Oncorhynchus keta (chum salmon): 118392889
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Entry
118392889 CDS
T09424
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118392889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118392889
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118392889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
118392889
NCBI-ProteinID:
XP_052317111
LinkDB
All DBs
Position
14:14817650..14848914
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AA seq
1137 aa
AA seq
DB search
MKATAKEQMEQSESSHDEEDEGPTRAKRGKPEVVQNGLLRPVKLSRGDLYKPPTADELNQ
LKEAESLFHCSLLKMQMEELLKEVSLSERRKQLIDSFVQSVTEQLQTVPQTSDMELSDLS
WLSGGVKVPFVLVPKAAKGKFHMAPPISVTIIGSYPLGTCTKPGISVDLAVAIPADVLHP
KDALNQRYPRKRAIYLAGLAQHLAASPAIGAMRYSCLHGNRLRPILLLSPPGKDSSSFTL
RLHACPPPGFFKPSRFHPQRNNIRTDWYTGLGSSQPATNEPPTPHYNSSVLGDMLPRAHL
QFLTAVSSQCAAFAEGVALLKVWLRQRELDQGVGCFSGFLGSMLLAYLLSCHRVSNTMTA
YQLLRNSLHFLAFNDLTENGITLAKGPDSTAPSLAEFHTAFQVVFVDPSGHLNMCADMTA
CTYKQVQHEASLSLQFWDDPTVDGFHALLMTPKPMIRTSDHVFQLCELVKLQCCCKKLNL
LSELMDHSGNYVVTALPFILSLLQRGLGQRVRLLTHSLTPDPEWPVESDAPKHNAQPPLS
FGLLLNPEQAASVLERGPPADSPKAEEFRQLWGSRSELRRFQDGDITEAVVWEGETTCQK
RLVPRQLITHLLQLHADIPESCVRYIGGMLDDVIKVGREVCSTGEEESLKVVQSYDDLSR
KLWTLEGLPLSITSVQGAHPALRYTQVFPPVPLKLDYSFFDREKLSRSLVPHEVKPCPVY
ITPIQVICHMEGSGKWPHDRVAIRHIKAAFHISLGELLTQHHHYTCQPSPTHLDVWKDGL
VFRIQVAYHREPQVLRESVSPGGLLIVRDNAEAQALEMATMQRPLLTSTLHGLQQLHPCF
GAVCRLAKRWLGAQLFSDDITEDTADLLVASLFLQPAPFTPPGSPQVGFLRFLHLLSSFD
WRNNPLVVNLNSQLTAADYTEIKNDFIASRESLPVMFMATPNDKKVSIWTKQAPTVQMLQ
RAVMVAAESLKILEPQLMDTSQIQDVRVVMRPPLDPYDVLIHLSPKQVPLLSQAVDPPHA
TFSRGILAGRVANTGGALPVIDFNPVTHYLAELRDAFGDLALFFYDPYGGTVIAVLWKPK
AFTPLPFKTSQMVARRVEVSGEEAHTVPNVEAILEDFRVMGQGLVKSVEPRTERWVV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagccaaggagcagatggagcaatcagagtcttcgcacgatgaggaagat
gagggcccgaccagggccaaaaggggtaagcccgaggtggtccagaacgggctcctccgt
cccgtgaagctgtcgcgcggtgacctctacaaacctcccaccgcagatgaactaaaccag
ctcaaggaggccgagagcctgttccactgcagcctgctcaagatgcagatggaggagctg
ctgaaggaggtttccctgagtgagcgcaggaagcagctgattgactcttttgtccagagt
gtgactgagcagctccagactgtaccacagacttctgacatggagctaagtgacttgtca
tggttgtcaggaggggtgaaggtcccctttgtcttggtgccaaaggcagccaagggcaag
tttcacatggcaccacccatatctgttaccatcataggcagctacccactgggcacctgc
accaaaccaggcatctcagttgatctggcagtcgctattcctgctgatgtcctgcaccct
aaagatgccttaaaccagaggtacccacggaagagggcgatttacctggcaggactggca
caacatcttgctgcctctcctgccatcggggccatgcggtactcatgtctccatggcaac
cgcctccgtcctatcctgttgctttcccctccaggcaaagactcctccagtttcaccttg
cgactccacgcctgccctccaccgggcttcttcaagcccagccgcttccacccccagagg
aacaacatccgcaccgactggtatactggcctggggagctctcagccagcgacaaatgag
ccgcccactccccactacaacagctctgttcttggggacatgctacccagggcccacctg
