgtcggaattcatcaatgccgcctatggtgtcccagtcagtgccgccaac
tccctccgaggacctcctgaccaaaatgctgttaacatcagctccgtcacggacctccac
aacccctacaacctgacctgctggacagcccaggtgggaggcaccgacggcggggactgg
gttctcaccctccccctgggccggcgctttgaggtcacttacatcagcctgcagttctgc
cagcagggggagccgtcggatccggtctccatctctttgctcaagtccatggatcacggg
cgcacctggaggcccatgcagcattactccagcgactgccccgggagttttgggctccag
gcccagactgtggccaagaccaggcaccaggagacagagcctctgtgctcggatccccgg
cccttgcagaggcaccggggaggcatggttctggccttctccaccctggatggaaggccc
tcctctccagactttgactacagccccaccctgcaggactgggtgacggccacggacata
cgggtggtcttccaccaagtgacccagccccagcagactaagttgggaagttcggaggat
aggggggtgggtgtgggattgggagcagatactggggttctgaggtggagggtggggtcg
aagaataaagctgtggttggtcaggtgaatggggacaacaatgcttgggggtttgtggag
aaggagatgaaaaagacagaaaaacgagggagaagcagaggagagaaaatggacaaatcc
tggcggaggggtcacaacaaagggtcgggaggtcagggagaggatggacacaatgtgacc
cggaaggatttagaacgagacactcaggcaatggacacctccaagagagggaacggtaaa
ggaaaagggcgtggccgcaaaagggaggggggccaccattggagtccgtgccaggaaggt
ggcgtctgtgattggacaattgaggggcaggggaaggacaacaaggggcgggaattgagg
aggaggagaaacaacaatcggaatctccagctagttcctccctccccattgatatccacc
ccccctgtccggccccccctggccctctccgacctgcaggtggggggcaggtgtaagtgt
aacgggcatgcctcacggtgtcgtcatgacgacgcggaccgggtggtgtgtgtgtgtgag
caccacacagcgggggcagactgcgacgtatgtgaggacttctactacgacaggccctgg
caacgagccacgcccagtcagccacacccgtgcgtctcgtgtgagtgtaacggccactcc
tcgaagtgtcggttcagcatggaggtgttccagcagtcgggccggcgcagcgggggggta
tgtctgaagtgtcggcatcacacagcgggacgccactgccagtactgccagaatggacac
acccgtgaccacggcaagctacccaaccaccacaaggcttgccaatcgtgtcagtgtcat
cctatgggtgctgtgggtcgctggtgtaaccagacatcaggacagtgtttgtgtcgggac
ggggtaacggggttgaagtgcaaccgctgcgcccttggctacaaacaggggcgctcgccc
ctccggccctgcatccgagtccaggaggaagcaagccccaccacacctgtgtaccaaccc
cagtacagtgtagatgaggagtgtgtatcgtattgccagccatccctggttaaattgagg
atgaacctggagacgtactgtctaaaggactttgtcctgaagctacaggtcagagggatg
gagcgttctggcccctggtggcagttctccgtctggatccagaccgtgttccgtacaggt
tcttcctcccgtgttcgcaggggcccccaggcgctgtgggttcccgaccgcgacctgggc
tgcggctgccccgccctccaggtgggccgcaccttcctgctgattggggccgaagggggg
aggcggaactggggccccgaggagcgacggctggtcgccgatagatccacactggctctc
cagtggagggagcactggaatcccaaactgagagggttcagggggcaggacaagaggggc
cgctgccccccaaaattgcccgggggtggggaccccgatgggggccactcgaagcaccat
cactcagagtacaccccacctcaccttgtgacagagaaagagacagaggtcaaggtgcac
ccacacaaacattcacattcacacacaccctcagactctgtgaaagacatggaagaggag
gcagagaactctgtggcgttggacacaaacactcatacacagtcctcgtcacaccacaga
cctggaccttcacaatcccaggaagagcaacaggaacagactccatccacctccacaccc
agtcttgtatgttcaacccagacccctgtctga

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