Oncorhynchus keta (chum salmon): 118393082
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Entry
118393082 CDS
T09424
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118393082
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
118393082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
118393082
NCBI-ProteinID:
XP_052317365
LinkDB
All DBs
Position
14:25688946..25822000
Genome browser
AA seq
1540 aa
AA seq
DB search
MAADVGSMFQYWKKFDLRRLQRELNSVASELAGRQEESEHSHKHLVELSREFKRNVSEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPAPVLEATHTLEERLQQLQ
SSAPDSEALVREVSRHWRRHLECLNKPDDTEDSPAAASGAVEASSRTACVMTPKSKQAFR
ATCSPQQIQSQTEGKAEDADTTLADRLGEAEERIKVLRSSLSTAQTDLLDLRCKYDQEKA
NKVEEVSVIMMNLETANQKAEMAQRQVERLKEQLASARSTTPGSYNPPEGTSGERDEKGG
VLSSKLEAKLIAKDREILRLLENVQRLQFSLQEVQDTSANQIISLEHQLAYKTEAIERLE
TKLQSQMDYDEIKTDLSILKVMKLASANGSSSQESAKAAEALLLDKEAFLPSHKYLMDKA
RVLHNNDEDQSEESGREGGRPTGSFFSVSQVDVRTSASPGPPTMEVSSSSYDLPRPFSVS
PCSGGRLSVDHVLHKQLLCSPLFKKEAGSPIMAFPTVLYAAKAALMSTNQGPAGTGGIEA
GLPSDQSESGSSTAGDDDQLETADIAFQIKEQLLKHNIGQRVFGHYVLGLSQGSVSEILA
RPKPWRKLTVKGKEPFIKMKQFLSDEQNILALRTIQVRQRGSITPRIRTPETGSDDAIKN
ILEQAKKEIQSQRGDGSGTGDIKSSLGSPSGRSSNGADSSSDDTIKNILEQARREMQAQQ
QALMEMEVCGRASATSAGPQVKRLGLPEPSKGLPLPTFIKQEEGGTVTMCMANPISSPQT
PLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGSGSSQPFTSVSPS
LSSSSSSGPSALPRLENGECLPNSEEASAAEEDTGSGMMQSVEVKMESDVSVSGESTGRG
MAYYPSYIPRTLKPTVPPLTPEQYEMYMYREVDTIELTRQVKEKLAKNGICQRIFGEKVL
GLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQGLNQLPSQSLSQDKSPVTA
QSSPSPPPSPEEIHSSPLVEPVSLTLESSKENQQPEGLVNPHPEGGKSTPSLLSLHQPHT
PLGIQELVAMYPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWH
KLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSTGSDSDSPSASSEC
VSPALVSIDLCPYSQVKKPRVVLGAEEKDALRKAYLLEPYPSQHTIEILASQLNLKTNTV
INWFHNYSRSRMRREVLMEGLQDNDMDAEHHSYSPSATQSPTSDGDERGLLHPTGRTPHP
ILPLSANTSLPHVKQEASEGEEEEREGFNGQSKIQCFSMGVQFPQLKTEHGDLMVGCQEP
HLAPHYIQSLRQEEGMSSQAQGLFHGELSLDGPQRASQSRHEGDNSSKSFVDPVSFKASS
EPCRSSLEVSLNSPSAASSPGLMMSVSPVPSSSTPISPSLPNPPTTSTNHSLDPNSLPPI
QSPKPNKSVQRRTEKMANLNNIIHRLERAANREETLEWEF
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttgatctacggcggctt
cagagggagttaaactcagtagcgtctgagctggcagggcggcaggaagagagcgagcac
tcgcacaagcacctggtggagctgagccgggagttcaagagaaatgtctcagaggaagtg
cgggagatggtggctcctgtcctcaagagtttccaagcccaggtggttgctctgaacaag
cgcagtaaggaggcagagtctgcattcctgggaatctacaagcagcttatcgaagcccca
gacccagctcctgtgctggaggccacacacactctggaggagaggctgcagcagctgcag
agttcggccccagacagtgaggccctggtcagggaggtcagcaggcactggaggagacac
ctggagtgccttaacaagccagacgacacagaggacagcccagcagcagcatcaggagct
gtggaggcatcgagccgcaccgcctgtgtgatgactcccaaaagcaaacaggccttcagg
gccacatgctcacctcagcagatccagagtcagacagaggggaaggccgaagacgcagat
accactctggccgacagactgggtgaggccgaggagaggatcaaagtgctgcgttcatct
ctgagcacagcccagacagacctgctggacctgcggtgtaaatacgaccaggagaaggcc
aacaaggtagaggaggtcagcgtgatcatgatgaaccttgagacggcgaaccagaaagcg
gagatggcccagagacaggtggaaaggctaaaggagcagctggccagtgcccggagcacc
accccaggcagctataatccaccagagggcactagtggggagagggatgagaaaggtggc
gtgttgtcatccaagttggaggctaagctgattgctaaagaccgtgagatcctcaggctg
ttggagaacgtacagagactgcagttctcactacaggaagtccaggacacctcagccaat
cagatcatatcgctggaacaccagctggcctataaaacagaagctattgagagattagaa
actaaactgcaatcccagatggactatgacgagattaaaacagatctcagtatcctgaag
gtaatgaagttggcctcagcgaatggtagctcatcccaggaatctgccaaggctgcagag
gctcttttgctggacaaagaggcctttcttccctctcacaaatacctgatggataaggcc
agagtcttacacaacaatgatgaggaccaatcggaggagtcaggcagagaggggggcagg
