Oncorhynchus keta (chum salmon): 118393202
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Entry
118393202 CDS
T09424
Name
(RefSeq) titin-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118393202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118393202
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118393202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
118393202
NCBI-ProteinID:
XP_035641533
LinkDB
All DBs
Position
14:complement(30796959..30812060)
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AA seq
1698 aa
AA seq
DB search
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEATFDLPLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWYK
LLDKNGKEDKVRGEVMMDIQFMRNNLTASMFDLSMQDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLGGSRSSGLNVDSPDVKKKFKFLGHKRTGSNDSKVSTGPFSLLGRSKQKEDP
NSMCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAAVDSLKGAPVNTYRK
ESADRDRALLEQRRLQEEGEKRQAEEKRRNEEKQRVQLKVLQEEECKKQEEECKKQEEEC
KKQEEERKKQEEERKKQEEQERRFQEDEARRKKQQEEEEDRKRLAEERRRLKAGELQRLG
EEQRQQEEAKKAEEQKQQEEASVTERLSSLFGMIRKKEEKKEELQQSVANEVRHNPSPSH
STRDLEVPVPAPRHAANPLKDILLSPDPPIPFEESPVDHQKGVCGTNTPSAAVFNSNRTA
KVSAVKPRLVESLKQPETPNSDSHRQQSPSLSCTESPLSSVPSESPDMFSNLHSSLAPPR
TRRSTSESPCSSTENLTAIGSSPIGSERKRQAPLPPSPMELHGNPNAGSRSVSANCGSLV
SIKEVEAKRPPLPLPDYDRLFPQKRHGVQGQTQWDHIIAEVNQRQQEYTSQLIGEEMSVD
GPGLDSPAPPHNDKYLYLKERAAERLNQQQTQVQEVQSSSWRRVGPNSSPAFIPPPKPGA
AARPRLVMDSNKKQGQNTVQANQTVERHNAFVSKVLGSTIPMAQSNNVPSVKPWEDARKV
PKTSVALASEGHSVLPIEKPTRLTLTEVWVSSCTDGRKGLPNALKEIPATKPRQRLTSKE
PVRQVDPEPKAAESTTNVQQENRSEMRAASIDMRVSSPVMAKNTEVTANSEKQPSPDSVE
SDNNKKQLERFMKETFSEPDPFPIAEVLPKYPWAQPEQSHGGDDLFSGEPQKGDKLEELG
MKTDDLVKHFTPNNSTDLSSSCNDSDSTHPEEKPEEHSPTSQRGFSQRKKERADFDPPAP
PLTDKYSYLQERAAERLDQQRTQVQEVKSSSWRRVGPNSSPALIPPPKPRRLEADSNKKQ
SQSIAQNNPSVERHNTFVSKGLVSTNPMAQSRDVPSVKPREDARKVLNTSVSSANDGKSV
LRLEKPNRPTPQVLVSSSTDEPIGLPNTPKEIPSAKPRQSVISKEQADPELTAEHTTVQQ
ENRSEMRAVSTPDIMESSPTMAKATDSVESDIHKKQLELIMKEPFDDPFPIAEILPKDPW
AQPEQSHSGDDLFSVGPQKDDKLEQRLTTDDLVKLCVPNNPTDLFSSCNDSDPEKHPEEE
KPEGPSPAFQRLFSQRKNKRAAPRPQANLSNKGAMGRGELVKQDASPRENETIRLATTGS
VKLELQAKNTRQRNLYSIEKVETQARKEWTADPFTFSRMSSDLTSPEPPQSVGEPKPQAG
AEGKTLLRAWVSTSEAQPLTVLSSNGDRPDLTPLRPHPVKPMSSMESHALINTPVVRELK
TYDSSLGNMKAPGKVESGPYTQLTQEELITLVVKQQTELSKKDFKIVELEEYIDNLLVRV
IEEKPSILQGLNSPKQAL
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtgaccgtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgagaaatgtgtcgcaccggtatgg
aaggaagaagcaacgtttgacctgccactgttccaccatggcaatgctgaacgctgcaca
ctatacatcatagtaatgcacagagctctggtgggactggacaagctcctgggacgagct
gtgatcaacctacttgatctacacgataacagcgcccgcaaaaagaccgattggtacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgatggacatccag
ttcatgagaaacaacttaacagccagcatgtttgacctttctatgcaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaaaaaaaaggatagcttctctgac
tctgcctctgcaatagtgccctctttcagccaggtagtcactgacagcgagggagaggct
gactcccactcagtatgcccagagtcccctggggccaagaaaaaatccaagctaaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacactgggc
actcttcctgagaagaacgcatccctcggtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaagttcaagttcctgggccacaagcgcacaggcagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagcatgtgcatcaacggcaatcatgtgtatgcagaggaggtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgacgccgccgtagactccctcaagggcgcccctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcgccttcaggaagagggagag
aagaggcaggctgaggagaagagacgtaatgaggagaaacaaagagtgcagctcaaggta
ctgcaggaggaggaatgcaagaaacaggaggaggaatgcaagaaacaggaggaggaatgc
aagaaacaggaggaggaacgcaagaaacaggaggaggaacgcaagaaacaggaggagcag
gagaggaggttccaggaggatgaggcaaggaggaagaagcagcaggaagaggaagaggac
cggaagcggctagcggaagaaagaaggcggctgaaggcgggtgagcttcagaggctgggg
gaggagcagaggcagcaggaggaggccaagaaggcagaggagcagaaacaacaggaggag
