Oncorhynchus keta (chum salmon): 118394016
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Entry
118394016 CDS
T09424
Name
(RefSeq) ubiquilin-1-like isoform X1
KO
K04523
ubiquilin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118394016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118394016
03051 Proteasome [BR:
oke03051
]
118394016
Membrane trafficking [BR:
oke04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
118394016
Proteasome [BR:
oke03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118394016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Ubiquitin_5
UBA_7
Rad60-SLD
YukD
Dsc3_N
DNA_pol_phi
Rad60-SLD_2
CUE
UN_NPL4
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
118394016
NCBI-ProteinID:
XP_052317102
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Position
14:complement(14123957..14133387)
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AA seq
568 aa
AA seq
DB search
MANNVDEDEQQPFPAECKIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQTEQLV
LIFAGKILKDADLLSHQGIYNGLTVHLVIKTQSRPPELSTSPSNSTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGLGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPNITHLFNNPDVMRQTLEIARNPTIMQEMLR
NQDRALRNNALRRMSTDAQGPMLNAAAQELIAGNPFASLTTSSPGEIQSPRVENGDPLAN
PWVPPASTDTPIGTATPTTTPTLSSNGPQTSLHNLGPPMGGRTSNSAAMFNSPGMQSLLQ
QITENPTLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQQMRQQLPMFL
QQMQNPEMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGQGGAGSDLNPAPGLSSD
PAPSDLSSGSQEVTETGQRQQQQFVRQMLDALASTNQQAQTEELLFQEQVEQLTTMGFLN
PEANLQALIATGGDVNAAVERLLDSPSL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctaataatgtggatgaggacgagcaacaaccattccctgctgaatgtaagatcatc
agagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaacagagcagctggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatctac
aacggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtctacc
tctccttccaacagcactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcccgcttcttcagccacc
cctaccttcagccttggtctaggcagtccagggacagctgctgcggggcctggtctcgct
gaactgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctgctgcagcacaaccccaacatcacccacctgttcaacaaccctgac
gtcatgagacagaccctggagatagcacggaacccgaccataatgcaggagatgttgcgc
aaccaggacagggcactaagaaacaatgccctccgcaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaactgattgcaggaaacccttttgcttctctgacg
acctcgtcaccaggggaaatccagtccccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacacccctataggcaccgccacacccaccactacc
cccaccctgtccagcaatggccctcagaccagcctgcacaacctaggtccccccatggga
ggtagaacatccaacagtgcagctatgttcaatagtccgggaatgcagagtcttctgcag
cagatcacggagaaccccacactgatgcacaacatgctgtcagccccctacatgaggagc
ctactcaacagcctgagccagaaccctgacctagcagcacagatgatgctgaacaaccca
ctgttttctgggaaccctcaactgcagcagcaaatgagacaacaactcccaatgttcctc
caacagatgcagaaccctgagatgctgtcggccatgtccaaccccagggccatgcaggca
ctgctgcagatccaacagggactgcagacccttgccactgaggcacctggattcatacca
ggggttggacagggaggcgccggctcagatcttaaccctgcccctggattgtcatcagac
cccgcccctagtgacctcagcagtgggtcccaggaagtcacggaaacgggtcagcggcaa
caacaacagtttgtgcgtcagatgctagatgctctcgctagcaccaatcagcaggctcag
actgaagagctgctgttccaggagcaggtggagcagctgacgaccatgggtttcctcaac
ccagaggccaacctgcaggccctcatcgctaccgggggagacgtcaacgccgctgtagaa
cgactgctggactcgccatccttgtaa
DBGET
integrated database retrieval system