Oncorhynchus keta (chum salmon): 118393780
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Entry
118393780 CDS
T09424
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecule (CAM) interaction
oke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118393780
04519 Cadherin signaling
118393780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118393780
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Major cadherins
118393780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
118393780
NCBI-ProteinID:
XP_035642726
LinkDB
All DBs
Position
2:65215558..65240333
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AA seq
811 aa
AA seq
DB search
MLAQEMTSRGLAVLCVLVAGLGQVRSSSQAGREDLNPVVLYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIP
LDREKNRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVSEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPPLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLTLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDQYTMSAVENKVDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVVKALDYETQEVYTLTLTV
ENVNPLSIKAPKDPVSSATVVVTVVNENEAPRFNKDPIEIVVLESVDPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLRETNDFFPQLFPLMGTVCSESGRETSGLFLTAVDEDLPPHAEPFTFQLQDIN
VSANWTIIQVNETHAVLRPLVELETGEYSVTVLVTDSGTPSLGAYAQVNVTVCLCGKNGE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGESD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPVDVGPLPISYYPPITGIPRGKQPLRKDYP
DNLPSPSYPRKPPADPTDIEDFINDGLEAADHDPNVPPYDTALIYDYESDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaggagatgacatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcaggagcagcagccaagcgggcagggaggaccttaacccagtggtcctg
tatccatggagacagaggagcagcggaggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagtaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcaccggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaaggacctgtttgagatagatgataaaacgggctggatcaggagcatgattccc
ctggacagagagaaaaacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccattgagattgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttctgaattctccgtaccaggcaca
tctgtgatgtctgtgactgcaactgatgctgacgacccaaccacagacaacgctatcttg
agctactccatcattggccaggagagcatcccgcctctccgcatcaataagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggcctagactgggaggtg
gttaaaggttttaggttgacactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgccaatgcagtcatacatgtgactgacatcaacaacaatcccccacgattctcccca
gaccagtacactatgtcagctgtggagaacaaagtagacttcgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagaccaaatacactatcgccaag
ggcaacccctccaggaactttgccattcgcacagaccctgtgaccaacgagggtattctg
tcagtggtgaaggctctggactacgagacccaggaggtgtatactttgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaaggaccccgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgcttcaataaagaccccatagagatt
gtggttcttgagtctgtggaccctggcaccgtgctggccagtaacattgcctacgatcct
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccattcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctggtgatcacgttgcgggagaccaatgacttcttccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccgggagacatctggtctgttcctgactgct
gtggatgaggacctgccccctcatgctgaacccttcaccttccaactgcaagacatcaat
gtgtctgccaactggaccatcatacaggtcaacgagactcatgcagtgctgcgacccctg
gtagagctggagacaggggaatattctgtcactgtgttggtgactgactctggcacccct
agtctcggtgcatatgctcaggtcaatgtgactgtgtgtctgtgtgggaaaaacggtgaa
tgtaagaccgaagctgctgccatattcggaacacgagttggtgtcagtttcatcgcctta
ctggtcatcatggccagcattgcactcctgctattgctgctgctcctggctgtagccgtg
ggtaactgcagacggcatcatatgaagaaaggagaggggctgctggtgggagagtcagac
gaagacatccgtgacaatgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacattgacctactgaggaacccagtggatgtgggaccactcccaatatcc
tactaccctcccatcactggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggaccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacgtccctccctacgac
acagctctgatctatgactacgagagtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactgggggccacgc
tttaagaaactggccaacatgtacgacccacgctaa
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