Oncorhynchus keta (chum salmon): 118392853
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Entry
118392853 CDS
T09424
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118392853 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118392853 (nipbla)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118392853 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
118392853
NCBI-ProteinID:
XP_035640720
LinkDB
All DBs
Position
14:10653897..10700801
Genome browser
AA seq
2537 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHGLNQVSTEHIELKDNLGSDEPEGDVPALLQTVLSRNPGIFREKNVMQQPMVQQ
YKPIQNSMHGSPAQSANFQQASMSPNPSSRGFVSPQSSSGSRFIPQQNSPVPSPYTPQSP
AGFMQYPHPPSYNQHQQIQQASPMVPGGMRNIHESKGPMTNAAHHHPDRQEDYMSIVHRL
GNEESDPSMRNASFPLRSPQPGCSPVGNEGTPKAGSRPPLILQSPPYMSPREGPPDLLLE
SPDQRKKQQKKKLVGKEDKDAYDIVTSPSKDTTKLTLSLSRVKSEEEVEDPSGELLPVMM
DQNSDLEGELGCQQVPVLQNVGVIKGQEGPLSSPFDEAELDALAEIERIERESASERERC
SKEVQDKDKPLKKRKQDSFPLEPGAGGTAGTTGAPGSGGGGNAGKLIPQEATAAGNGASR
PALMVSIDLQQAGRADGQLDPCMAAPIPALEAQRWPEEPAEGPAAEGSDTAGVLRLKADN
RPEVIKNSMDKHDNHREPSRHRHDGKQDRRPDTPKSSSREHGRDRERRHRNEDRRSPEER
YRPDSPRVKQEGRGGGFDPSGRPRSDRPGFRSPSGGEAARNRPDGVKQLQPERKSGEFPA
YLLGGQGSGGLKNFVIPKMKRDGGAVDVAEGWGQPRVKLERLGVRGLVDHISKRPKPVVV
LQKLSFDEVQRIIRVKDRHGSKSGKNRFLSGKSGRGGLDQSVLEELPPELLAEMESTMPL
CERVKMNKRKRSTVKEKPKYTEVDSDDDSNGESARKRQRKNRGDKAWEYEPERERRGSGD
HRRSKGFQEGCRGSNSCYRDSSDEESPPPSMSDIARQMKKKENQKKRKAYEPKLTHQELM
DSSTFKRFSSSVDNILENLEDVDFTQMDDDEIPQELLLGKQQLNELGSESAKIKAMGITC
RIPSDKLVKVLNILEKNIQDGARLSTLMSHDNDEDEEKLWRDLIMERVTKSADACLTALN
IMTSAHMPKAVYMEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAKCS
THKQRVIVMLYNKVCDMVSNISELLEIQLLTDTTILQISSMGITPFFVESVSELQLCAIK
LVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDRDGEPMYIQMVTALVLQ
LIQCVVHLPNDRDGMEDEYDSKVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQGSEED
YRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDYLGTVA
ARLRKDAVTSKMDQRSIDRILKETQGDDETQQLQKALLDYMEENTETDPSLLFARKFYIA
QWFRDTTIETEKTMKSQKRDREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRKIIKTV
PSHFTTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMK
CLSEVVSVDPSILSRLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLI
ERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQKLW
FTPTPAHDKDTMTRKILNITDVVTACKDTGYDWFEQLLQNLLKVEEDAAYKPAQKACVQL
VDNLVEHILKYEESLTESKGVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYLTTKCN
NASDFMVICNVAKILELVIPLLEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVV
NKVTHNYKFVWSCFNRYYGALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALCRHFEF
DMEEFKGITKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFSPEVKTLY
NGILADRSTSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISSGMSS
SIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRN
KADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIMASRKSIIRGFRHDETTSALCAHLF
SMVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQSQEEPLFIMHHIDIT
LSVSGSNLLQTFKESLLKEPRRRELKVRKERQSKNGSGGEEDEDKEICDSPRSDENSNPD
DDDEVVRRPKKSKRPVAVEEPSSESDLDLEDLDVEDVDRVMRRLPENATSLLDFANASQG
ILLLLVLKQHLKNLYSFSDSKIQKYSPTESAKVYDKAVNRKTNIHFKPRQTIDFLSNNWA
NVVFTHDIKTRIVKQYLDFKTLMEHLDPDEEDEEGEAAQASANIRNKAINALLGGAGHGH
LAPVEYDEDDESEEDERNPGSSRRARRSGDPGNLNESLDSMDVIAIHCPKHKDRPQLARV
IQKIGTGYSVHWMSGSYSGPWADAKKRDGRKTVPWVDTIKESDIIYKKIALTSNHKLSNK
MAQTLRSLYAAKEGTSS
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggattgctagccttaca
gacttgttgaatcagctacccctgccctctcctctcccagccaccaccaccaaaagcctg
ctctacaatgggaggattgcagaggaggtcaactgcctgctggcctgccgggacgagaac
ctggtctcccagctggcccacggtcttaaccaggtttccacagagcacatagagctgaag
gacaacctgggcagtgatgagccagagggcgacgtgccggcgctgctccagacggtgctg
tccaggaaccccggcatcttcagggagaaaaatgtcatgcagcagccgatggtgcaacag
tacaaaccaatacagaattccatgcatggcagcccagcccagtcagcaaactttcagcag
gcttcaatgtctcctaatccatctagccggggatttgtctccccacagtcgagctcaggg
agtcggttcatcccccagcagaacagccctgtgcccagcccatacactccccagagccca
gctgggttcatgcagtaccctcacccccccagctacaatcagcaccaacagatacagcaa
gccagccccatggtccctggaggcatgaggaacatccatgagagcaagggaccgatgacc
aacgctgcccaccaccacccagacagacaggaggactacatgagtatagttcacagactg
gggaacgaggagagtgacccctccatgagaaacgcctcgttccctctgaggtcgcctcag
cctgggtgctcacccgtgggaaacgaaggaacacccaaagctggttcaaggcctccgctc
atccttcagtctcctccgtatatgtctccccgggaaggccccccggacctgctactggag
tctcccgaccagaggaagaaacagcagaagaagaagctggtgggcaaagaggacaaggat
gcgtacgacatcgtcacctcgccctccaaggacaccaccaagctgacgctgtcgctgtca
cgggtgaagtcggaggaggaggtggaggacccctctggtgagctgctgccagtcatgatg
gatcagaactctgacctagagggcgagcttgggtgccagcaggtccctgtgctgcagaac
gtgggggttattaaagggcaggagggccctctctcgtcgccttttgatgaggcggagctg
gacgccctggcggagattgagaggatagagcgtgagtcggccagtgagagggagcgctgc
tccaaagaggtgcaagataaagacaagcccctgaagaagcgaaagcaagactcgtttcca
ctggagcctggagcagggggcacagcaggcaccaccggtgcgccaggcagcggaggaggg
ggcaatgcaggcaaactgatcccccaggaggctacagcggcaggaaacggagctagcaga
ccagccctcatggtcagcatcgacctgcaacaggcgggccgggccgacggccagcttgac
ccttgcatggctgcgcccatcccggccctggaggcacaacgctggcccgaggagcctgcc
gagggccctgcagccgaaggatccgacacggccggggtgctccggctcaaagccgacaat
cgacccgaggtcatcaagaacagcatggacaaacacgacaaccaccgtgagccatccagg
caccggcatgacggaaagcaagaccggcgccctgacacacctaagtcatcgagcagagag
cacgggcgggaccgggagaggcggcacaggaatgaagacaggcgctcgccagaggagcgc
taccggccggacagccccagggtcaaacaggagggccgtggaggtggctttgaccccagt
gggcggcctcggagcgacagacccggcttcaggtcccccagcggaggagaggcggccaga
aaccgcccagatggagtcaaacaactacagcctgagagaaagtcaggagagttccctgct
tacctgctgggggggcaagggtctgggggtctgaagaactttgtgatccccaagatgaag
cgggacggcggagctgtggacgtggcagaaggctggggtcagccccgggtcaagctggag
cggctgggggttcggggtctagtggaccacataagtaagagacccaagcctgtcgtggtg
ctgcagaagctctcttttgatgaggtgcagaggatcatcagggttaaggaccgtcacggc
