Oncorhynchus keta (chum salmon): 118393833
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Entry
118393833 CDS
T09424
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118393833
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
118393833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
118393833
NCBI-ProteinID:
XP_035642841
LinkDB
All DBs
Position
14:67136871..67149401
Genome browser
AA seq
1154 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKRKGGGRRKKGGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKKRRRPNKGGDDGS
DDEEGGSRPKKQRKPRAGGKKFQRAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDR
NPRDSGSGSDNEGSHKKCIASDSESDRGRNRSGSDAGSPQRSENSGSDSGSERPVKRKRV
QQQSDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPAGSPAGSPRRSDNGSEPGGS
ANEASNHGSGSDSD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttcaattgaaatccccttaagggacaccgacgaggttattgagcttgat
ttcgaccagttgccagaaggagatgaggtcatcagtatcctgaaacaggagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacagaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctggactacagagaccatgagaag
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcattatgtacgaccagaaccacttgttgggaagagcctgtttctgtctgctg
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaatcagtccacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaagaaggctctacgcacaaaccctggatgtcctgccgaagtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggccgggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagctcttatccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagctatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccagtttgcctcgtctaccttt
gtgctgcctttctttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgctttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggctctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgtggaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccacccgcatt
ctgcaggagaaggtccaggctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcttctttggagcgg
gccaaagctgagggagagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctacgaggccatgtgcgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgttgactgttacctgcgtcttggcgcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccaggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggccctaggcaacgtgtggctccagaccctgcaccagcccactagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaacctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactaccgagaggcccgtgacgtgtttgcccaggtgagagaagccacagctgatatc
agcgacgtctggctcaacctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtggtg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcgcgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggacgagaagagtaatctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggctggt
gacaagatgaggttcgacctagtgcttgcttccactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggatgaggaggagaaggag
atccgggccaaacaggatcaggagagggacttcctgcgccaacagatgcataaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tatgtggagaagaccaagggtctgctctccttcgccgatggaatgaaggaggaaaggaaa
gagaagaggaaaggtggcggccgacgcaagaaagggggtgactttgatgagtttgtcaac
gatggctctgatgaggacttgccagtgagaaggaggaagaagaggaagggtggcagcgga
agtgaggaggagggccgcaagaagaggaggagacccaacaaagggggtgacgatggcagc
gatgacgaggaaggaggctcacggcccaaaaagcaacgcaaacccagagcgggcggcaag
aagttccaaagggccgagcctgtgccaccgtctctcaaaggcaagatcaagtcaaaggcc
atcatctcatcctctgactcttcatcagacgaggatggactgaaaattgctgaagaccga
aaccccagagacagtggttcaggctctgataatgagggcagccacaagaagtgcatcgcc
tccgacagtgagtccgacaggggccggaaccgctctggcagcgacgctggaagcccccaa
cgctccgaaaactctggtagcgactcaggcagcgaacgtccagtgaagaggaagagagtg
cagcagcagtctgactcagagcagtctgataacgagagcaagaggagccgctctgggtcg
gagaacgagtcccggccaggctcaccggccgcagcctctggctctgaagcgggctctccg
gcgggctccccggcaggctccccacgccgctccgacaatggatcagaaccagggggctct
gccaacgaggcctccaaccacggctctggctctgacagcgactga
DBGET
integrated database retrieval system
