Oncorhynchus keta (chum salmon): 118392717
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Entry
118392717 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118392717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118392717
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118392717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118392717
NCBI-ProteinID:
XP_035640683
LinkDB
All DBs
Position
1:complement(72053439..72088979)
Genome browser
AA seq
2369 aa
AA seq
DB search
MATVLLQALERAEIAKLPKAVQNKLEKLLSDLQYEIDSLKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVTQTEQHHKLREEFTKIDEELKSVLEKNKEYEINQEKLTSEQAQLCKAKNEL
EAEKRELVRTLERRSQEVAYLSEDLQRLNDKVAEVNASKMGLQLKLDELESSEVNIKYRE
KRMEQEKELLRGQTAWLNAELKAKSEELLALSRQKGNQILELKCSLENKEDELNRVQDQV
TSLKTSNEGLHKQAEDIINKLKEDKEQQASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAGEANKALEARLQQMDDCRDNEAAALKERIINLEKELENANELL
SDTKLRGSAGAASVLSEETITTMSPTAVAVAKIVKPGMKLTELYTAYVETQEALQLERVE
NKRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSSKLEQAVKEVHRLQKVTDEA
NKRSSVLERDNQRSDVQLADMGQQIRVLLIELEEARGNHVAHDEEVSSADISSTSEVITQ
HLVTFRGVEELQQQNQRLLVALRELSEAQEREEEETTGTKCSELERSLEKAQAELEALRE
QRSHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAAAEDFSSTPRRSPAATPTTPTGI
ITMATESTEVVEAKAALRQLQEVFSSYKRERSESDKTLMEQSEKLQKQMSDQRFHNAKIS
TQLEFTSKRYEMLQDNVKGYRKEIASLMEKGQKMAAAAQKCEQTVHTMTQDLRVVQEKLN
MAEGRAESLRKEREMLKLVESRLTQEKETMQTQQRGQNMLLTNLKTIEATLERSETDTRQ
RLNAQIEKQEREIGQLQKRLEHEVEQRHLLSRNQDLQLMDAKRQLEAQTALLQKTRDQLS
AAQLEVSSLRLQQGSGEGGRLSLSSPPTPMGIRGFQVSEGDSEDLHGRLKQAETRAEELT
EQLRTATSSMELYRAMAQSLEESLDKEMQVTEQARSAIEERVKEAQEQHRQLEKKLLEAE
KEKQGLQEEKMKALASVEQQVAVLRRSLSSVQADHQEALQMAAVAAAQEQQAMLDSQEQA
KLASEAQDKYEREMMLHAADVESLQAAKAQALQAATLRQQLEERAQRASAQLLEARVSWE
EQERIFKEEMSKVVSRSEELQRQNSLLHEQIQTMSCKMAATLQRQANESPLNISLTEEGK
SQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESLSAERERMQV
TAKTLAKHDELMKKTETMSVLMETNKMLREEKERMEQELQQTQAKVRKLESDIMPMQESN
AELSEKSGMLQAEKRILEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQL
TEETGRLKAEVARSGGSVTSLQSQVQMLREGLGKVSSDRDARRRSMEAMNLDIQEKFRTI
TQVKKIGRRYKTQYEELKVEHDKMVFEAASTPAQEQEAQQASAQELQGLKDSLGQAETRT
KDLEGQLDNLNKVVGEREAEVRGSQEQASRLQTELTRLRQELQEKASQEDTLRQQMAEKE
EKTRKAFVGAKQRINQLMGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLREQQERHGEQRDEPLEQGPSKAQEQQRTTEQRGPLKTTQAADRGSTSTSEPPTANIK
PTPLGAQGPSKPPAIPGNKPXPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSSE
GPPEHVTVYGSASGSVRSTSPNVQTTNPMLVVQQTQTQTTAFVQPTQQQSLPHTEPANQE
QPPAPVMEAAPSSQMERPSTSTAVFGTVSATPGTSSMSKRPREDEQDSSMVADTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAEGSAEGLVPGEAQEAPETSQQVVEEYPVLEE