cccacagggtccttcttctcagtctcccaggtggatgtgcgtacctcggccagccctggt
cctcccaccatggaagtctcctcctctagctacgacctcccccgccccttttctgtgtcc
ccctgctcagggggcaggctgtctgtggaccacgtcctccacaagcagcttctctgctcc
ccacttttcaagaaggaagccggcagccccatcatggccttccccaccgtcctgtacgca
gccaaagccgccctaatgtcaaccaatcagggacctgcaggaactgggggcattgaggct
ggcctgcccagcgaccaatcagagagtgggagctccactgcaggcgatgatgaccagttg
gagacagcagatattgccttccagatcaaagagcagctgctgaagcacaacattggccag
cgtgtgtttggtcactacgtgctgggcctatcacagggctcggtcagtgagatcctggcc
cggcccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatcaagatgaaa
cagttcctgtctgatgagcagaacattctggccctcagaaccatccaggtccgacagaga
gggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgccatcaagaat
atcttggagcaggccaagaaggagatccagtcccagagaggagatgggtctggaacaggt
gacattaagtcgtccctgggcagcccctcgggcaggagcagtaacggggcagacagcagc
tcagacgacaccatcaagaacatcctggagcaggccaggagggagatgcaggcgcagcag
caggctctgatggagatggaggtctgtggtagggcctctgccaccagcgctgggccccaa
gtgaagcgcctggggctccctgagccctccaagggcctgcccctacccaccttcatcaaa
caggaggaggggggcacggtgactatgtgcatggccaaccccatcagcagcccccaaacc
ccccttagtgtcctctcccctgccgccttcgttcagaacatcatccgtaaagtcaagtca
gagatcggcgaggcagggacttacttcgaccagcactggtctgtggagcgggggcccata
ggcatggtgggcggcgtagggagcggcagctctcagcccttcacctcagtgtctccctcc
ctgtcctcttcctcgtcctcgggcccctcggcccttccccggttggagaacggagagtgt
ctgcccaacagtgaggaggcgtctgcggccgaggaggacactggctcggggatgatgcag
tctgtggaggtgaagatggagtcagacgtgtcagtgagtggagagtcaactggccgtggc
atggcctactacccatcatatatcccccgcaccctgaagcccaccgtgccgcccctgaca
ccggagcagtatgagatgtacatgtatcgcgaggtggacaccatcgaactcacccgacag
gtcaaagagaagctggccaagaatggcatctgtcagaggatctttggtgaaaaggtgctg
ggtctgtctcagggcagtgtgagtgacatgctgtctcggcccaaaccctggagcaagctg
acccagaaaggcagggaaccctttatccgcatgcagctgtggctgctggatcagctggga
caaggactcaaccagctccccagccagagcctctctcaagataaaagcccagtgacggcc
cagtcgtcgccctccccgccccccagcccagaggagatccactccagcccgctggtggag
cccgtcagcctgaccctggagagcagcaaggagaaccagcagcccgagggcctggtgaac
ccccacccagagggagggaagtccacccccagtctgctttcccttcaccagccccacacc
ccgctgggcatccaggagctggtggccatgtacccagagttggacacatacgctatcacc
aagaaagtcaaggaggtactgacagacaacaacctaggccagcggctgtttggggagagt
atactgggcctcacccagggctcagtgtcagacctgctctccaggcccaagccctggcat
aaactcagcctcaaaggcagggaaccttttgtccgcatgcaattgtggctcaacgacccg
cacaatgtggacaagctgagggacatgaagaaaatggagaagaaagcctatctgaagcgg
cggtatggactgctgagtaccggctcagatagtgactctcccagcgccagctctgagtgt
gtgagcccggccctggtctccatagatctgtgtccctacagccaggtgaagaagcccagg
gtggtgctgggggctgaggagaaggatgctctgagaaaggcctatctcctggagccatac
ccatcccagcacaccattgagatactggcctctcagctcaacctcaaaaccaatacagtc
atcaactggtttcacaactatagcaggtccaggatgcgacgggaggtcctcatggagggt
ctccaggacaacgacatggatgcagaacaccacagctactctccctcggcaacacagagc
cccacctcagacggggatgagagggggctgctgcaccccactggacgcaccccccacccc
atcctccccctcagcgccaacacatcactgcctcatgtcaaacaggaggccagtgaggga
gaggaggaggagagggagggcttcaacggacagtctaagatccagtgtttctctatgggc
gtccagttccctcagttgaaaacggagcacggggacctgatggttggctgccaagagccc
cacctggctccacactatattcagagcctgaggcaggaagaagggatgagtagccaggct
caggggctcttccatggggagctctccctagatggcccccagagagccagccagtccagg
cacgagggtgacaactccagcaagtcttttgtagacccagtcagtttcaaggcatcatcg
gagccctgtcgcagcagcctagaggtctccctcaactccccctccgctgcctcctcaccc
ggcctcatgatgtccgtctcccctgtcccgtcttcctctacacccatctccccatccctg
cccaacccacccaccacaagcaccaaccacagcctggaccctaactccctgcctcccatc
cagagccccaagcccaacaagagtgttcagagacgcactgagaaaatggccaacctcaac
aatatcatccataggctggaaagagcagctaaccgggaggagaccctggagtgggagttt
tag
DBGET
integrated database retrieval system
