Oncorhynchus keta (chum salmon): 118392782
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Entry
118392782 CDS
T09424
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118392782
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118392782
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118392782
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118392782
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118392782
Proteoglycans [BR:
oke00535
]
Cell surface proteoglycans
Others
118392782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTP-NADK
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
118392782
NCBI-ProteinID:
XP_052316110
LinkDB
All DBs
Position
13:40411037..40457451
Genome browser
AA seq
1438 aa
AA seq
DB search
MELTVSRVLIPIAQLLVSCHIVALTEAYFKAQRKFTDDIDWSYTGQLNQKIWGKRYPACN
NARQSPIDIDETFTQVRVEYQGLQLEGWEKNTPETTTINNDGNTVVLGLDGEYYVSGGGL
STRFRLGRMTFHWGRCNASSDGSEHSLNGLKFPLEMQILCYESGLYQSIDDAVRDGGRIA
ALAVLFETSLDNNDNYNTILEGVNSVNRFGKTGNVEPFSLLALLPNSTDKYYTYNGSLTS
PPCSETVEWIVFKHTVPISETQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQQFLGQVF
SSYTGTEEVLTPMCSSEPQNMQADAQNETTIMVMWERPRVVYDTTIDWYSVTYQRLQDQN
QPKHEYRTDGDQDVGAIIPGLLSNSSYVVQVVAVCTNGLTGRWSDQIIVDMPQEDPEIES
DPDNTEPEDILEPEDILEPVDQVPVDQNPVEESSTREGRQQIFPDQPSTTAASQVSSVPV
PPGTRDDQNRIDQDPVNQSRVDKPKKDQTRKDKKKQRIPPHRPFTSAASNGKSAMWVTMV
TDQPGFLIPVSRTNSPPPVRRPITEEASLSRSPQQNRNQNRGSAAQKPDVSGIGLIPPEG
DMYTPPAGGMVVTDVYYEDVVNTTALESATTPTKTTLKKPLDDRVLSPVTARPKVTMKGH
DRGLVLTSRLSDNRVSTVTRATPIQQTPVSVTSTTSVPWIRSRTSSPSNSLSTAYGSSTT
SGLVKVLQHTTQPIFTEINNSSHESRVEMVGSVAERERRTVVPLAVVSTLTIICLLVLVG
ILIYWRNCFQTVDFYTEDTASPKVISALSSPLLLTTEEHEALSVKQFVKHVAELHQTNTF
SKEFEIVTECYEEVQSCTVEMGITTDSSNHPDNKNKNRYINIMAYDHSRVKLLEEGKGGD
YINANFVDGFERTRAYIAAQGPLKSGTEDFWRMVWQENVGVIVMITNLLEKGRRKCDQYW
PMENQEEYGNFLVTLKDTKTLAYYTLRTFTLRDTSQKASQRGRCAERTVVQYHYTQWPDM
GVPEYTLPVLSFVRASTQARTQDMGPVLVHCSAGVGRTGTYIVLDSMLQQIQDQGTVNIL
GFLKHVRTQRNYLVQTEEQYVFIHDALVEAIISRDTLVTSDLVHSYVSDLLTTGPSGRTR
MERQFKLVSQRRARQADYAAALREGNDDKNRTSSLMPVERSRVCLSCPVEGESSDYINAS
YIMGYHKSREFILTQSPLPSTVSDFWRMVWDHNAQLIISLPDTHTAQRGGEESCAYWPSK
DQPISCEGFIVSFSGEDHMCLANEERLVVHDFLLEATQDNYVLEVRQYMSPCWPNPDSPV
SGTFQLLNIITEDSRQREGTIVVHDRLGGSVAGLFCALTTLAHQLEQQGSVDVYEVARMT
NLMRPGVFNDMEQYQFMYRAVLSLVDSQEDQRALQSPETNGSVLLGATTAAESLESLM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgtatccagggtgctgattcccattgcgcagctcctggtttcctgccat
atagtggccttgacagaggcgtacttcaaggcccagaggaaattcacagacgacatcgac
tggtcctacacaggccagctgaaccagaagatctggggtaagaggtacccggcgtgcaac
aatgcccgtcagtcacccatcgacatcgacgagacgttcacccaggtccgggtggagtac
cagggcctgcagctggagggctgggagaagaacaccccagagaccaccaccataaacaac
gacggcaacacagtggtgctaggcctggacggggagtactatgtgagtggcggtggtctg
agcaccaggttcaggttggggaggatgacgttccactggggccgctgcaacgcctcctca
gacggatcagagcacagcctcaacggactcaagttccccctggagatgcagatcttgtgt
tatgagtcaggcctgtaccagtctatagacgatgcggtgagggatggagggaggatcgca
gcgctggcagtcctgtttgagaccagcctagataacaatgacaactacaacaccatctta
gaaggggtcaacagcgtcaacaggttcggtaagactgggaatgttgagcccttctctctg
ctggccctgctccctaactccactgataaatactacacgtacaacggttccctcacctcc
ccaccctgctctgagacggtggagtggatcgtcttcaaacacaccgtgcccatctctgag
acacagttggaggtgttctgtgaggtgatgaccatgcagcaggcaggctatgtgatgctg
atggactacctgcagaacaacttcagggagcagcagcagcagttcttgggccaggtcttc
tcctcctacactggaacagaggaggtcctcactcccatgtgcagctcggagcctcagaac
atgcaggcggatgcccagaacgaaactaccatcatggtgatgtgggagcgcccccgtgtg
gtgtatgacaccaccatcgactggtactctgtcacctaccagcggctgcaggaccagaac