AEEGAASQSVPVELLLSETAFISFSYDANEEPPQHDVIVIVTDSESEDEQQEEVEEDEEE
EPDYDEEEEEEEDDEEEEEDEDDGGMGDEGEESNEGSRDGNEAYEGDDTEGPDGTDPGTE
TEESLGASDSTQRPADSQTHSFEGSSSMEAFSSDPTSSAPRMHQSPRRAPHPLPPRLNIT
QERGPPAQVQRPMRRQSVGRVPQLTPGMASGGQHFFDDDDRMVPSTPTLVPPHRSDSFAE
AIHSPQVAGVPRFRFGTPEDLMPQTTTSHSDLGHLASQGGLGMYDSPLFLPGHEDESGGL
SVPTTPLQVAAPVSIFAEVTPSDGTEHTSQSVSMVTTSTPGLVVAEGPSPGDERDDVFMA
PGGDLVEVSLEPVMSRAGEIEEPTQVSDDCGLPSTSQELSSSSADTSRTQPKPSRPGHSR
QLQRWTENRMRRGTLPSRGVTGTGRRFAR
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgctacttcaagcgttggagcgcgctgagatagcgaagctaccaaaagct
gttcaaaataaactagaaaagttactttctgatctgcaatatgaaatagattccctcaag
tcacaccaggagcaatttagagtcgatagcgaacaacagttctttgagaaagtgcaacgt
cttgaacagagtcaggaacagtttgtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcgatgaagaactcaagagtgtactagaaaagaataaagagtatgaa
atcaaccaagagaagttgacatctgaacaggcccagctctgtaaagccaaaaatgaactg
gaggcagagaagcgggagcttgtgcgtacattggagaggagatcccaggaagtggcctat
ctgagtgaggacctgcagcgcctcaatgacaaagtggcggaagtcaatgcctcaaagatg
gggctgcagctcaagttggatgagcttgaatcctcagaggtcaacatcaagtaccgtgag
aagcgtatggagcaggaaaaggagctgttgcgaggccagactgcctggctgaacgcagag
ctcaaggctaaaagtgaggagctgctggctctttcacgccagaagggcaaccagatcctg
gagctgaagtgcagcttggagaacaaagaggatgagttgaacagagtccaggaccaagtg
accagtttgaagacttcaaatgaaggccttcataagcaggctgaagacataatcaacaaa
ctgaaagaggataaggagcagcaggctagcatggaggagaagtttagaaacgagctgaat
gccaacataaagctctccaacctgtacaagggagctgctgcagactctgagtccaagagt
gaggaattgagtggggctgtagaggagctgcacaagctgctgaaagatgctggagaggcg
aacaaggccctagaggcgaggttgcagcagatggatgactgtcgggacaatgaggctgct
gcgctgaaggagaggatcatcaatttggaaaaagaactggagaacgccaacgaactgctg
tccgacaccaagctcagaggctctgctggtgcagcctcagtgctgtcagaggaaacgatt
accaccatgtccccgaccgcagtcgccgttgccaagatagtcaaacctggcatgaagctg
actgagttgtacacagcgtatgtggagacccaggaggcactgcaactggagcgtgtggag
aacaagcgggtgaataagtacttggatgacatagtgcaggaggtggaggctaagggtccc
atcctcaaacgccagagggatgagcatgagcgtatgcagaaatctgtggccagcctttca
tccaagctggaacaggcagttaaggaggttcaccgtctgcagaaggtgactgacgaggcc
aacaagcgctcttctgtcctggagagagacaaccagaggtccgatgtgcagcttgcagac
atggggcagcagatccgtgtcctactcattgagctggaggaggcgcgtggtaaccatgta
gcccacgacgaggaggtgagctctgctgacatcagcagcacgtcagaggtcatcacgcag
cacctggtgacgtttcgtggggtggaggagctccagcagcagaaccagcgcctcctggtg
gccctccgagagctcagcgaggcacaggagagggaggaggaagagaccactggcaccaag
tgcagtgagctggagcgcagtctggagaaggcccaggcagagctggaggctctgcgagag
cagcggagccaccagatgcagctggctgagtccatcgttaggcagagagatatgtacaga
gtgctgctggcccaggccaccggagtcagcttccctcagcaaggtgcagcagctgctgag
gacttctctagcaccccccgccgctcccctgccgccacccccaccacacccactggaatc
attactatggcaaccgagtcaaccgaggtggtagaggccaaggcagccctccgacagttg
