Oncorhynchus keta (chum salmon): 118393442
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Entry
118393442 CDS
T09424
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118393442 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118393442 (fancc)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
118393442 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
118393442
NCBI-ProteinID:
XP_035642009
LinkDB
All DBs
Position
14:42102699..42139446
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AA seq
606 aa
AA seq
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MGFRSKTAQHFSPCCCPSPNRTMSQAQTGSMAGLKPQEVAFWLGKAVEWGQTESPDTQRD
TCLHLGPLRAFLQLLLTDIHMRSSTTETMRTIPFIGQFLGRLCWNPYVTVDAESRSLLLQ
SLWSLYSEEPHNAVERKANQWIRNVLCQLATEEENSATHMLVKHMGLPPKEYNVKVLRKM
VWLLVEEVGESCSSLADPNQRCSCDSVLAASVACVPLVTCPETAPLIGALLQRPVTCDKA
ALSQDFLDAVSSAYSRKCVSLEAQAVVSLWCHNLASLEGAVMSLLDSVLSNPAFILHNLQ
STITHSLLPKACSQHGSIFLIVNDIFRSMLVQVEGNQTLLSLIHTFTICFLRELAALQPQ
ECVSLKAFFPHTPQSLLAPLLTHPSEMAQEAWPEHLAWITASLQRLTEEEEEEEGNRGQC
GVFEAWFLLVQCADWLEVANQLLVSARPQDCGPLLWLLTFYHHPTNRGHHRTQQLVAARE
VWDHLRSLFLLSAPPLPADRLQSLAELMSAVPQQPSLDSLLVVSLLGNFAVFSHNPLSGA
REILRMVVQRSGLVREAVCVLDMVELRLNRERASSSLTDRVTLRTRALRGTLTHMAQHDT
HTHGTT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggggtttcggtctaagacggcccagcacttctctccttgctgctgccccagccccaat
agaaccatgtcccaggcccagacgggatccatggctggcctaaagccccaggaggtagcc
ttctggctaggaaaggcagtggagtggggccagactgagagcccagacacccagagagac
acctgccttcacctgggccctctcagggccttcctccagctcctcctcacagacatacac
atgcggagctccaccacagagaccatgaggactattcccttcataggccagttcctcggc
cgcctctgctggaacccctatgtcactgtggatgctgagagccgatcactcctgctccag
agtctgtggagtctgtattcagaggaacctcataacgctgttgagaggaaggccaaccag
tggatacggaacgtgttatgtcagcttgctacagaagaagagaacagtgcaacacatatg
ttagtgaaacatatgggcctgccaccaaaggaatacaatgtaaaggttctaagaaagatg
gtgtggttgctagtggaggaggttggggagagctgcagcagtttggctgaccctaaccag
aggtgttcgtgtgacagcgttcttgctgcatcagtggcatgtgtccccctggtcacatgt
cctgagactgctcctctcattggtgcgttgctgcagcggccggtgacctgcgataaggca
gccctcagccaggacttcctggatgctgtaagctccgcctactccagaaagtgtgtgtct
ctagaggcccaggcagtggtgtctctgtggtgccataacctggccagcctagagggggca
gtgatgtctctactggactctgtgctctccaacccagccttcatcctgcacaacctacag
agcaccatcactcactcactactgcctaaagcctgctcccagcacggctccatattctta
atagtgaacgacatcttcaggtccatgctggtgcaggtggagggaaaccagactctgcta
tctcttatccacaccttcaccatctgcttcctcagggaactggcagccctgcagcctcag
gagtgtgtgtccttgaaggccttcttcccacacacaccccagagcttactggcccctctg
ctgacccatccttcagaaatggcccaggaggcgtggccagaacacctggcctggatcact
gcatcactacagagactcactgaggaagaggaggaagaggaaggcaacaggggtcagtgt
ggagtgtttgaggcctggttcctgctggtgcagtgtgctgactggttggaggtagccaac
caactactggtctcagccagacctcaggactgtggccccttgctgtggctcctcaccttc
tatcaccacccgaccaacagggggcaccaccggacacagcagctggtggcggccagagaa
gtctgggatcacctgaggtcactcttcctgctctcggctcctccccttcctgctgaccga
ctgcagtcattggccgagctgatgtcagccgtcccccagcagccgtccctggactcgcta
ttggtcgtcagcctcctgggcaactttgcagttttctcccacaaccccctgagtggtgcc
agggagatactccgcatggtggtgcagcggtcagggctggtccgtgaggcagtgtgtgtt
ctcgacatggttgagctccgactaaacagagagagagcctcctccagcctcactgacaga
gttacgctcaggaccagggctcttcggggcacactcacacacatggcacagcacgacaca
cacacacatggtacaacatga
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