cagcccaaacacgagtaccgcaccgacggagaccaggacgtgggggccatcatccccggc
ctcctgtccaacagcagctatgtggtccaggtggtagctgtctgcaccaatggcctgacg
ggacgctggagtgaccagattatagtggacatgccccaggaggacccggaaattgagtct
gatccagacaacacagaacctgaggatatattggaacctgaggacatattggaaccagta
gaccaggtcccagtagaccagaacccagtagaagagagcagcaccagagagggtcgccag
cagattttccctgaccagccctccaccactgctgcctcccaggtgagctctgtgccggta
ccaccaggcaccagagatgaccagaaccggatcgaccaggaccctgtgaaccagtccaga
gtggacaaacccaagaaggaccagaccaggaaggacaagaagaagcagcgtatccctccc
caccgccccttcaccagcgccgcctccaacggtaagagcgccatgtgggtcaccatggtg
accgaccagccggggttcctgattcccgtctcccggacgaacagcccgccgcctgtccgc
cggccaatcacagaggaggcctcattgtcgcggtctcctcagcagaaccggaaccaaaac
cgtggttccgctgcccagaaacctgacgtttccggtatcggcctgatacccccagagggc
gatatgtacacccctccggcagggggcatggtggtcactgatgtttactacgaggacgtt
gtcaacaccactgccttagaatccgcaactacgccaactaaaacaacactgaaaaaaccc
ctggatgatagagttctcagtcctgttactgccagacctaaagtcacaatgaaaggacat
gacaggggcttggttttgacgtccaggctctctgataacagagttagcacagtgacaagg
gccacccctattcaacagaccccggtttctgtaacctcaaccacctctgtgccctggatc
agatccaggacttcaagtcccagcaactccctctccacggcctacggctcctccacaacc
tcaggcctcgtcaaggtcttacagcacaccacccagcccatattcaccgagatcaataac
agcagccatgaatcaagggtagaaatggtgggaagtgttgctgaaagggagaggaggaca
gtggtccctctggctgtggtatccaccctcaccattatctgtctactggtcctggtgggc
atcctcatctactggagaaactgcttccagacggttgacttctacactgaagacaccgcc
tcacccaaagtcatctctgctctgtcttcacctctgctgctcaccacagaagagcacgag
gcgctgtcagtgaagcagtttgtgaagcacgtggcagagctccaccagaccaacaccttc
tccaaggagtttgagattgtgacagagtgttatgaggaggtgcagtcatgcacggtggag
atgggcatcactactgacagctccaaccacccagacaacaagaacaagaaccgatacatc
aacatcatggcctatgaccacagcagagtcaaactactggaagagggaaaaggtggagac
tacatcaatgctaactttgttgatggttttgagcgtacaagggcctacatcgcagcccag
gggcccctgaagtctggaacagaggacttctggaggatggtgtggcaggagaatgttgga
gtcatcgtcatgatcaccaacctgttggagaaggggcggaggaagtgtgaccagtactgg
ccaatggagaaccaggaggagtacggtaatttcctggtgaccctaaaagacaccaagacc
ctggcctactataccctgaggacctttaccctcagagacacctcacaaaaggcttcccag
aggggacgctgtgctgagaggacggtggtccagtaccactacacccagtggcctgacatg
ggcgtgcctgaatacaccctgcctgtcctctccttcgtacgggcctcgacccaggccagg
actcaggacatgggccccgtcctcgtacactgcagtgctggtgtggggaggacagggacc
tacattgtgctggacagcatgttgcaacagatccaggaccagggaacagtcaacatactg
ggcttcctcaaacacgtcagaacacagaggaactacctggtacagacggaggagcagtat
gtgtttatccatgatgccctggtggaggccatcatcagcagggacactctggtgacctct
gatctggtccactcctacgtctcggacctgctgaccactgggccctccggcaggacacgc
atggagagacagttcaagctggtgagtcagcgcagagccagacaggctgactacgccgct
gccctgagagaaggaaacgatgacaaaaacaggacctcctctctcatgccggtggagaga
tccagagtgtgtctgtcatgtccagtggaaggagaatcttcagactacatcaacgcttcc
tatatcatgggttaccacaagagcagggaatttatcctgacccagtctcctctcccctcc
actgtctcggacttctggagaatggtctgggaccacaacgcacagctcatcatctcgctg
cctgacacacacacagcacagcgcgggggggaggagtcgtgtgcgtattggcccagtaag
gatcagccaatcagctgtgagggtttcatagtgtcattctctggagaggaccacatgtgt
ctggccaacgaggagagactggtggtccacgacttcttactggaggccacacaggataac
tatgtcctggaggtgcgtcagtacatgtccccctgctggcccaacccagacagccctgtc
agcggcaccttccagctgctcaacattatcacagaggacagcagacagagagaaggaacc
atagtcgtgcatgaccggctgggtggctcggtggcggggctgttctgtgccctcaccacc
ctggcacatcagctggagcagcagggctctgtggatgtgtacgaggtggcacggatgact
aacctgatgaggcctggtgtcttcaacgacatggagcagtaccagttcatgtacagggcc
gtgttgagtctggtggatagccaggaagaccagagggccctacagtcccctgagaccaac
ggttcagttctcctgggggccaccactgcagcagagagcctggagtccctcatgtaa
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integrated database retrieval system