tccaagtctggcaagaacaggttcctctcaggaaagtcaggcagaggtggactagaccag
tctgtgctggaagagcttcctcctgaactgttggcggagatggagtccaccatgccactg
tgcgagagggtgaagatgaacaagcgtaagcggagtacggtcaaagagaagcccaagtac
acagaggtcgactcggacgacgattccaacggggaatctgccaggaagcgccagaggaag
aaccggggggacaaggcctgggagtatgagccggagcgggagaggaggggctctggagac
cataggcggagtaagggcttccaagagggatgcagaggctctaacagctgctaccgggac
tcttctgatgaggagtcgcccccacccagcatgagtgacattgccaggcagatgaagaaa
aaagagaaccagaaaaagaggaaagcctatgagcccaagctcactcaccaggaactgatg
gactcgtccacattcaaaagattctcctccagtgttgacaacatcctagagaatctggag
gatgtggactttacgcagatggacgacgatgagatcccacaggagctgctgctgggtaaa
cagcagttgaacgagctgggcagcgagtcggccaagatcaaggccatgggcatcacctgc
aggataccgtcggataagctggtgaaggtactgaacatcctggagaaaaacatccaggat
ggggccaggctctcgacgctcatgagccatgacaacgacgaagatgaggagaagctgtgg
cgagacctcattatggagcgcgtgaccaagtcggccgacgcctgtctgacggccctcaac
atcatgacgtccgcccacatgcccaaggcagtatacatggaggacgtgatcgagagggtt
ctccagtacaccaagttccacctgcagaacaccctctacccccagtacgaccctgtctat
agggtggaccctcacggaggtggcctgctgagctccaaggcgaagcgggccaagtgctcc
acccacaagcagcgggtcattgtcatgctgtacaacaaggtgtgcgacatggtcagcaac
atctctgagctgctggagattcagctgctcaccgacaccaccatcctccagatctcctca
atgggcatcacccctttctttgtggagagtgtcagtgagctgcagctgtgtgccatcaag
ctggtgacggcggtgttctcccgctatgagaagcacaggcagctgattctggaagagatc
ttcacatctctggccagactgcccaccagcaaacgcagtctccgcaacttcaggctgaac
agcagcgacagggacggcgagcccatgtacatccaaatggttacagccctggtgctacag
ctcattcagtgcgtggtacacctcccaaacgaccgcgacggcatggaggacgagtacgac
agcaaggtagatcaggacttgctgatcaccaacaactatgagactgccatgaggacagct
cagaacttcctctcggtgttcctcaaaaagtgtggcagtaagcaggggagcgaggaggac
tacaggcctctgtttgagaactttgtccaggacctgctctccacggtcaacaagccagag
tggcccgctgccgagctgctgttgagcctgttaggcagactgctggtgcaccagttcagt
aacaagcagacggagatgaccctgagggttgcctccctggactatctaggcacggtggcc
gctcgcctgcgcaaagatgccgtcaccagcaagatggaccagcgatccattgaccgcatc
ctgaaagagacccaaggtgacgacgagacccagcaactgcagaaagcccttctggactac
atggaggagaacacagagacagacccttcactattgtttgccaggaagttctacatagcg
cagtggttccgcgacaccaccatagagaccgagaagaccatgaagagccagaaacgggat
cgggaagaggactcgtcggacggccctggccaccacgccaaggacattgagaccattggg
gaggtcatgcagcgtgccgaggcacgcaagaagttcctccgcaagatcataaagacggtc
ccctcccatttcaccaccctgagaatgaactctgacacggtggactacgacgactcctgt
ctcatcgtccgctacttagcctccatgaggccgttcgcccagagctttgatatttactta
acccagatcttgcgagtcctgggggagagtgcaatcgctgtccggacaaaagccatgaaa
tgtctgtctgaggtggtttctgtggatcctagcattctttccaggttggacatgcagcgc
ggagtgcatggccgtctgatggacaactccaccagcgtgcgggaggcggccgtggagctt
ctgggccgcttcgttctgagccgaccccagctcactgagcagtactacgacatgcttatc
gagaggattctggacacgggtatcagcgtgaggaagagggtgattaagatcctgagagac
atctgtctggagcagcccaccttcaacaagattacagagatgtgtgtgaggatgatccgt
cgggtcaacgacgaggagggcattaagaaactagtcaacgaaacattccagaagctgtgg
ttcaccccgaccccggcccacgacaaagacactatgaccaggaagatcctcaacataact
