Oncorhynchus keta (chum salmon): 118393988
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Entry
118393988 CDS
T09424
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118393988
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118393988
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
EC042_2821
Motif
Other DBs
NCBI-GeneID:
118393988
NCBI-ProteinID:
XP_035643150
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All DBs
Position
14:74477726..74489034
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AA seq
720 aa
AA seq
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MRLNGQCSADSLTAHKGLAIYPLFPVPRRLQLLSWLMMPSATVGHNAVQSSSPELGSGTQ
SEAMKQVLQVIDKKVRNMEKKKGKLDDYQAKKNKGERLNQDQLDALTKFQEVTNNLDFAR
ELQKSFLSLGQEIQKAVKKSARREQLQREETEQRRLKTVLELQFLLDRLGDEQTRQDLKQ
PAAGSPLLTDYNLTALDSFYKLVGPERDHDVRLTDQYEEASLHLWELLEGRDQAVAGTTY
KALKETLDKVLLSGYFDSAQTHQNGVCEKEEEEEEEEEEEEEEQQEQSVAHELSGGGEQP
AAPEGIVTEEYTEAIEVEATEFVNRQFIPETTYSSTGIDQVEEWTAEVQVVNVLQHQPPP
QMTPEPHTVNPVSHTPDPVVRKQVVQDLMAQMQGTYNFMQDSMLEFDGHALDPAIVLAQP
MKPAQSVDLQQMVHSESRLAQPSSVPESTQVLMVSPTPDAYSSTAPLYQPSHTAEPRPQT
DGIDHIQASMSLSSEQSPAPSSLPSAFPPVSTPHSGGINVNAAPFQSMQAVFNLNAPVPP
TNEADGLKQFPSGYGQGFSSQAEHSVEEPDIQQDTLQSAVGGFHTQDQVMSSAAGHQVQG
PGFGRQGQSFYNSRGAVSRGGPRNPRGMINGYRGSSNGFRGGYDGYRPPFSNTPNNGYGQ
QAQFSTAPRDYSNSTYQREGYQPGYKRGAAQGPRGCSRGRGGLFKPSRGMVTQLSGHQAN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaatggacaatgctcggctgacagtctcacggctcacaaaggacttgcaatt
tatccactttttcctgtgcctcgccggcttcagcttcttagttggcttatgatgccttca
gcaacagttggccacaatgctgttcagtcctccagcccagagttgggttctgggacccag
tctgaggccatgaagcaggtcctgcaggtgatagacaagaaggtccgcaacatggaaaag
aaaaagggcaagctggatgactaccaggccaagaagaataaaggagaacggttgaaccag
gatcagctggatgccttgactaagttccaggaagtgaccaacaacctggattttgcaagg
gagttgcagaagagcttcctgtctttggggcaggagattcagaaagcagtgaagaagtct
gcccggagggagcagcttcagcgggaggagacggagcagaggcgtctgaagactgttctg
gagctgcagttcctgcttgaccgactgggcgatgagcagacgaggcaggacctgaaacag
cccgctgcaggctcccccctgctcaccgactataacctcaccgcactggacagtttctac
aagctcgtgggcccggaacgggaccatgacgtcaggttgactgaccagtatgaggaggcc
tccctacacctatgggaactgctagagggcagagaccaggctgtggcaggaaccacatac
aaggcactgaaggagaccctggacaaggtgctgctgagtggctattttgatagcgcacaa
acgcatcagaacggagtgtgtgaaaaagaggaggaagaggaggaggaggaagaagaagag
gaggaggagcagcaggagcagtctgtggcgcatgagttgtctgggggcggggagcagcct
gcggcaccagagggaatagttactgaagaatacacagaggccattgaagtagaagccaca
gagtttgtaaacagacagttcattccagaaaccacatacagcagcactggcatcgaccaa
gtagaggagtggacagcagaggtccaggtggtcaatgtcctccagcaccagcctcctccc
cagatgacccctgagcctcacactgtgaacccagtctcccacacgcctgaccctgtggtc
cggaagcaggtcgtacaggacctcatggcccagatgcaggggacctataacttcatgcag
gactccatgttggagtttgatggccatgccctggacccagccatcgtgttggcgcagccc
atgaagcctgcacagagcgtggacctgcagcagatggttcattcagaatccagacttgct
caaccaagctcagttcctgaatctacacaagtcctcatggtctcccccacacctgatgcc
tactcctccacagcgcctctctaccagccctcccacacagcagagccccggccacagacc
gacggcatcgaccacatccaggcctcgatgtccctgtcgtctgagcagtcccccgccccg
tcctccttgccctctgccttcccgcccgtctccaccccccacagcggcggcatcaatgtc
aacgcagcaccattccagtccatgcaagcggtgttcaacctgaatgcccccgtgcccccc
actaacgaagcagacggtctgaagcagttccccagtggctacggccagggcttcagtagc
caggcggagcactccgtggaggagcctgacatccagcaggacactctacagtccgctgta
ggaggcttccacacccaagaccaagtgatgtcgtcggcagcgggccaccaggtgcagggg
ccaggctttgggcggcaaggccagtccttctataacagcaggggggccgtgtctcgcgga
ggccccaggaacccccggggcatgatcaatggataccgaggatcctctaacggtttcaga
ggaggatatgatggctatcgccctcccttctcgaacaccccaaacaatggttatgggcaa
caggcccagttcagcactgcaccccgggactactccaacagcacctaccaacgggaggga
tatcagccaggctacaagcggggagcagcccagggacctcggggttgctctcgaggccgg
gggggactgttcaagcccagccgagggatggtgacccaactgtctggacatcaagccaat
tag
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integrated database retrieval system