Oncorhynchus keta (chum salmon): 118393270
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Entry
118393270 CDS
T09424
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118393270 (si:ch211-225b11.1)
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118393270 (si:ch211-225b11.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118393270
NCBI-ProteinID:
XP_035641695
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Position
14:34067198..34126971
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AA seq
608 aa
AA seq
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MGVGSEKTSSTTKGVYKEETDIALKAPLNVNAMLSKKVGHATAERATWGRRLEFVLASVG
YAVGLGNVWRFPYLCYRSGGGAFLIPYFLMLFLCGIPLLFMEFAIGQYTRLGPVHALATI
CPLFKGVGIATVVISFVLCTYYNVLMSWALYYFFNSFRAIFPWQSCNNTWNAVGNCSSGF
PGNATHLQSASQQYFDHRVLEITNGIEDAGGLRWELFGILILAWVIVYLCIFKGVKSTGK
VVYFTATFPYFILFALLINNVQLPGAKDGMLYFLKPKWSKLLEVQVWVNAAAQVFNSIGI
GFGSMISMASYNKFNNNILRDTLIVSLANSATSILAGFVIFSAIGYMAHVHNLPVDNIAT
DGPGLVFVVYPEVFSTMPLPQLWAPLFFFMLLCLGLDSQFAMVEVAVTSIIDGFGPKVLR
VLKRQEVIVLAVCVMGFLLGIPHITKGGMYVFQLMDHYTAVVSLMFLSFFEVIAVCWVFG
LRRMTIMIKRMLGKAPNIYFRSCWMVFSPVLVLCILISSIIQYTPARYGKSYTYPVWAEV
VGWGISLVSIVWIPLGALQEICRNKGSLLQRIKTAVTPTIELDPVNHLPEEQGEDTPESV
FLSIITPL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgggatccgaaaagacatcatccaccaccaagggagtctacaaagaggagact
gatattgctttgaaagcacccttaaacgtgaatgcaatgttatcaaagaaagtggggcac
gcgacagcagaaagagccacctggggtcgccgccttgagttcgtcctcgcgtcagtggga
tacgcggtgggacttgggaacgtgtggcgctttccatacctctgctacaggagcggtgga
ggtgcctttctcattccttactttctcatgctgtttctgtgtggcatcccccttctcttc
atggagtttgctattgggcagtacacccgtctgggaccggtgcatgctctagccacaatc
tgccccttgttcaaaggtgtgggcattgccacagtcgtgatctcctttgtgctctgcacc
tactacaacgttcttatgagctgggcactctactacttcttcaactcattccgagccatc
ttcccctggcagtcctgcaacaacacctggaatgccgtgggtaactgctccagcggtttt
cctggaaacgccacccacctgcaatcagccagtcagcagtactttgatcacagggttctg
gagataaccaatggtattgaggatgcaggaggactacgctgggagctgtttggcatcctc
atcctggcctgggtcatagtctacttgtgcatcttcaaaggcgtcaaatcaactggcaag
gttgtttatttcacagccacgttcccatactttattctgttcgccttgctcatcaacaat
gtccagcttcccggggccaaggatgggatgctctacttcctgaagcctaagtggagcaag
ctgcttgaagttcaggtgtgggttaacgctgcagcccaggtattcaactccattggaatt
ggatttggctccatgatctccatggccagttacaacaagttcaacaataacatccttagg
gacacattgattgtctctttagctaactcggccaccagtatcctggctggctttgtgata
ttctcagcaatcggctacatggctcatgtccacaacctcccagtggacaacatcgccaca
gatggtcctggcttggtgtttgtggtgtatccagaggtcttctccactatgcctctgcca
cagttgtgggctcctctgttcttcttcatgcttctctgcctgggactggacagccagttt
gccatggtggaggtggcggtgacgtccataatagatggcttcggccctaaggtgctgcgt
gtcctgaagagacaggaggtcattgttctggccgtctgtgttatgggcttccttctaggc
attcctcacatcactaaggggggcatgtatgtgttccagctgatggaccactacactgct
gtggtgtcgctcatgttcctgtccttctttgaagtcatcgctgtctgctgggttttcgga
ttgcgtcggatgaccatcatgatcaagagaatgttgggaaaggctcccaacatctatttc
cgctcctgctggatggtcttctcccctgtgctggtcctgtgcattctgatctccagcatc
atccagtacacgccagctcgctatgggaagtcatacacataccctgtctgggcagaggtg
gtgggctggggaatctccctggtctccattgtgtggatcccactgggagccctgcaagag
atctgcagaaataagggctcactgctgcagagaataaaaacagctgtgactcctacaata
gagttggatcctgtcaaccatctgccagaggagcagggcgaagacacaccggagtctgtt
ttcttgtctatcatcactcctctgtaa
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