gacgtggtcacggcttgcaaagacacgggctacgattggttcgagcaactccttcaaaat
ctgttgaaagtggaggaagacgctgcctacaaaccggcccagaaggcttgtgtgcagctc
gtggacaatcttgtggagcacatcctcaaatacgaggagtctcttacagaaagtaaaggg
gtgaactccacccgcctggtgtcctgcatcaccactctcttcctgttcagcaagatccgg
gctcagctcatcgtcaaacacgccatgaccatgcaaccctacctgaccaccaagtgcaat
aacgccagcgacttcatggtgatctgtaatgtggccaagatcctggagctggtgatccct
ctgttggagcacccctctgagaccttcctcaccaccatagaggaagacctgatgaaactc
atcatcaaatacggcatgacggttgtccaacattgtgtcagctgcctcggagccgtggtc
aacaaggtgacccacaactataagtttgtgtggtcttgctttaacagatactacggtgct
ctgaccaagctgaagacgcagcaccaggaagatcccaacagtacagctctggctgccaac
aagccggccctcctgcgctccctcttcaccgtgggagccttgtgtcgacactttgagttc
gacatggaggagttcaagggcatcaccaaggtggtaatcaaagagaaggtgctggagctg
ctgctctactttaccaaacatgaggacgaggaggtgaagaccaaggctatcatcggctta
ggcttcctggtgatcatgcacccaagccagatgttttcccccgaggtgaagaccctgtac
aacggaatcctggccgacaggagcacctcggtcaacttgaagatccaggtgttgaagaac
ctgcagacctatctgcaggaggaggactcgcgcatgcaggaggctgaccagcagtggaag
aagctgtccaagcaggaggacctgaaggagatgggggatatctcatcgggcatgagcagt
tccatcatgcagctgtacctcaagcaggtgctggaagccttcttccacacccagtccagc
gtgcgccactttgccctcaacgtcatcgcactcaccctcaaccagggcctcatccacccc
gtgcagtgtgtaccgtatctcatcgccatgggaacggaccccgagcccagtatgagaaac
aaagcggaccagcagttggtggagatcgacaagaagtacaccggattcattcacatgaag
gcagtggctgggatgaagatgtcctaccaggtgcagcaggccatcatggcgtcccgcaag
agcatcatccgaggctttcggcatgacgagaccacctcggccctctgcgcccacctcttc
tccatggtccgagggaaccggcagcaccggcgagccttcctcatctccctgctcaacctg
tttgacgacagctccaagactgaagtgaacatgctgctgttcatagctgacaacctggcc
tgtttcccctaccagagccaggaggagcccctcttcattatgcaccatatcgacatcaca
ctgtctgtgtccggcagcaacctgctgcagaccttcaaagagtctctgttgaaggagccg
cggcgccgcgagctcaaagttagaaaggagcgccagtcaaagaacggctctggcggggag
gaggacgaggacaaggagatctgtgactcacccaggagcgatgaaaactcaaaccctgat
gatgacgatgaggtggtgcggcggcctaagaagtccaagaggccggtggctgtggaggaa
cccagctcggagtcggatttagacctggaagacctggacgtggaagatgtggaccgggtg
atgcggcgactgcctgagaacgccacgtcgctcctggactttgccaacgcctcgcagggc
atcctgctgctcctcgtgctcaaacagcacctcaagaacctttacagcttctcagacagc
aaaatccagaagtactcgccgactgagtcagccaaagtgtacgacaaggcggtgaacaga
aagacaaacatccacttcaaaccccgacagaccatcgacttcctgtccaacaactgggcc
aacgtggtgttcactcacgatatcaagacgaggatagtcaagcagtacctggatttcaaa
accctgatggaacacttggacccagacgaggaggacgaggagggcgaggcggcacaggcc
agcgccaacatccggaacaaagccataaacgcactgcttggaggggccggccacgggcat
cttgcaccagtagagtatgatgaggatgacgagagtgaagaagatgagagaaaccctggg
tcctctcggcgggcgagacgttcaggggaccctgggaacctcaacgagagcttggactct
atggacgtcatcgccatccattgccccaagcacaaggaccgtccgcagctcgcccgggtc
atccagaagatcggcacaggctacagcgtgcactggatgtccggctcctactctggcccc
tgggccgacgcaaagaaacgggacggacgcaaaacggtgccttgggtggacactattaag
gagtctgacatcatttacaaaaaaatcgccttgaccagtaaccacaaactgagtaacaaa
atggcgcagactttacggtcactgtacgctgccaaggaggggacttccagttaa
DBGET
integrated database retrieval system