gcctctgtgactgagaggctgtcctctctgtttggtatgatcaggaagaaggaggagaag
aaggaagagctgcagcagagtgtcgccaatgaggtgaggcacaacccatctcccagtcac
agcaccagagatttggaggtccctgttcctgcccctcgccatgctgccaacccactcaag
gatattctcctcagtccagaccctccaatcccatttgaggagagcccggtggaccaccag
aagggtgtttgcggcaccaacaccccgagcgctgcagtcttcaactccaaccgcactgcc
aaggtgtctgcagtcaagcccagattggtggagtctctgaagcagcctgaaacccccaac
tcagactcccataggcaacaatctccctccctgtcctgcaccgaatcccctctctctagc
gtcccttctgagtctcctgatatgttctccaaccttcactcctccctggctccacctagg
acacggaggagcacctctgagtccccctgcagcagcactgagaacctgactgccatagga
tcttcccctatcggatctgagaggaagcggcaagctcctctgccccccagcccaatggaa
ctgcatggaaatcccaatgcaggctccagaagtgtgtctgctaattgtggctctcttgtg
tcaattaaggaggttgaggccaaaagacctcctctacctcttcctgactatgatcgcctg
ttcccacagaagaggcatggagtacaaggacagactcaatgggaccatatcattgcagaa
gtgaatcagagacagcaggaatacacatctcagctcattggagaagagatgagcgttgat
ggcccaggcctcgactccccagcacctccacacaatgacaaatatttgtacttgaaggag
agggcagcagaacgccttaaccagcaacagacacaagttcaggaagttcaatcttcatct
tggaggagagtggggcccaacagttcgccagcgttcatcccccctcccaaacctggagct
gcagcccgccctagactagtgatggactcaaacaaaaagcaaggccagaacactgtacag
gctaatcaaactgttgaaagacacaacgccttcgtctccaaagtcttgggctctaccatt
cctatggctcaaagcaacaacgtaccctcagtgaaaccttgggaagatgcaaggaaggtg
cctaaaacatcagttgctttagccagtgaaggccattctgttctcccgatagaaaagcct
actagacttacattaacagaagtttgggtgtcaagttgtacagatggacgtaaaggactg
ccgaacgctctcaaagagatccccgcaaccaaacccagacaaaggttaaccagcaaagag
ccagtgagacaagtggatcctgagccaaaagcagcagagtctactaccaatgtacagcag
gagaacagatcagaaatgagggcagcctccatagacatgagagtgagtagtccagtcatg
gcaaagaacactgaggtaactgctaacagtgaaaagcaaccctcacctgactctgtagaa
agcgacaataacaaaaaacaactggaacgctttatgaaagagacattttctgaacctgac
ccttttcccattgcggaagtcctgcctaaatacccatgggctcaaccagagcagagccac
ggtggagatgacctgttctctggagaaccacagaaaggggacaagcttgaagaactggga
atgaaaactgatgacttggttaaacattttacgccaaacaattcaacagatctgtcctcc
agctgtaatgacagtgactcaacgcatccagaggaaaaaccagaagagcacagtcctact
tctcaaaggggattttcacaaaggaaaaaggaacgcgcagacttcgaccccccagcacct
ccacttactgacaaatattcttacttgcaggagagggcagcagaacgcctagaccagcaa
cggacacaagttcaggaagttaaatcttcatcttggaggagagtggggcccaacagttca
ccagcgcttatcccccctcccaaaccccgtagactagaggccgactcaaacaaaaagcaa
agccagagcattgcacagaataatccatctgttgaaagacacaacacctttgtctccaaa
ggcttagtctctacaaatcctatggctcagagcagagatgtaccctcagtgaaacctcgg
gaagatgcaaggaaggtgcttaatacatctgtttcgtcagccaatgatggcaaatctgtt
ctccgactagaaaagcctaatagacctacaccacaagttttggtgtcaagttctacagat
gaacctataggactgccaaacactcccaaagagatcccctcagccaaacccagacaaagt
gtaatcagcaaagagcaagcagatcctgagctaacagcagagcataccactgtacagcag
gagaacagatccgagatgagggcagtctcaaccccggacatcatggaaagtagtccaacg
atggctaaagctactgactctgtagaaagcgacattcacaaaaaacaactggaactcatt
atgaaagagccgtttgatgaccctttccccattgctgagatcctgcctaaagacccatgg
gcccaaccagagcagagccacagtggcgatgacttgttctctgtaggaccacagaaagac
gacaagcttgaacagagactgacaactgacgatttggttaagctttgtgtgccaaacaac
ccaaccgatctgttctccagttgtaatgacagtgacccagaaaaacatccagaggaagaa
aaaccagaaggccccagtcctgcttttcaaaggttattttctcaaaggaaaaataaacga
gcagcacctcggcctcaagctaatttgagcaataaaggagccatgggaagaggtgagctg
gttaaacaagacgcttcacccagagaaaacgaaacaatcaggttagccactacaggatct
gtcaaacttgagctgcaagccaaaaatactagacagagaaatctctatagtatagaaaag
gtagaaacccaagccaggaaagagtggacagcagacccttttaccttctcccgcatgtct
tctgacctgacttctcctgagcctccccagtcagtaggtgagcccaaaccccaggcaggg
gctgagggtaagaccctgctacgggcctgggtctcaacctctgaggcgcagccactcact
gttctgagtagcaatggagatcggccagacttaacaccactcaggcctcacccagtgaag
cccatgagctccatggagagccatgctctcatcaacaccccagtggtgagagagctgaag
acctatgacagctcactgggaaatatgaaggcaccaggtaaggtggagagtgggccatac
acccagctgacccaggaggagctgattaccctggtggtgaagcagcagacggagctctcc
aagaaggacttcaagatcgttgagttggaggagtacatagacaacctgctggtgcgtgtc
atcgaggagaagcccagcatcctgcaaggcctcaactctcccaagcaggccctgtaa
DBGET
integrated database retrieval system