Oncorhynchus keta (chum salmon): 118394002
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Entry
118394002 CDS
T09424
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118394002 (top3b)
03460 Fanconi anemia pathway
118394002 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118394002 (top3b)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118394002 (top3b)
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118394002 (top3b)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Topoisomerases
118394002 (top3b)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118394002 (top3b)
FA (Fanconi anemia) pathway
118394002 (top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
118394002
NCBI-ProteinID:
XP_052316916
LinkDB
All DBs
Position
14:complement(8183910..8212573)
Genome browser
AA seq
857 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYMGTFSGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFTKAPTEKKEANPKLNMVKFLQVEGKGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNRPYGSERTVYRAKFSSITDTDIWAAMNKLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKGKESPLTLDWDRVRVFDREVGQMFVNMTKTSREAKVESVSKKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETNHYHDNFDLKGTLRQQANN
PFWAQEVKALLSEGLNRPRKGADAGDHPPITPMRAASEGELGSDGWRLYEYIVRHFIATV
SQDCKYLQTTISFTIASESFSCSGKTLISPGFTEVMPWLGIPLEEAMPVCERGDVFTVEE
IKLVERQTSPPDYLTEADLITLMEKHGIGTDASIPVHINNISQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRGAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFFDTI
ASMDELMEVTFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCAGCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECEGGVLVLDPTSGPKWKMACNRCNVMVHFFEHAHRVQVTQESCEACEASLVA
VDFNKTRSPLPDGETQHSGCVFCDPVFQDLVELKHATMRHPSMTRGGGARRGGRGRGRGR
REKKPKDKMAALAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttttgatggtggcggagaagccgtcgttggctcagtcaattgccaaaatc
ctatctaaaggcagctgctccagtcgtaaaggtctcaacggagcatgttcggtccacgag
tacatgggcactttctcaggccagagcgtgcgctttaagatgacatcagtgtgtgggcac
gtgatgagtttggatttcatagggaagtataataactgggacaaggtggatccagctgaa
ctcttcactaaagcccctactgagaagaaggaggccaaccccaaactcaacatggtcaag
ttcctacaggttgaaggcaagggatgtgactacgtggttttgtggttggactgcgacaaa
gagggagagaacatctgctttgaggtcctggacgccattgagccggtgatgaaccgtccg
tacggcagtgaacggaccgtctaccgagccaagttcagctccatcaccgacaccgacatc
tgggcagccatgaataagctgggagagcccaaccgtaacgaagctctgtccgtagacgcc
cggcaggagctggacctgcgcattggctgtgcattcacccgcttccagaccaagtacttc
cagggtaaatatggtaacctggactcatccctgatctcctttgggccatgtcagaccccc
acactgggcttctgtgtggagcgccacgacaagatccagtccttcaaaccagagacctac
tgggtcatacaggctaaggttttcaaagggaaagagtctcctctgactctggactgggac
agggtgagggtctttgacagagaggtgggacagatgtttgtcaacatgactaagacctcc
agagaggccaaggtggagtcggtgagtaagaaggagaaggccaagcagagacctctggcc
ttgaacaccgtggagatgcttcgagtggccagctcctctctaggaatgggtccacagcac
accatgcagatagcagagcgtctgtacacccagggttatatcagctacccccgtactgag
accaaccactaccacgacaactttgacctgaaggggacactcagacagcaggctaacaac
cccttctgggctcaggaggtgaaggctctgctgtcagaggggctgaaccgtcccaggaaa
ggagctgacgcaggagatcaccctcccatcacccccatgagggctgcctccgaaggagag
ctaggaagtgacgggtggcgtctgtatgagtacatcgtgcgtcacttcatcgccacggtg
agccaggactgtaagtacctgcagacaaccatctccttcaccatcgcctccgagagtttc
tcctgcagtgggaagacactcatatcgcctggctttacggaggtgatgccgtggctgggt
atccctctagaggaggccatgccagtgtgtgagaggggagatgtcttcactgtggaggag
attaaactagtggagaggcagaccagccctccagattaccttactgaggccgacctcatc
acactgatggagaaacacggcataggtactgacgccagtatcccggttcatatcaacaac
atctctcagaggaattatgtgacggtggagaacggacgcaagctcaaacccaccaacctg
ggcatcgtcctggtgcatggatattacaagacagatgctgagctggtgctgcctaccatc
cgtggtgcggtagagaaacagctgaacctgattgctcagggcaaggccaactaccaacag
gttctgcaacacacactggacatcttcaagaggaagttccactacttctttgacaccatc
gctagtatggacgagctcatggaggtgacgttctctcccatcgctgccaccggcaagccc
ctgtctcgctgcggcaagtgccatcgctttatgaagtacattcaggccaagcccagccgg
ctgcactgtgctgggtgtgatgagacgtacagcctccctcagaacggagccatcaaactg
tacaaggagctgcgctgcccactggatgagtttgagctggtgctgtggacctctggatcc
aggggaaagagctaccccctttgtccctactgcttcagcaacccccccttcagggacatg
aagaaaggtatgggatgtaatgagtgcacccacccgtcctgccagcacagtctcaactcc
ctgggtattggtcagtgtgtggagtgtgagggcggggtgctggttttggaccctacctct
ggccccaagtggaagatggcttgcaacaggtgcaacgtgatggtgcacttctttgaacac
gcacacagggtgcaggtaacccaggagagctgtgaggcatgtgaagcgtccctggtagcg
gtggacttcaacaagacgcgctccccgctgcccgacggagagacgcagcacagcggctgt
gtgttctgcgacccagtcttccaggacctggttgaactcaaacacgccaccatgagacac
ccctccatgacccgcggcgggggtgcacggcgtggggggcggggcaggggcagagggcgc
agggaaaagaaacctaaagacaagatggctgccttggcagcgtactttgtgtag
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