KEGG   Oncorhynchus keta (chum salmon): 118392777
Entry
118392777         CDS       T09424                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04510  Focal adhesion
oke04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118392777
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118392777
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C OVT1
Other DBs
NCBI-GeneID: 118392777
NCBI-ProteinID: XP_052316066
LinkDB
Position
13:38457763..38484407
AA seq 1781 aa
MLILHIASLLSLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGEKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTSRNCDRCLPQHWGLSNDMDGCRPCDCDQGGALNNDCSPISGQCQCREHMYGRRCDQV
ESGYYFIALDHYTYEAEEAKHGPGVTVVPRPYPLNRSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPDQWEQVEIRVIRPYSMRVGQPASPCENTLQGGDQQLVSLLPG
SRHVLLLRPVCLEKGRNYTVRLGLPLYSSLSDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCRCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPTGSVNAFCHEATGQCECVPGAS
GRQCVHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTADNYQLVCACSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDAHTGVCLKCLHHTEGYGCQRCKLGYYGNATSQSCRR
CMCYSVGTMSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCALDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCRSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGTFPACERCHQCFAEWDRVVGELSNQTQRLKDHVTE
LQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKMEDVQQMMQQATELVADLNERLNV
SEDSLSRLVVNANDTEASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKRAEIRANQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLESLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLFTQTQSTLKTAK
DFDQEILSTLQEVDKLSRMVWEGKVRADEAKLNAQEVLLKSNQSRDRVEQSNEQLRSLIK
EIRGLLTNDRAKVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGALTSVEDILSQSA
NDIHTAERLLEQARTASQEVSEMKETAALVKEALETTERAQNAAIDAVKQAHNNTRGTLD
LITSVESETAESELCLSNATLRLLQLERDVTLLRESSLGTSHHTQHTESLSETARQDAEQ
ALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQSSVKLQRFRELER
SYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgctgatattgcacatcgcatcacttttgtccctcgggtggcgctcctttgcccagctg
ccagagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcacaaactcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccccaaccgcctcaagacctggtggcagtcagagaatggggtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacttttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttggggagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccggcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagatgaggtcacagagaaatactactatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gttgatgggatacacgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
acgggctccctgcagggtggtgtgtgtgacggcaggacagacgtgtccgctggtctgata
gcaggacagtgtcgctgtaagaccagtgttgagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccagcaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccctcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggatactacttcatcgccttggaccactacacctacgaggctgaggaagccaag
cacggccctggtgtgacggttgttcccaggccctatcctctgaaccgtagtcctacctgg
acaggggctgggtttgtcaaggtacctgagggagcccacctggagttccacatcaacaac
ttacctgactccatggactacgacatgctgattcgctacgagccacagttgccggatcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcagccagcc
agtccatgtgaaaacacgcttcaaggaggagatcagcagttggtgtctcttcttccagga
tccagacatgtgctgctcctgaggcctgtgtgtctggagaaggggcggaactacactgtg
cgtctcggcctgcctctttactcctctctcagtgacgtccaaagcccctacacgctcatc
gactccttggtgttgattccgcgggtgcgtgagctgctgttgtttgagggttctcagggt
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccaaagcgtcatc
aagagccccatgacggacatctgcaacaactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctcttagtgcagtgtgcgacccc
agcggcgggcagtgccggtgtcggcccaatgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccattaggatgcagacgctgtgagtgtagtcctacgggc
tctgtgaacgctttctgccacgaggctacaggtcagtgtgagtgtgttccaggggcgtca
gggcgtcagtgtgtccactgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaacggcaacagcgactactgccaccctcagaccggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgaccccgtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcgggcgc
cagtacgcagacagctgctaccagaccgccgacaactaccagctggtctgtgcctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcacacaggtgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaacgccaccagccagagctgcaggagg
tgtatgtgttattcagtgggcacaatgtcggaggcgtgtccgtctccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaatgttattggccagaactgcgac
cgctgtgcccttgatacgttcaacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcagggcagtgctcgtgcagg
tcaggtttcgggggtcgaaaatgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccagtgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgagtgg
gaccgcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacggcgccgtacaaagacaccgttagcagtctggagattagt
gctaatgctatcagtgcgatagtagagaacaaccccgctatacagaagatggaagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tctgaggattccctgtcccgtctcgttgtcaatgccaatgacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagtcacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gagtctaagagggcggagatccgtgccaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacactacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagagtctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcagctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcacccttcgctgt
ggtggggaggggtgtgacggtttattcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctctccaccctgcaggaagtggacaagctctctaggatggtg
tgggagggcaaggtgcgtgcggacgaggccaagctgaatgctcaagaggtgctgctgaag
tccaaccagagtcgagatagagtggaacagagcaacgagcagctccgcagcctcatcaag
gagatacgaggcctactcactaacgaccgtgccaaagtggaggttattgaagcggtttca
aatgaggtgttggccctggagatgcccacatcgcccgagcagctggaggccctgaccaag
gagatcagagacagggtgggagccctcaccagcgtggaggacatcctcagtcagagtgcc
aatgacatacacactgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggtgaaggaagctctggaaacgactgagcgtgct
cagaatgctgccatcgatgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcatcacatctgtggagtcggagacggcggagtcggagctgtgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctgggcacc
agccaccacacacagcacactgagagtctgtctgagaccgctaggcaggacgcagagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttggta
gtgacgaaggcagagggcgtgtctgatgccaggaagagggcggagctactgcagcaggag
gccaaggagttgctcacccagtccagtgtaaaactacagagattcagagagttggagagg
tcgtatgcggccaaccagcgtactctggaggccaagacagttcagctggccgggctggag
aaaacggcacgccagctgctcaatgacatcagccagaaagtaatggtctacagcacctgt
tcttag

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