KEGG   Oncorhynchus keta (chum salmon): 118392773
Entry
118392773         CDS       T09424                                 
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118392773
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118392773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oke03016]
    118392773
Transfer RNA biogenesis [BR:oke03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    118392773
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 118392773
NCBI-ProteinID: XP_052316050
LinkDB
Position
13:38020845..38041460
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEMADQLLQLKQDVESCYF
AAQTMKMKIQTSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVKSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPSN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSQTLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgtgcaggctctttatcatgatccg
gaccccgccggtaaagagcgagcttcggtgtggctgggggagctacagagatcgatgtac
gcgtgggagatggcagaccagctcctccagctgaaacaggacgtggagtcttgttacttt
gccgcccagaccatgaagatgaagatccagacgtcgttctttgagctccccccagagacc
cacatcgccctccgagactccctgctctcacacatacagagcctcaaagacctctccccc
atcatcgtcactcagcttgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgatgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacatgtgtggagaagtctggcagcaatgagaagatgctgatcaaggtgttc
cgctgtctgggaagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctgatggtccttttccaagtgctgcaaagagacgagacatccactaacctgcac
gaggctgcgtccgactgtgtgtgttctgcactgtacgccatcgagaacgtggacacacac
atgcccctggccctgcagctttttcagggcgtcctcacgctggagacggcctaccatatg
gctgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagaccacagtcaagagtccaggccagggcatgggagacctgcga
acgcttgagctgctgctcatctgtgcaggacacccccaatatgaggttgtggagatttcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccatgagggcatcccagaagatacagatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaaggcaaccctccctgggaggtgaccgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagtgaggtcgttgaccgcaacccgcggttcctagaccctgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcg
atccataacatctgctctgtgtgccgggaccacatggcccagcacttccagggcctgctg
gacatcgcccgtgcccttgactcctttgccctgaccaccgaagccgccgtaggcctcctc
aaaggtacagccctggtcctggctcgtctgcccctggagaagattgctgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccagcaat
gggaaagccgctgaccccactgtctggctggacagactagcagtaatcttcagacacaca
aacccaattgtagagaatggacaaacacacccatgtcagaaagtcatccaggagatctgg
ccggtcctgtcacagactctaaacacacaccaggctgataaccgcattgtggaacgctgc
tgtcgctgcctgcggttcgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactcgtcacacagatggtcagtgtgtatcaggtgtatccccactcctgcttcctttat
ctgggcagcatcctggtggatgagtacggcatggaggaaggctgcagacaaggtctacta
gacatgctacaggctctgtgtatgcccaccttccagcttttggagcagcccaacggtctc
cgtaaccacccagacacagtagatgacctcttcagactcgccaccaggtttgtccagcgt
agtcccgtcaccctgctcagcagtggcatcattgtccacatcatccagtgtgctatcgcg
gccaccacactggaccaccgggacgccaactgcagtgtcatgaagttcgtcagagacctc
atccacacgggcgtcagcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgatgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaacgcgctgaaggggcttcctaaggag
acgtcaggcggggcggtgaccgtcacacacaaacagctcacagacttccacaagcaggtc
accagtgcggaggagtgtaagcaggtgtgctgggctatccgggagttcaccagattgttc
cgatag

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