Oncorhynchus keta (chum salmon): 118394104
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Entry
118394104 CDS
T09424
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118394104 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118394104 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118394104 (abca2)
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118394104 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
118394104
NCBI-ProteinID:
XP_052317777
LinkDB
All DBs
Position
14:complement(44968202..45073648)
Genome browser
AA seq
2542 aa
AA seq
DB search
MGFLHQLQLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIREVVLQNHLFTADRPGLGQEL
ESLQQHLESLSTSAGPYPLDNNFNTSQGFTVANVLKNQSVFHQFLVRNLSLPNDTASLLL
STPVNLKEVFNLIFGLYPRTGGGSSHSSGGEKETTHTPAEKILQLEEKMLGVMQSLDGGL
IHKALRDPTKAAHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLEMLTCG
EDGTSELSKILLVPEKQQSLLQAYHSAACGGGMGQRTERFGEMSQELREQIDTQSLIDKL
RLEPANSSAPLSQSHLGALLKDLADVEKLLRDVDLLSGLARLLPKGACAGHIPPGAPANT
TTSWSLNATTWGPNTTENPWEEGGEEGRGREKENVKEENPHSFSTFVQLWAGLQPILCGN
NRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKANETF
AFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWMQQLTSDLRGHPELLNGTDSDLLRG
LLEGNYTLPNTSTLLEQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQAYHD
NISVFASVIFQTNLDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFLYGF
VWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSV
AMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLLH
SDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREEVAH
DKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGLSMMML
IIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWECPWGGGARLSVME
EDQACAMEHRRSGRAKPDLGLEEMRGIEEEPSHLPLVVCIDKLTKVYKMGNKLALNKLSL
NLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQH
NVLFDKLSVEEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKLS
VAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIA
IISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPQPPSTVSPSSSLSPSSSS
LSPCSETRVTQFIRQFVGSCLLLSDSNTELSYVLPSEAVKKGCFERLFQALEQNLAILAL
TSFGVMDTTLEEVFLKVSEEDQSLENSDADMKDSLGGISVGKPAAAVGVGGSGKPEPGAP
AGSSSSVERPEVELSNLVMCSRLSHSQSSLRSSSSLGSVLGDEEGLYADFYGDYCRLFDN
GQDPHSTSLREDVEEASPEPVVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGLF
SQILLPAFFVCVAMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSN
QSPDASPQKIANTLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMC
LDSFTQGVPLSNFVPPPPSPAPSDDPDTHFEDGLWNFTATTPTTVRETVTSPPTLPLFIR
ELVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYG
GLTVGNIQKSVPASFGKKTPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANL
PPGKGNPAAYGITLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVA
EKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAV
LSLFLLYGWSITPIMYPASFCFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLK
LVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAM
TIEGFVGFFITILCQYNFLRKPLRVPVSSQLIEDDDVDVACERRRVLRGDADNDMLKIDN
LTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIG
GNSILRELLRVQQSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEQRVVSWALEKLE
LSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKT
GRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTSSNVKE
VVRFFNRNFPEAVLKERHHTKVQFQLKSDRISLAQVFSKMEQVVGVLGIEDYSVSQTTLD
NVFVNFAKKQSDNLEQQESSPPGGGQSPLQRLLTLLRPRPANTELSALVSEEPEELESDD
DEGLISFEEERVQLSFNTDTVC
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaccagctacagctactgttgtggaagaatgtgtctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccctctggtcctcttcttcatcctgctg
ggcctgcgccagaagaaacctgccatccccgtcaaggaagccttctacagcgcagctccc
ctcacctcagcaggcatcattcccatcatgcagtcgctgtgtcccgatggccagagggac
gagtttggcttcctacagtacaagaactccactgtcacccagttgttggagcggatccgt
gaggtggtgttacagaaccacctgttcacagcagacaggccaggactgggccaggagctg
gagtccctacagcaacacctggagagcctcagcacatcagcagggccctacccactggac
aacaatttcaacaccagccaagggttcacagtagccaatgtgttgaagaaccagtcagtg
ttccatcagttcctggtcaggaatctgtccctccccaatgacaccgccagcctgctgctc
tccactcctgtcaacctcaaagaggtattcaacctgatctttggcctgtaccccagaact
ggaggggggagtagtcacagttctggaggggaaaaagagaccacacatacccctgcagag
aagatacttcaactggaggagaagatgctgggagtcatgcaaagtctggatggtggactg
atccacaaagctttacgagacccaaccaaagcggcccatcggcaggccctactcaaactc
atgtcccaggctttaggcctagcaggaggaggggcaggccagagatacgacccccaggga
ctgaaggaggtggagggtgttctcctgactggtgccatgttggaaatgcttacctgtggg
gaggatgggactagtgagctgagcaagattctattggttcctgagaagcagcagtccctg
ctccaggcctatcacagcgcagcatgtggaggtgggatgggacaaaggactgagcgcttt
ggagagatgagccaggagctccgagagcagatagacacacagagcctcattgacaagctg
cgtctggagccagccaactcctcggcccctctgtcccagtcccacctgggtgctctgctg
aaggacttggctgacgtggagaagctcctcagggatgtagacctgctgtcaggcctggct
cgcctgctccccaagggggcctgtgctggccacatcccccctggggctccagccaacacc
accacttcctggtccctcaacgccaccacttgggggcccaacaccaccgagaacccctgg
gaggagggcggagaggaggggagaggacgagagaaagagaatgtgaaagaagagaaccct
cactcgttttctacctttgtgcagctgtgggcagggctgcagcctattctgtgtgggaac
aacagaatcattgagccagaggctttaaagcaagggaatatgagctctctgggctttacc
agtaaagagcagcgcaatctgggcttactagtgcatctgatgactacaaatcccaagatc
ctctactcccccatcggctcacaggtggacaaagtcattcagaaggccaatgagacattt
gcgtttgtggggaacgtgactcactacgcccgggtgtggctcaacatctctgcccagctc
aggacttatctggaggagggcaagctgcaccaccacctggcctggatgcagcagttgacc
tctgacctacgtggtcacccggaactgctgaatgggacagacagtgatctgctgcgtggg
ttgctggagggcaactacaccctgcccaacacctccaccctgctggagcagctggacacc
attgacaacgccgcctgtggctggacacacttcatgtccaaggtcagtgtggatatcttc
aagggttttccggatgaggacagcatcgtcaactacacactgaaccaagcttaccatgat
aacatctcagtgtttgccagtgtgatattccagaccaacctagatggctccctgcctcct
catgtcctctataagatcaggcagaactccagcttcacagagaaaaccaacgagatccgc
cgggcctactggcgcccagggcccaacacggggggaaagttctatttcctctacggcttt
gtgtggatccaggatatgatggagagagccatcattaacacgtttgtgggccatgacgtg
