KEGG   Oncorhynchus keta (chum salmon): 118394016
Entry
118394016         CDS       T09424                                 
Name
(RefSeq) ubiquilin-1-like isoform X1
  KO
K04523  ubiquilin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118394016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118394016
   03051 Proteasome [BR:oke03051]
    118394016
Membrane trafficking [BR:oke04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    118394016
Proteasome [BR:oke03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    118394016
SSDB
Motif
Pfam: UBQLN1 ubiquitin STI1-HOP_DP UBA Ubiquitin_5 UBA_7 Rad60-SLD YukD Dsc3_N DNA_pol_phi Rad60-SLD_2 CUE UN_NPL4 UBA_HOIP
Other DBs
NCBI-GeneID: 118394016
NCBI-ProteinID: XP_052317102
LinkDB
Position
14:complement(14123957..14133387)
AA seq 568 aa
MANNVDEDEQQPFPAECKIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQTEQLV
LIFAGKILKDADLLSHQGIYNGLTVHLVIKTQSRPPELSTSPSNSTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGLGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPNITHLFNNPDVMRQTLEIARNPTIMQEMLR
NQDRALRNNALRRMSTDAQGPMLNAAAQELIAGNPFASLTTSSPGEIQSPRVENGDPLAN
PWVPPASTDTPIGTATPTTTPTLSSNGPQTSLHNLGPPMGGRTSNSAAMFNSPGMQSLLQ
QITENPTLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPMFL
QQMQNPEMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGQGGAGSDLNPAPGLSSD
PAPSDLSSGSQEVTETGQRQQQQFVRQMLDALASTNQQAQTEELLFQEQVEQLTTMGFLN
PEANLQALIATGGDVNAAVERLLDSPSL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctaataatgtggatgaggacgagcaacaaccattccctgctgaatgtaagatcatc
agagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaacagagcagctggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatctac
aacggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtctacc
tctccttccaacagcactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcccgcttcttcagccacc
cctaccttcagccttggtctaggcagtccagggacagctgctgcggggcctggtctcgct
gaactgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctgctgcagcacaaccccaacatcacccacctgttcaacaaccctgac
gtcatgagacagaccctggagatagcacggaacccgaccataatgcaggagatgttgcgc
aaccaggacagggcactaagaaacaatgccctccgcaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaactgattgcaggaaacccttttgcttctctgacg
acctcgtcaccaggggaaatccagtccccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacacccctataggcaccgccacacccaccactacc
cccaccctgtccagcaatggccctcagaccagcctgcacaacctaggtccccccatggga
ggtagaacatccaacagtgcagctatgttcaatagtccgggaatgcagagtcttctgcag
cagatcacggagaaccccacactgatgcacaacatgctgtcagccccctacatgaggagc
ctactcaacagcctgagccagaaccctgacctagcagcacagatgatgctgaacaaccca
ctgttttctgggaaccctcaactgcagcagcaaatgagacaacaactcccaatgttcctc
caacagatgcagaaccctgagatgctgtcggccatgtccaaccccagggccatgcaggca
ctgctgcagatccaacagggactgcagacccttgccactgaggcacctggattcatacca
ggggttggacagggaggcgccggctcagatcttaaccctgcccctggattgtcatcagac
cccgcccctagtgacctcagcagtgggtcccaggaagtcacggaaacgggtcagcggcaa
caacaacagtttgtgcgtcagatgctagatgctctcgctagcaccaatcagcaggctcag
actgaagagctgctgttccaggagcaggtggagcagctgacgaccatgggtttcctcaac
ccagaggccaacctgcaggccctcatcgctaccgggggagacgtcaacgccgctgtagaa
cgactgctggactcgccatccttgtaa

DBGET integrated database retrieval system