Oncorhynchus keta (chum salmon): 118393298
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Entry
118393298 CDS
T09424
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118393298
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118393298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118393298
03009 Ribosome biogenesis [BR:
oke03009
]
118393298
04131 Membrane trafficking [BR:
oke04131
]
118393298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118393298
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118393298
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118393298
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118393298
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118393298
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118393298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
nSTAND_NTPase5
IstB_IS21
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
118393298
NCBI-ProteinID:
XP_035641751
LinkDB
All DBs
Position
14:34941758..34951648
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDKEVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSNAAGG
SGPSQGTGGTGGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaatccaaaaatgatgacctttccactgcgattctgaagcagaag
accagaccaaacagattgattgtcgatgaatccatcaatgaggacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgttccgtggtgacacagtgctgatgaag
gggaagaagcgcagggagtctgtgtgtattgtcctgtctgacgacacctgctctgatgag
aaggtccgcatgaaccgtgtggtccgcaacaatctccgtgtccgtctgggggatgtcatc
agtatccagccgtgtcctgatgtaaagtatgggaagaggattcatgttctgcctattgat
gacacagtcgaagggatcactggcaacctgtttgaggtctacctcaaaccctatttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgggggggtatgcgtgcg
gtggagttcaaggtggtagagaccgaccccaacccctactgcatcgtcgccccagataca
gtcatccactgcgagggagagccaatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgatgatatcggaggagtgaggaagcagctagctcagatcaaggagatggtt
gagctgcctctcagacaccctgcactgttcaaggctataggagtcaagcccccccgtggt
atcctgctatacggacctcccggtacaggaaagaccctgattgccagagctgttgctaac
gagaccggagccttcttcttcctcatcaacggtcctgagattatgagtaagctggctggg
gagagtgagagcaacctgaggaaggcctttgaggaggctgagaagaactctcctgccatc
atcttcattgatgaactggatgctattgctcccaagagagagaagactcatggagaagtg
gagaggcgtatcgtgtctcagctgctgaccctgatggacgggctgaagcagagagctcat
gtcatcgtcatggcagccaccaacagacccaacagcatagatgctgcacttagaagattt
ggacgttttgacaaggaggtggacattggtatccccgatgctacaggcagactggagatc
ctgcagatccacaccaagaacatgaaactgaatgatgatgttgaccttgagcaggtggct
aatgagacccatggccacgtgggtgctgatctggctgccctgtgctcagaggctgctctc
caggccatcaggaagaagatggacctcatcgacctggaggacgagaccatcgatgcggag
gtcatgaactcccttgcagttaccatggatgactttaggtgggctctaagccagagtaac
ccatcagctctgagggagacagtggtggaggttcctaacatcacctggggggacatcgga
ggactggaagacgttaagcgggagctgcaggagctggtgcagtacccagtggagcaccca
gataagttcctgaagttcggtatgactccttcaaagggagtgttgttctacgggcctccg
ggttgcggtaagaccctgctggccaaggccattgccaacgagtgccaggccaacttcatc
tccattaaaggacctgagcttctcaccatgtggtttggagagtcagaggctaacgtcagg
gagatctttgacaaggctcgccaggcagccccatgtgtgttgttctttgacgagctggac
tccatagcgaaggcacgtggaggtaatgtgggagacggtggcggtgcggccgaccgtgtc
atcaaccagatcctgactgagatggacggcatgtccagcaagaagaacgtcttcatcatt
ggagccaccaatcgccctgacatcatcgaccctgccatcctccgacccggccgtctggac
cagctcatatacatccctttgcctgacgaaaagagcaggatcaatattctcaaggctaac
ctccggaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
gggttctcgggtgctgaccttacagagatctgccagcgggcctgtaagctggctatcaga
gagtgcattgagaacgagattcgccgagagagggagaggcagaccaacccctctgctatg
gaggtggaggaagatgaccctgtgcctgagatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgctctgtcagcgacaatgacatccgcaaatacgagatgtttgcccag
acactgcagcagagccgaggatttggcagcttcaggttcccctccaatgctgcagggggc
agcggtcccagccagggtactgggggcactggtggggggccagtgtttaatgaggataat
gatgatgacctgtacggatag
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integrated database retrieval system