gtggagcctggaaactatgttcagatgttcccttacccctgctacacaagagacgacttc
ctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtctactctgta
gccatgatgatccaacacattgtggcggagaaggagcaccggctcaaagaggtgatgaag
atgatgggcctgaacaacgcggtccactgggtggcctggttcatcactgggtttgtccag
ttgtccatctcagtgacggccctgacggccatcctgaagtacggtcgggtgctcctccac
agcgacatcttcatcatctggctcttcctctccatctacgccatcgccaccattatgttc
tgcttcctggtgtcagtgatctactccaaggccaagctggcgtcagcgtgtggtgggata
atctacttcctcagctatgtcccatacatgtacgtggccatcagggaggaggtggcccat
gacaagatcacggccttcgagaagtgtatcgcttctcttatgtcgaccacagcgttcggc
ctgggctctaagtactttgccctgtacgaggtggctggggttggtatccagtggcgcacc
atcaaccagtcacctgtagagggcgatgacttcaaccttggcctgtccatgatgatgctc
atcatcgatgctagtgtgtatggagtactcacctggtacatagaggctgtgcatccaggg
atgtatgggctgcctcggccgtggtacttccccctgcagaagtcctattggctgggcagt
gggcgtgtggagacatgggagtgtccctgggggggaggggccaggctgagtgtcatggag
gaggaccaggcgtgtgccatggaacaccggcgatctggtagggccaagcctgaccttgga
cttgaggagatgcgtggtattgaagaggagcccagccacctgcctctggtggtttgtata
gacaagctgaccaaggtctacaagatgggcaataagctggccctcaacaagctgagcctc
aacctccacgagaaccaggtggtgtccttcctgggacacaacggagccggcaagaccacc
actatgtctattctgacaggtctgttcccgcccacctctggctcagccaccatctacggc
catgacatccgtactgacatggagcgtatcaggcagaacctgggcatgtgtccccagcac
aatgtgctctttgacaagctcagcgtggaggagcacctgtggttctactccaaactcaaa
ggcatggccgaggaggacatccgcaaggagatggacaagatgatagacgatctggagttg
aataataagcgtcacagcctggtgcagactctgtctgggggaatgaagaggaagctgtcc
gtggccatagcgtttgtgggcggctcccgggccgtcatcctggatgagcctacggcgggg
gtggacccctatgcacgcagagccatctgggacctcatcctcaagtacaaacagggtcgc
accatcctgctgtccacccaccacatggatgaggctgacctgttaggagaccgcatagcc
atcatctcccatgggaaactcaagtgctgcggctccccactctttctcaagagcacctac
ggagacggctacaaactcaccctggtcaagaaacagagtgagagcggagaccaggtcacc
cagccccagcctccctccactgtgtccccctcctcctccctgtccccctcctcctcctcc
ctttctccctgctcagagacccgggtcacccagttcattcgtcagtttgtggggtcctgt
ctgctgttgtctgactccaacactgaactatcctatgtgttgccctctgaggctgtcaag
aagggctgcttcgagaggctatttcaggcattggagcaaaatctggccatcttggctctg
accagcttcggggtgatggacaccactctggaggaggtcttcctcaaggtgtcggaggag
gaccagtccctggagaacagtgatgccgacatgaaggattccctaggcggtatctcagtg
gggaaacctgctgccgcagtgggtgtggggggctctggaaagccagagccgggggctcct
gcggggagcagcagcagtgtggagaggccagaggtagagctctctaacctggtgatgtgc
tccaggctcagccacagccaatcctccctgcgctcctcctcctccctggggtccgtgctg
ggggatgaggaagggctctatgcagacttctacggagactactgccgcctcttcgacaac
ggacaggaccctcactctaccagcctgagggaggacgtggaggaggcctcccctgagcct
gtcgtcctggaggggcagggcagcttcaagctggagggctggtggctgaagctacgccag
ttccacggcctcatcgtcaagaggttccactgtgccaagaggaacaccaagggcctcttc
tcacagatcctgctgcccgcattcttcgtctgcgtggccatgactgtagcgctctctgtg
ccttccatcggagatctaccaccactgatcctgtccccatcccagtaccacaactacacc
cagccccgtggcaacttcatcccctacgccaacgaagaccgcccacagtacaggagtaac
cagtccccggatgccagccctcagaagatcgccaacacgctgcgtctgccatcgggcgtg
