Oncorhynchus keta (chum salmon): 118393184
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Entry
118393184 CDS
T09424
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00061
Fatty acid biosynthesis
oke00071
Fatty acid degradation
oke01100
Metabolic pathways
oke01212
Fatty acid metabolism
oke03320
PPAR signaling pathway
oke04146
Peroxisome
oke04216
Ferroptosis
oke04920
Adipocytokine signaling pathway
Module
oke_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
118393184
00071 Fatty acid degradation
118393184
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118393184
09143 Cell growth and death
04216 Ferroptosis
118393184
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118393184
03320 PPAR signaling pathway
118393184
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oke01004
]
118393184
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118393184
Enzymes [BR:
oke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
118393184
Lipid biosynthesis proteins [BR:
oke01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118393184
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of breast milk
118393184
Exosomal proteins of breast cancer cells
118393184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118393184
NCBI-ProteinID:
XP_035641488
LinkDB
All DBs
Position
14:complement(30309583..30326005)
Genome browser
AA seq
717 aa
AA seq
DB search
MHFQEWLQSLRTSGGVRGPENKDFWSLVPSLPLSSSFSFSSLSLSPSSLLGIGALASFTA
YWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQLVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTL
SCLVLFNPCSDAIVERGKNCGVEILELTQLMELGRQNLKDPAPPQPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTTEALDRDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCV
PVLQVFVHGDSLQSHLIGVVVPDPEVFIDWVKKRGIVGSYEELCQNPDVKKEVLEDMTAV
GKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacaatcccttcgtaccagtgggggggttcgaggacctgaa
aacaaagacttctggagccttgtcccctctctccctttgtcgtcctctttttccttctcc
tccctctctctatccccgtcctctctgctgggtataggggctctggcctccttcactgca
tactggctggtgactcgccctcggcccatgcgccccccttgtgatctgaatgcccagtct
atccctgtacagggagagcccaattggaggcgttcagctttgctcaaggatgatgttctg
ttggagttctactatgatgacaccaggacagcctatgacatgttccagagaggactgaga
gtggcaggggatggcccatgccttggctttaggaaacctggggaaccttaccagtggata
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaccctgagcagttagttggaatatttgcccagaacaggccagagtggatc
atttcagagctggcctgctacaccttctcaatggctgtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggctgagatctccctggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaagggtgtgactcctactctc
tcctgtctggtgctcttcaatccctgcagtgatgccatagtggagagggggaagaactgt
ggagtggagattcttgaactcacacagctcatggaacttggacgacagaacctcaaagat
cctgcgccaccccaaccccaggacctggcagtcgtgtgcttcaccagtggaaccacagga
aagcccaagggagccatgatcacccacggcaacatcgcctccaattcctcctctgttatt
aagatcctggaggggtcatttgtaattcagcaagaggacgtgtcaatatcttacctgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgctatgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggatgatattaagactctgaaacccacc
ttcttcccagtggtgcctcgcctactcaaccgcatctacgacaagatcttaggctccgtg
acgtccccattgcgccgggcagtgctgcactatgcagtgaggaggaagcaggctgagctc
agcagtggggtggtacgtaacaacagtctgtgggacaggctggtgttcaacaggattcag
gctaatttaggaggtaatctgaggttcatcctgaccgcctcggcccccatctcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatctttgagggctacggtcagact
gaatgcacagcaggctgcaccttctccatgccaggtgactggagtgcaggccatgttggt
gctccattgccctgtgccatggtgaagttgattgacattcctgatatgaactattatgcc
aagaacggagaaggagagatctgtatccgtggccacagtgtgttccggggatacctgaaa
gatgaggagaaaacaacagaggccctggaccgtgatggctggctgcacagtggagacgtg
ggccagtggctaccgaatgggacacttcgcatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgagaagattgagaatgtctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggagacagcctacagtctcacctgatcggtgttgtt
gtgccagacccagaagttttcattgactgggttaagaagaggggaatcgttggatcctat
gaggaactctgccagaatccagatgtgaagaaagaagtgttagaagacatgacagccgtg
gggaaggaagctgggctgaagtcatttgagcaggtgaaggacctacacctgcatccagag
atgttcagtgtgagcaacggtctcctcacccccactctgaagaccagacgagtggacatc
cacagggtcttccaggaacagatcacaaacatgtatagcacaacagccatctag
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