caggaagtgttctcttcctataagagggagaggtctgagagtgacaagaccctgatggag
cagagtgagaagctacagaagcagatgtctgaccagagattccacaatgccaagatatcc
acccaactggagtttacttccaagaggtatgagatgcttcaggataatgttaagggctac
aggaaggagattgcctctctgatggagaagggacagaagatggctgctgcagcccagaag
tgtgagcagactgttcacaccatgacccaggacctgagggttgtccaggagaaactaaac
atggcagagggtcgtgctgagagcctcaggaaggagagagagatgctgaagctagtggag
tccagactgacccaggagaaggagaccatgcagacccaacaacgaggacagaacatgctg
ctcaccaatctcaagaccatagaggccacgttggagcgctccgagacagacaccaggcag
cgtctgaacgcccagatagagaagcaggagagggagatcggccagctgcagaagagactg
gaacacgaggtggagcaacgccacctgctgagcagaaaccaagatttgcagctgatggat
gccaagaggcagctggaggcccagacggccctgctccagaagaccagggatcagctgagt
gctgcccagctggaggtgagctctctcaggctgcagcagggcagtggagagggtggtcgt
ctgtccctgagctccccgcccactcccatgggcatcagaggtttccaggtttcagaaggg
gactctgaggatctgcatggccgcctgaagcaggcagaaacacgggcagaggagctgaca
gagcagctgaggacagccacctccagcatggagctgtacagagccatggcccagagccta
gaggagtccctggacaaggagatgcaggtgacagagcaggctcggtctgccattgaggag
cgtgtgaaggaagcccaggagcagcaccgtcagttggagaaaaagctcctggaggcagag
aaggagaagcagggcctgcaggaggagaagatgaaagccctggcctccgtggagcagcag
gtggctgtgctgaggaggagtctgagcagtgtgcaggcggaccaccaggaggctctacag
atggcggcggtggcagcagcccaggaacagcaggccatgctggacagccaggagcaggcc
aagctggcatcagaggcacaagataagtatgagcgtgagatgatgctccacgctgcagac
gtggagtccctccaggcagccaaggcccaggccctgcaggcagccacgctcagacagcag
ctggaggagagggcccagagagcctctgctcagctgctggaggccagagtctcctgggag
gaacaggagaggatcttcaaggaggagatgtctaaggtggtgtctcgttctgaagagctg
cagaggcagaacagcctcctccatgaacagattcagaccatgagctgcaagatggccgcc
accctgcagcgccaggccaacgagagccctctgaacatctccctcacggaggaaggcaag
tctcaggaccaggtccttgagatactcaggtttgtgcgccgagagaaggagatagcggag
tctcgattcgaggtggcccaaggagagagtcttcgccataggctgagagtagagcacctg
gagagagagctgagagaactacaggagagccttagtgctgagagagagcgaatgcaggtg
acagctaagaccctggctaagcatgatgagctgatgaagaagactgagaccatgagtgtc
ctgatggagaccaacaagatgctgagggaggagaaggagaggatggagcaggaactccag
cagacacaggctaaagtgcgtaagctggagtcggacataatgcccatgcaggagtccaac
gctgaactgagtgagaagagcggcatgctgcaagcagagaagaggattctggaagaggac
atcaaacgctggaaggccagaacacagcacctggtgagccagcagaaggacacagaccca
gaggagtacaagcgtctccactctgagaaggaggctcacctcaaacgcatccagcagctc
actgaggagacgggcagactcaaggctgaggtggccaggagtggtggctcggtgacgtcc
ctccagagccaggtgcagatgctgcgtgagggtctggggaaggtgagctctgacagggat
gcacggaggaggagtatggaggccatgaacctggacatccaggagaagttccgcaccatc
actcaggtcaagaagatcggacgccgctacaagacacagtatgaggagctcaaggtggag
cacgacaagatggtgtttgaggcagcgtccaccccagcccaggagcaggaggcccagcag
gcctcagcccaggagctccagggtctgaaggactccctgggacaggctgagacccggacc
aaagacctggagggacagctggacaacctcaacaaggtggtgggtgagcgtgaggcggag
gtgcgcgggtcgcaggagcaggcctccaggctgcagacagagctgaccaggctgagacaa
