Oncorhynchus keta (chum salmon): 118393307
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Entry
118393307 CDS
T09424
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
oke03420
Nucleotide excision repair
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118393307 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
118393307 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118393307 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118393307 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118393307 (cdk7)
03019 Messenger RNA biogenesis [BR:
oke03019
]
118393307 (cdk7)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118393307 (cdk7)
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
118393307 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
118393307 (cdk7)
Protein kinases [BR:
oke01001
]
Serine/threonine kinases: CMGC group
CDK family
118393307 (cdk7)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118393307 (cdk7)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
118393307 (cdk7)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118393307 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
118393307
NCBI-ProteinID:
XP_035641764
LinkDB
All DBs
Position
14:35374943..35381542
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKMMYFSNRPA
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacaccatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacaggacagcccta
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
ttcgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggtg
atcatcaaagataccagtctggttttgactccagccaacatcaaagcattcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggtttagctaaa
gccttcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatcttgac
cagctgagtaagatctttgaagctctggggactccgacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcgtttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagacgacctcttagaactactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagatgatgtacttcagtaacagaccagct
ccgacccccgggcaccagctgccccggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga
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