Oncorhynchus keta (chum salmon): 118393295
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Entry
118393295 CDS
T09424
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118393295 (tfip11)
Spliceosome [BR:
oke03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118393295 (tfip11)
Other components
Complex C specific factors
118393295 (tfip11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
118393295
NCBI-ProteinID:
XP_035641744
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Position
14:34887508..34895610
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AA seq
843 aa
AA seq
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MSMSHLYGRQGEEEDEGVEVEKFEVTEWDLANEFNPERRRHRQTKEEAVYGIWAERGDSD
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEEKQQQQQQIDGGSDDSDNDNTPPAQPPPR
DTAPKKLQTGGHFRGNSQSQRTGFAAGIRAGGDLGTWEKHTKGIGQKLLQKMGYVPGKGL
GKNAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQRELGQWRRD
PAGGGGKKKPKYSYRTVEELKAKGKLAGRTTQTPAGELAQVKVIDMTGREQKVYYSYSQM
TNKLSVPEEAPLSVATREQKMSGFALPELEHNLQLLIDLTEQDILQSSRRLQHERDVVVT
LSHESSGLQTRLGTERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAGVFETLQSEFY
EEYKTLGLGDLAAAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESDQLHHANAPEA
HMDPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWAPLLPLWILNHLLEQLLFPRL
QREVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDGSARLIL
QPWRDVFTPGAWEAFMVKNIIPKLALCLGELVINPHQQQMEPFNWVLDWEGMLSPSSLVS
LLDKHFFSKWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDAVLAQPLVKDKFNEALDIMN
RAVSSGLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRGIGASLPTNFK
DLIQTKAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLID
MAK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtacggacggcagggagaggaggaggatgagggggtggaggta
gagaagtttgaggtgacagaatgggacctggccaatgagtttaacccggagcgtcgcaga
cacagacagaccaaagaggaggccgtctatggcatctgggcagagaggggagactccgac
gatgagagacccagcttcggagggaagaggtctaaggactactctgcccctgtgagtttt
gtgagtgctgggctacgcaagtctgcagcagaggagaagcaacaacaacagcagcagata
gatggagggtcagatgactctgacaatgacaacactccccctgcccaacccccaccccgc
gacactgcacctaagaaactgcagacgggtggtcatttccgtggcaatagccagtcccag
aggacggggtttgcggccggtatccgagctggaggagacttgggcacttgggagaaacac
accaaggggattggccagaaactcctccagaagatgggctatgtaccagggaaaggactg
gggaaaaacgcccagggtattttgaatcccattgaggcaaagcttcggaagggaaagggg
gcggtgggcgcctacggcaacgagagaaccaaacagtcactacaggacttccctgtggtt
gactccgaggaggaggaggagaaggagttccagagggaactaggtcagtggcgtagggac
cctgcaggtggtggagggaagaagaaaccaaagtattcctacaggactgtagaggagctg
aaggctaaaggcaagctggctggacggaccacacagacacccgctggagaactggctcag
gtcaaggtgatagatatgacaggcagggaacagaaggtgtattacagctacagtcagatg
actaacaaactcagtgtaccagaggaggctccactgagtgtggccacacgtgagcagaag
atgtctggctttgccctgccagagctggaacacaacctgcaactattgatcgacctgacg
gaacaagacatactacagtcctcacggcgtctgcagcatgagcgtgacgtggtggtgact
ctaagccacgagagctccggtctgcagacgaggctcgggacggaacgggatgccatccag
aggctagaggcagtactgcagctggtggatcgctttcagagcggggagactgcacccggg
gtaggacccagcctgcaggagtgtgctggtgtttttgagactctacagagtgagttctat
gaggagtacaagactctaggtttgggagatctggctgcggctgtagtacatccactactc
cgagagaaactacgcacatgggatcctctcaaggacagttcatatggtctggaggaggtg
ggtcagtggcgagccatcctggagtctgatcagcttcaccacgccaatgcccctgaagca
cacatggacccataccacaggctgctgtgggaggtgtggatccctgtgctgcgagtgtgt
gtgtcggggtggcagcctcgcatggtaggacccatggtggactgtgtggaggtctgggcc
cctctgctgcccctctggatactaaaccacctcctggaacaactcctcttccccaggctg
cagagagaggtggatagctggaaccccctgaccgacacagtgcccatccactcctggctc
cacccctggctgcctctgctccaatcacggctggagcctctctacccgcccatccgcagt
aaactggccaatgcgctgcagcgctggcacccgagtgacggctccgcccgcctcatcctc
caaccatggagagacgtgttcacgcccggtgcctgggaggccttcatggtcaaaaacata
atccctaaactagctctgtgtctgggggagctggtaataaatcctcaccagcagcagatg
gagccgttcaattgggtgttggactgggagggcatgctgtctccctctagcctcgtatca
ctgctggacaaacacttcttctccaagtggctacaggtgctgtgttcgtggctcagtaac
agtcctaactatgaggagattacaaagtggtacctgggctggaagtccatattcagtgat
gctgttctggctcagccactcgttaaggacaagttcaacgaagctctggacatcatgaac
cgcgctgtctcctctggcctcggtggggggtacatgcagcctggtgcccgtgagaacata
gcatacctcacacacacagagcgtcgtaaagacttccagtacgaggctctgcaggagcgc
cgggatgctgagagcgtggcgcagcgaggcatcggtgccagcttgcccaccaacttcaaa
gacctgatccagaccaaggctgaggagaacaacattgtcttcatgccgctggttgccaaa
cgccacgagggcaaacagctgtacacctttggacgtatcgtcatctacatagacagagga
gtggtcttcgtacagggagagaagacctgggtccctacatccctacagagtctcatagat
atggccaagtga
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