gagctgcaggagaaggcctcccaggaggacaccctcagacagcagatggctgagaaggag
gagaagaccaggaaggcctttgtcggggccaagcagaggatcaaccagcttatgggctcc
aaggaccagctgcagaaggaaaatgaggagctgaaacagcagagggaggagctggaggtc
agagtcagtgctctgaagtcccaatacgagggccgtctgagccgccaggagagggagctg
cgtgacctgagggaacagcaggagagacacggagagcagagggatgagcctcttgaacag
ggtcccagcaaggctcaggaacagcagaggaccacagagcagcgaggaccactgaagacc
acccaagctgcagaccggggcagcaccagtacctctgagccccctactgccaacatcaag
cctacccctctgggtgctcaaggccccagcaagccccctgccatccccgggaataaaccc
nacccccgggcaagcatcaggcccatgatcacccctgccaccgtgcccacccccacccct
actgccactgtcatgccaaccacacaggtggagaaccaggaagccatgcagtcatccgag
ggcccgcctgagcatgtgactgtttacggcagtgccagcggttcagtacggtcaaccagc
cccaacgttcagaccaccaacccaatgctggtggtccagcagacccagacccagaccaca
gccttcgtccagccaacacagcaacagagcctgccccacactgaaccagccaatcaggag
cagcccccggccccagtaatggaagcggcacccagttcgcaaatggagaggccgtcgacg
tcaacagccgtgtttgggacagtttcagccaccccaggaacatcttccatgtccaagaga
cctcgtgaggacgagcaggacagctctatggtggctgacacagacaccccccaggaggac
ccctctgaaccccccatccccaagaagctacgcatcatccagagagtcgacccagaggag
ccagaggcccaagaggaggtgctggctgagggcagtgcagagggactggtgcctggagag
gcccaggaagccccagagacgagccagcaggtggtggaggagtacccagtactagaggag
gctgaagagggtgcagcgtctcagtctgtccccgtagagctgctcctgtccgagaccgca
ttcatctcattttcatacgacgccaacgaagaacccccccagcacgatgtcatcgtcata
gtgaccgactctgaaagcgaggacgagcagcaggaggaggtggaggaggatgaggaagag
gaaccggactatgatgaggaggaggaggaggaggaggatgacgaggaggaggaggaggat
gaagatgatggagggatgggggatgagggggaggagagcaatgaagggagcagagatggc
aatgaggcatatgaaggcgacgacacagagggtcctgatgggacagacccaggcacggag
acggaggagagtctaggagcatctgactccacccagcgcccggctgactcccagacacac
agcttcgagggcagcagcagtatggaagccttctcaagtgacccaaccagctctgctccc
agaatgcaccagtctccacggagagcaccccatccgctgcccccccgcctcaacatcacc
caggaacggggaccccctgctcaggtacagcgccccatgcgtcgccagtcggtaggcaga
gtccctcagctcacccctgggatggccagcggcggacagcacttttttgacgatgatgac
aggatggttcccagtactcctactctggtgccgccacaccgctctgacagctttgcagaa
gctatccattctccccaggtggctggtgtaccccggttcaggttcggcaccccagaggac
ctgatgccccagaccaccacctcccactctgacctgggacatctggcatcacaaggaggt
cttgggatgtatgatagtcctttgttcctgcctggtcatgaggatgagtctgggggcctc
agtgttcccaccacacccctgcaggtggctgccccagtgtccatatttgcagaggtcacg
ccatctgacggcacggaacacacctctcagtctgtttccatggtaaccacctcaacccca
ggcttggtggtggccgaaggacctagtcctggggacgagagggatgatgtcttcatggcg
ccggggggagaccttgtggaggtgtctctggaacctgtaatgtctcgggcgggggagata
gaggaacctacccaggtctcagatgactgcggcctgccttctaccagccaggaactctcc
tccagctctgcagacactagtaggactcagcccaaaccctctagaccaggacacagccga
cagctccaacgctggacagagaaccgcatgaggagagggacgctgccatcacggggtgta
actgggactgggaggagatttgcccgataa
DBGET
integrated database retrieval system
