Oncorhynchus keta (chum salmon): 118394198
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Entry
118394198 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118394198
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118394198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118394198
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
118394198
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118394198
Multi subunit type E3
ERAD complex
118394198
LMBR1L-GP78-UBAC2 complex
118394198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
FANCL_C
Motif
Other DBs
NCBI-GeneID:
118394198
NCBI-ProteinID:
XP_052369403
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTEQGFGVPDMDEPLPPAPLVGDNR
GGLEHVTSDDVVGADTELATTIMWYLVTDSLFVWVLVNTAFCSLMLIAKMIQCMVFGPLR
VSEKQHLKDKFWNFIFYKFIFIFGVLNVQMVEEVVMWCLWFSALVFLHLMVQLCKDRFEY
LSFSPTTSMNSHVRVLTLLVSLLLGCCGLAVVCGLLGAAHGMHTLSFMAAECLLVTVRTG
HVIMRYTIHLWDLNHPGTWESKGSYVYYTDFIMELSMLSLDLMHHIHMLLFGNIWLSMAS
LVIFMQLRYLFHEVQRRIRRHKNYLRVINNMEARFAVATAEELVANNDDCAICWDTMQTA
RKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNISGDGGPARGQQQGAGLPLENNLGPGGP
AADARPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILAIAQQANNSQLNTMAHQIQE
MFPQVPYHLVLQDLQLTRSVEVTTDNILEGRIVVPFPALAAERSPVQVNPGPEEGAGASG
GVDTAPRELNNLEVRGSRFSKSAEERQKMLLQRKDELLQQARRRYLRKSPEDEEDLPTLE
EDAPVSDVTMLRRRTMAAAAERRMQSQPDPAL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctattcctggagaggtttccctggcccagtctgcagacctacacagcgctg
agtgtggctctgctggctggaagcatcttcagcgcctacactactgtaacagaacagggg
tttggggttccagacatggacgagcctctaccacctgcacccttagtaggggataataga
ggcggcctagaacatgtgactagcgatgatgttgtgggtgcagatacagaattggcgacc
actattatgtggtacctggtcactgacagtctctttgtatgggtgttggtgaatacagct
ttctgttccctgatgttaattgctaagatgatccagtgcatggtttttgggccccttcga
gtcagtgagaagcagcaccttaaggacaagttctggaacttcatcttctataagttcatc
tttatcttcggggtgctgaacgttcagatggtggaggaggtggtcatgtggtgtctgtgg
ttctctgccctggtcttcctccacctcatggtccagctgtgcaaggaccgctttgaatac
ctgtccttctcccccactacttctatgaacagccatgtgcgtgtccttaccctactggtg
tccctgctgctgggctgctgtggtctggctgtggtctgtggtctgctgggcgctgcccat
ggcatgcacaccctctccttcatggctgccgagtgtctgctggttactgtgcggactgga
catgtcatcatgaggtacaccattcacctgtgggatctgaaccacccaggcacctgggag
agtaagggttcctacgtctactacactgacttcatcatggagctgtctatgctgtccctg
gaccttatgcaccacattcacatgctgctctttggtaatatctggctgtccatggccagt
ctggtgatcttcatgcagctgaggtatctgttccatgaggtgcagcgccgcatccgacgc
cacaagaactacctccgtgtcatcaacaacatggaggccaggtttgcagtggccacagcc
gaggaactggtagccaacaatgatgactgtgccatctgctgggacaccatgcagacagca
cgtaaactgccctgcggacacctcttccacaattcctgcctgcggtcgtggctggagcag
gacacgtcgtgtccaacatgcaggatgtccctgaacatcagtggtgatggaggcccggcc
agaggccagcagcagggggctggcctcccactggagaacaacctgggccctgggggcccc
gctgcagacgccagaccacacctcaaccaacacaatcacttcttccactttgatggctcc
cgcatcgccagctggctgcctagtttctcagtagaggtgatgcacacaactaacatcctg
gctatcgctcagcaggccaacaactctcagctcaacaccatggcccatcagatccaggag
atgtttcctcaggttccctaccacttggtgctgcaggacctgcagttgacccgctctgtg
gaggtcaccaccgacaacatcctggagggacgcatcgtggtgcccttccctgctctggcg
gctgagcgttcccccgtgcaggtgaacccaggcccagaggagggggcaggagccagtggg
ggggtggacactgctcccagagagctgaacaacctggaggtcagagggagccgtttctcc
aagtctgcagaggagagacagaagatgctgctacagaggaaggatgagctgctgcaacag
gcacgcaggagatacttgagaaagagcccagaggacgaggaggacctgcccactctggag
gaagacgcccctgtctcagacgtgaccatgctgagacgcaggaccatggcagcagctgca
gagagacgcatgcagagccaaccagaccctgctctctga
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