cagttcctgactgctgtgagctcccagtgtgccgcctttgcagagggagtggcactgctc
aaagtgtggctcagacagagggagctggaccagggtgttgggtgtttcagtggattcctg
ggctccatgctgctggcatacctcctctcctgccacagagtcagcaacaccatgacagcc
taccagctgctccgcaacagcctgcattttctggctttcaacgacctgaccgagaatgga
attaccctagccaaaggcccagattcaacagcgccctctctcgccgagttccacactgct
ttccaggttgtttttgtcgacccctctggacacctcaacatgtgtgctgacatgacagcc
tgcacctacaaacaggtgcagcacgaggcttctctgtcgctgcagttttgggacgacccc
accgtggatggattccatgccctactcatgacccccaagcccatgatcaggaccagtgac
catgtcttccagttgtgtgagctggtcaagctgcagtgctgctgtaagaaactcaacctc
ctcagtgaactcatggaccacagtggaaactacgtcgtcaccgcactccccttcatcctc
tccctcctgcaacgaggactgggccaaagagtccgtctcctcacccactcactgacccct
gaccccgagtggccggtggagagtgatgctccgaagcacaacgcccagccacccctgtcc
tttggcctgctgctcaacccagaacaggcggcctctgtactggagagaggacccccagcc
gatagtcccaaggctgaggagttcaggcagctgtgggggtctcgctctgagctgcgtcgg
ttccaggacggtgacatcacggaggctgtggtgtgggaaggagagaccacctgtcagaag
agactggtcccacgccagctcatcacccacctgctgcagcttcatgcagatataccagaa
tcctgtgtgagatacattggagggatgctggatgatgtcatcaaagtgggacgtgaggtg
tgcagtactggtgaggaggagagtctgaaggtggttcagtcatatgatgatctaagcagg
aagctgtggacgctggaggggcttcccttgtccataacttcagtgcagggggcccaccca
gccctccgctacacccaggtgttccccccagtgcccctgaagctggactactcattcttt
gacagagagaagttgtcccggtcactggtaccccatgaggtcaaaccttgccctgtgtac
atcacccctatccaagtgatctgccacatggagggcagtgggaagtggcctcatgacaga
gtggccatccgccacattaaagcagccttccacatcagcctgggagaactgttaacccaa
caccaccactacacctgccagcccagtcccacacacctggatgtgtggaaggatggcttg
gtgttcaggatccaggtagcgtaccaccgggagcctcaggtcctgagggagagtgttagt
ccagggggcctgctcatcgtcagggacaatgcggaggctcaggccctggagatggccacc
atgcagcggcccctactcaccagcaccctgcacgggctccagcagctccacccgtgcttc
ggggcggtgtgtcgcctggccaagcgctggctgggagcgcagctctttagcgatgacatc
acagaggacactgctgacctgctggtggcgtccctcttcctgcagccggcccccttcact
cctccagggtctcctcaggtcggtttccttcggtttctccacctactctcctccttcgat
tggagaaataaccccctggttgtcaacctcaacagccagctcaccgctgctgactacact
gagatcaagaatgacttcatagcctccagagagtctctgcctgttatgttcatggctaca
cccaacgacaagaaagtctccatttggaccaagcaggctcccactgtgcagatgttgcag
cgtgcggtgatggtggctgcagagagcctgaagatcctagaacctcagctgatggacacc
agccagatacaggacgtcagggtggtcatgcggcctccattggatccctatgatgtcctg
atccacctgagccccaagcaggtgcccttactgagccaggcagtggacccgcctcatgcc
accttcagcaggggcatcctggctggcagagtggccaacactggaggggcactacccgtc
atcgacttcaaccccgtcacccactacctggcagagctcagggatgcatttggagacctg
gctctgttcttctatgacccctatggcggcactgtgatcgcggtgttatggaaacccaaa
gccttcaccccactgccgttcaagacctcccagatggtggctcgtcgtgtggaggtgagt
ggggaggaggctcacactgtccccaacgtggaggccatcctggaggatttcagggtcatg
ggccagggcctggtgaagtcggtggagccaaggacggagagatgggtggtgtag
DBGET
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