Oncorhynchus keta (chum salmon): 118393641
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Entry
118393641 CDS
T09424
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118393641
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
118393641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
eIF2A
Beta-prop_RIG_1st
WDR54
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
PROPPIN
WD_LRWD1
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
RMC1_N
Beta-prop_IFT122_2nd
Ge1_WD40
Beta-prop_WDR11_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
118393641
NCBI-ProteinID:
XP_035642408
LinkDB
All DBs
Position
14:complement(56659433..56669256)
Genome browser
AA seq
700 aa
AA seq
DB search
MAVANTTKTSWRLQEIVAHSSNVVCLALGKNSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHNNPVECVKFNNSEEQVVAGSQSGSLRVWDLEAAKILRTLMGHKANICSLDFHPFGEYL
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTAHTGAINIIQFHPNEYLLASGSSDRTIKLWDLEKFKMIGSSEGEMGPVRCLAFN
LDGCCLYSGAVDSLRVYGWEPNRCFDVVPVGWGKVADLAICNHQLIGVSYNLTNVSSYVV
DLTRVKKSGSVIQGVIQDDQPLTEPSPKGSTLRRNYDRPLTTCSTQRVKQSSESDRRSPE
GERRSPSSEDEKESSAEIRNPEDYKEIFQPKSAISRTPPKSEPFPAPLEDESFVVRANQG
LVEFMTPMTDRQQPGLLLNLPVASSTPVLRVEPTMVATAPRPIPVVTTRPPTSNHPPAPH
PAPPLVIAMAKAKPQPSVILSTRNEPIGLNVGDFLPPARNNRPSALGDDEALAQIRKGHD
TMCVMLTSRHKNLDTIRAVWGSGDVKTSLDSAVSMKDLSIVVDILNIVNLKPSLWKLDLC
TSILPQIEELLQSKYESYVQTGCTSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKC
KACYKQLKNLSNVVKNKADQVGRHGSAFKELQLLLAPLDY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccaacaccaccaaaacatcatggcgattacaggagattgtagcccactcc
agtaatgtggtgtgtctggcactggggaagaactcaggccgtctgctagccactggggga
gaggactgccgagtcaacatctgggcagtcagcaaacccaactgcatcatgagtctgaca
ggacataataacccagtggagtgtgtaaagtttaataactctgaggagcaggtggtggct
ggctcacagtccggatcactgcgcgtatgggacctggaggctgcaaagatcctaagaact
ctaatgggacacaaggctaatatctgcagcttggacttccacccatttggggaatacctg
gcatctggttccatggacaccaacatcaagctgtgggatgtacggagaaagggctgtgtg
ttcaggtacaagggtcacactcaggcagtgaggtgcctggccttcagtccagatgggaaa
tggttggcctctgctagtgatgacagcaccatcaagctgtgggacctgactgcagggaag
atgatcacagagttcacagcacacactggagccatcaacatcatccagttccaccccaac
gagtatctgctagcgtcaggcagctctgaccggaccatcaaactgtgggatctggaaaag
ttcaagatgattggctcttcagagggagagatgggaccagtcaggtgtctggcctttaac
ctggatggctgctgtctgtatagtggagctgtggactctctccgtgtgtatggctgggag
cccaaccgctgctttgatgtggtgccagtgggctggggcaaggtggcagacctggctatc
tgcaaccaccagctgattggcgtgtcgtacaatctgactaatgtttcgtcctacgtggtg
gatttgacgcgggtgaagaagtctggctctgtgatccaaggcgtaatccaggacgaccag
ccactcacagagccctccccgaaaggatccacgctgcgacgcaactacgaccgacccctg
accacctgcagcacacagagggtaaagcagagttctgagtcagaccgccgcagccccgag
ggggagaggaggagccccagtagcgaggacgagaaggagtcctccgccgagatccgtaac
cctgaggactacaaagagatcttccagccaaagagcgccatctctcgcacccccccaaag
agtgagcccttccctgcccccttggaagatgagagttttgtggtgagggctaaccagggg
ctggtggagttcatgactcctatgactgacagacagcagcccggcctgttgttaaacctt
cctgtggcatcgtccactccggtcctgagggtggagcctaccatggtcgccacggcgccc
cgtcccatccccgtggtaaccacacgacctccgacctctaaccacccccccgcaccccac
ccagcccccccactggtcattgctatggcgaaggccaaaccccagcccagcgtcatcctc
tccaccaggaatgaaccgataggactcaacgtgggagatttcctgcctcctgctcgcaac
aaccggcccagtgcgctgggtgatgacgaggctctggcccagatcagaaagggccatgac
accatgtgtgtgatgctcaccagccgacacaagaacctggacaccatcagagctgtgtgg
ggcagcggggacgttaagacctccttggactcggccgtctcgatgaaggatctctctatc
gtcgtggacatcctcaacatcgttaacctcaaaccgtctctatggaaactggacttgtgt
acctctatcctgccccagattgaagagctgctgcaaagcaagtatgagagttacgtgcag
acgggttgcacctctctgaagctgatcctgaagcgtttctggcctctcatctcagacacg
ctgacagcgcccccctctgttggagtggatataacacgggaggaacgccaccagaagtgc
aaggcatgctacaagcagctgaagaacctcagcaacgtggtgaagaacaaggccgaccag
gtgggacgccacggcagcgccttcaaagagctgcagctgctcctggccccactggactac
tga
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