ggcgccacctgcgtcctcaaaacgcccttcaacagcaccctggaccagctggcacagacg
ctcaaccccagcgccaacaacagcaagaccctggccgcccgctactttgactccatgtgt
ctggactccttcacccagggagtgccactgtccaacttcgtaccccctcccccctcgcca
gccccctccgatgaccccgacactcactttgaggatgggctgtggaacttcactgccacc
actcccaccactgtcagggaaacggtgacgtctcctcccaccctgcccctgttcattcgg
gagctggttcgttgtatctgctccatgcaggggacgggcttctcctgccccagcggggtg
ggggggcggccgccccttatgaaggtggtcacaggggacattctggtagacatcactggg
cgcaacgtgtcagagtatctcctctacacctctgacagactgcgcctgcacagatatgga
ggactcacagtaggcaacatacagaaatcagtcccagcatcctttgggaaaaagactccg
cccatggttcgcaaaatagcagtccgccgatcagctcaggtgctgttcaataataaaggg
taccacagcatgccaacctatctcaacgtcctcaacaatgccatcctgcgtgccaacctg
cctccaggcaagggcaaccctgctgcatacggaatcacactgaccaaccaccccatgaac
cgtaccagtgcaagcctctctctggactacttgctccagggcactgatgtggtgatagct
atcttcatcatcgtggccatgtcctttgtaccagccagctttgtggtctttctggtggca
gagaagtcgacaaaggccaagcacctgcagtttgtgtctggatgtgaccctgtcatctac
tggctggctaactatatatgggacatgttgaactacttggtgcctgccacgtgctgtgtc
cttatcctgtttgtctttgaccttcctgcgtacacatccccaaccaacttccctgcggtc
ctgtctctcttcctcctctatgggtggtctatcactcctatcatgtacccggcctccttc
tgtttcgaggtgcccagcacagcctatgtgttcctcatcgtcatcaaccttttcataggc
atcactgccacagtggccaccttcctgctgcagctctttgagcatgacaaggatctgaaa
ctggtgaacagctacctaaagtcctgtttccttatcttcccaaactacaacctgggtcac
ggcctgatggaaatggcctacaacgaatacatcaatgagtactatgctaaaataggtcag
tttgacaagatcaagtctccatttgagtgggacattgtgactcgagggctggtagccatg
acaatcgagggctttgtaggattcttcatcaccatcctgtgtcagtacaacttcctcagg
aaacccttgagagtaccagtgagcagccagctcatagaggatgatgatgtggatgtggcc
tgtgagagacggagagtactgagaggagatgctgacaacgacatgctgaagattgacaac
ctcaccaaggtgtacaagtcgaggaagatgggtcgtatcttggctgttgaccggttgtgt
ctgggcgtgcgtcctggggagtgttttggcctcctgggggtgaacggagcaggaaagacc
accacctttaagatgctaactggtgacgagagcaccacgggaggggaggctttcataggg
ggaaacagtatcctgagggagctgttgagagtgcagcagagcattggttactgccctcag
tttgatgccttgtttgaagacctgacagccagagagcacctggagctgtacacacgcctc
cgaggcatcccctggaaggacgagcagagggtggtctcatgggccctagagaaactggag
ctctccaaatatgcagacaagcccgctggcacctacagtgggggaaacaagcgcaagctg
tctactgccatcgccctcatcggatacccgtctctcattttcctggatgaacctactaca
gggatggaccctaaggcccgcagattcctctggaacctcatccttgatatcatcaagacg
ggacgctctgtggtgctgacgtcacacagtatggaggaatgtgaggctctgtgcaccaga
ctgggcatcatggtcaacggcaggttcaaatgcctgggcagcatccagcacctcaagaac
aggtttggtgatggttacatgatcacagtgcggactaaaaccagttccaatgtgaaggag
gtggtgagattcttcaacaggaatttccctgaggcggtactaaaggagcgtcaccacacc
aaagtccagttccagctgaagtccgacaggatctccctggcccaggtgttcagtaagatg
gagcaggtggtgggggtgctggggatagaggactactctgtcagccagaccacactggac
aatgtgttcgtgaactttgccaagaagcaaagtgacaacctggagcagcaggagagttcc
ccccctggtggaggccagtcacccctgcagcgcctgctcaccctgctgaggccccggccg
gccaatacggagctcagcgccctggtcagcgaagagccggaggaactggagagtgacgac
gatgagggcctcatcagctttgaagaggagagggtgcagctctcctttaacacagatact
gtctgttga
DBGET
integrated database retrieval system
