Oncorhynchus keta (chum salmon): 118394020
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Entry
118394020 CDS
T09424
Symbol
gtpbp3
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA modification GTPase GTPBP3, mitochondrial
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118394020 (gtpbp3)
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
118394020 (gtpbp3)
Prokaryotic type
Methyltransferases
118394020 (gtpbp3)
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GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
cobW
DO-GTPase2
FtsK_SpoIIIE
ABC_tran
SRPRB
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
118394020
NCBI-ProteinID:
XP_052320300
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Position
1:89314696..89353406
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AA seq
513 aa
AA seq
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MLPCSWGLWRSAIHTLKTFSRASPSARGLCIPTRAVCDAETIFALSSGHGRCGVAVVRVS
GPASSMVLRNMAGLNKPLPPPRTALLRRITDPQSKELLDRGLVLWFKGPHSFTGEDSAEF
HIHGGPAVITAVLQALGSLEGVRPAEAGEFTRRAFXRGKLGLTEVEGLGDLIHAETEAQR
RQALRQMDGELGRLYQDWSYRLKRCLAHVEAFIDFSEDELIEDGVLNQVDSSVRQLETEI
ERHLKDERRGERLRTGVQVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGTTRDIVETSLD
IGGFPVLLSDTAGLRDSSDSVEREGVRRARQRVEQADLTLVVVDSTQLPPDPHLVAAFLQ
EHLSTVLPSPEAGMAAASDRVLLVLNKSDLVPEGQRERTEGELRERPGLPPACFLSCSTS
TGLEDFLTVLQSRVKTLCGDPLSGAPSLTQARHRAHLQQSVQALNQYHQYRDQDLALAAE
GVRLALTHLGRITGRVGAEEILDIIFRDFCIGK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttgccatgctcttggggattgtggagaagcgctattcacaccctcaagacattcagc
agagcatctccatcagcgaggggcctgtgtatcccgaccagagcggtatgtgatgctgag
accatctttgccctgtcgtcgggccacggcaggtgtggtgtggcggtggtccgtgtcagt
ggtcctgcctcctccatggttctgagaaacatggcaggtctgaacaagcctctaccccct
ccccgtaccgccctgctacggaggatcactgacccccagtccaaagagctgctggaccga
ggactggtcctctggttcaaaggtccccacagcttcacaggggaagacagtgcagagttt
catattcacggaggtcctgcagtcatcacagctgtcttacaagccctaggaagcctggag
ggtgtgaggcctgcggaggcaggggagttcacgcggagggccttcncacgcgggaaactg
ggcttgacggaggtggagggcctgggggacctgatccacgctgagactgaggcccagagg
aggcaggccctcaggcagatggatggggagctgggccgcctctaccaggactggagttac
aggctcaaacggtgtttggctcacgtggaagccttcatagacttcagtgaagatgagctc
atcgaggacggggtgttaaatcaagtggacagttcagtgcgccagctggagacagagata
gagagacacctaaaggacgagaggagaggagagcggctgcgcaccggagtacaggtggtg
atagcaggagctaccaatgctgggaagagcagtctgctcaacacgctctgccagcgtcca
gcagccatcgtgtcccccatcgcgggcaccaccagggacattgtggaaacctctctggac
attgggggcttccctgtcctcctgagtgacaccgcagggctcagagactcctcggacagc
gtggagagagagggggtccgtagagcccgccagagggtggagcaggctgatctgacccta
gtagtggtggactccacccagctacccccagaccctcatctagtagcagccttcctccag
gagcacctcagcactgtgctgcccagccctgaggccggcatggcggctgcctcagacagg
gtcctgctggtgctcaacaagagtgatctggtacctgaggggcagagggaaagaacagag
ggagagctgagagagagaccgggtctccctcctgcatgttttctgtcctgctctaccagt
acaggcctggaggattttctcactgtgctgcagagcagggtcaagactctgtgtggcgac
cctctgagcggagctcccagtctgacccaggcccgtcacagagcccacctccagcagagt
gtccaggccctgaaccagtaccaccagtacagagaccaagacctggccctggccgcagag
ggggtccgcctcgccctcacccacctgggacgcattacaggacgggtcggagccgaggag
atcctggacatcatattcagagacttctgtatagggaaataa
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