Oncorhynchus keta (chum salmon): 118394120
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Entry
118394120 CDS
T09424
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118394120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118394120
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118394120
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118394120
NCBI-ProteinID:
XP_052317888
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Position
14:complement(55157071..55210065)
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AA seq
748 aa
AA seq
DB search
MDFSEQREMAKQPANAPTGCNPLHQPEGVSANKPDNAFNQTSAAYPAPQPAQSNESKTFC
PTENKPGEPGEVKVYGTFKNAALPVPGDPLRVTGDQNNASGNWTTMSQTTIILGADGNTS
VQPGAVMWEDESGDENKARGNWTNKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIP
YLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMC
WTLYYLFASLKGSLPWANCKNEWNTLDCKDKDMLLLDTCILHDKNITSVKNSSFCLSAQA
IGNLTKLVNMTFPDNKTYVSPSEEYFKYNVLHISKGIEYPGDIRWPLAGCLLLAWLIVYL
SLAKGIKSSGKVVYFTATFPYVVLVILLFRGVTLPGAGDGILYFITPKWEKLNDAKVWKD
AATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVCIVNSATSIFAGFVIFSVIGFMAH
ELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTS
VSDEFPQYLRKNKPLFTLICCACFFFLGFPMVTENGMYMLQLVDTYAASYSLVIIAICEL
IGISYFYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPTILTGILGLSLYQWKVMTYEDYT
YPTWSMVMGWLMVLCSVIWIPIMFVIKMHLAPGSFTERLKLVCSPQPDWGPFLAKHRGER
YKNMMDPHGSNSLGLKLPPKDFQLGAYQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgagcagagagagatggccaaacagccggccaatgctcctaccggttgt
aacccgttgcaccagccggagggagtttcagcaaacaaaccggataatgcctttaaccaa
acgtccgcagcatacccggcccctcagccagcacaatccaacgagagcaaaactttctgt
cccacggaaaataaaccaggagaaccgggagaagtcaaagtctatgggacgtttaaaaac
gccgctctgccggtgcccggggacccgcttagggtcaccggggatcaaaacaatgcatcg
ggcaactggaccaccatgagccagaccaccatcattctgggcgcagatggcaacacgtct
gttcagcccggcgcggtgatgtgggaggacgagagtggagatgaaaataaggccagggga
aactggactaataaattggatttcatcctgtccatggttggctatgcggtgggactggga
aacgtgtggaggtttccataccttgccttccaaaatggtggaggtgcttttttgatcccc
taccttataatgttgtgcctcgccgggatccctatctttttattggaggtttccctgggt
cagtttgccagccagggccccgtgtccgtgtggaaagccatcccggctctgcaaggttgc
gggattgccatgttgataatatctgtcttgatagccatatactataacattattatgtgc
tggacactgtactacctgttcgcttcgttgaagggctcactgccatgggctaactgtaag
aacgagtggaacacgttggactgtaaggacaaagacatgcttctcttagacacgtgtatc
ctccatgataaaaacatcacctctgtaaagaacagctcgttctgtctgtcggctcaagcc
attggaaacctgaccaaactggttaacatgacctttccggataacaaaacttacgtcagc
cccagcgaggagtacttcaagtacaatgtcttgcacatctccaaagggatagagtaccct
ggagacatccgctggcccctcgcaggctgcctgttgctggcctggttgatagtctacctc
tccctggccaaaggaatcaagtcatcagggaaagtggtgtatttcacagctacgttcccc
tatgtggttctggtcattctgttgttcagaggagtgaccctcccaggggctggtgacggc
atcctctacttcatcacacccaagtgggagaaactcaatgatgctaaggtttggaaggat
gctgccacccagattttcttctctctgtcagcagcctggggaggcctcatcacactttct
tcttacaacaagttccacaacaactgctacagggacaccatcatagtgtgcatagttaac
agtgccaccagtatattcgctgggttcgtcatcttttccgtcattggattcatggcccac
gaactgaaggtgcccattgagaaggtggctgatgaaggtccaggcatagcgttcgtggtg
tacccagaggctctgaccagactcccactctctccgttctgggccatcatcttcttcctc
atgctgctgaccctcggcctggataccatgtttgccaccattgagaccatagtgacgtcg
gtgtcagacgagttcccccagtacctgagaaagaacaagcctctgttcacactcatctgt
tgtgcatgtttcttcttcctgggattccctatggtcacagagaatgggatgtacatgctc
cagttggtggacacatacgctgcctcttactctctggtaatcattgccatctgtgagctg
atcggaatctcctacttctatggcctgcagaggttctgcgaggacattgaaatgatgatt
ggcttccaaccaaaccgcttctggagaatctgctgggcctttgtgactcctaccattctg
actggtatcctggggctgagtctgtaccagtggaaggtgatgacctatgaggactacacc
taccccacctggtccatggtgatgggctggctgatggtgttgtgttctgtcatctggatc
ccaatcatgtttgtcatcaaaatgcacttggccccaggcagctttacagagcgtctgaag
ctggtgtgttcccctcagcccgattggggtcccttcctggccaagcacagaggggagcgc
tacaagaacatgatggacccccatggatccaactccctgggcctcaaactgccccccaaa
gatttccaactgggcgcctaccagtag
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